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S5_scaffold_514_curated

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S5_scaffold_514_curated_1
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2..1330)
DNA (1329bp) protein (443aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811};; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
DNA primase n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NES8_MICTS rbh
DNA primase rbh
S5_scaffold_514_curated_2
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1330..2682)
DNA (1353bp) protein (451aa)
deoxyguanosinetriphosphate triphosphohydrolase n=1 Tax=Microbacterium yannicii RepID=UPI0002E170E8 rbh
Deoxyguanosinetriphosphate triphosphohydrolase-like protein {ECO:0000313|EMBL:CDJ99118.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
dgt; dGTP triphosphohydrolase rbh
S5_scaffold_514_curated_3
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2690..3844)
DNA (1155bp) protein (385aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
tRNA-dihydrouridine synthase n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NES6_MICTS rbh
nifR3; tRNA-dihydrouridine synthase rbh
S5_scaffold_514_curated_4
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3898..4410
DNA (513bp) protein (171aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI00031007E8
Glutathione peroxidase {ECO:0000256|RuleBase:RU000499}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
glutathione peroxidase
S5_scaffold_514_curated_5
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4412..5110)
DNA (699bp) protein (233aa)
DSBA oxidoreductase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E344_9MICO rbh
DSBA oxidoreductase {ECO:0000313|EMBL:CDJ99115.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
dithiol-disulfide isomerase rbh
S5_scaffold_514_curated_6
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5165..5980)
DNA (816bp) protein (272aa)
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
UDP pyrophosphate synthase n=1 Tax=Microbacterium sp. 292MF RepID=UPI000374FB6C rbh
uppS; undecaprenyl pyrophosphate synthase rbh
S5_scaffold_514_curated_7
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5977..6705)
DNA (729bp) protein (243aa)
DNA repair protein RecO n=1 Tax=Microbacterium sp. 292MF RepID=UPI00035CC416 rbh
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
recO; recombinational DNA repair protein rbh
S5_scaffold_514_curated_8
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6812..7480
DNA (669bp) protein (223aa)
membrane protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI000380CEF9 rbh
Predicted membrane protein {ECO:0000313|EMBL:CDJ99112.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
hypothetical protein rbh
S5_scaffold_514_curated_9
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7694..9451)
DNA (1758bp) protein (586aa)
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054};; Alpha-IPM synthase {ECO:0000256|HAMAP-Rule:MF_00572}; Alpha-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
2-isopropylmalate synthase n=1 Tax=Microbacterium yannicii RepID=UPI000315DB31 rbh
leuA; isopropylmalate/homocitrate/citramalate synthase rbh
S5_scaffold_514_curated_10
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9587..10246
DNA (660bp) protein (220aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00036C7891
Uncharacterized protein {ECO:0000313|EMBL:CDJ99110.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
hypothetical protein
S5_scaffold_514_curated_11
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10358..11794
DNA (1437bp) protein (479aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002E10A1E
Uncharacterized protein {ECO:0000313|EMBL:CDJ99109.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
HNH endonuclease
S5_scaffold_514_curated_12
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11919..12851)
DNA (933bp) protein (311aa)
GTPase Era n=1 Tax=Microbacterium sp. B19 RepID=UPI000347E3A3 rbh
GTPase Era {ECO:0000256|HAMAP-Rule:MF_00367, ECO:0000256|SAAS:SAAS00085723}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
era; GTPase rbh
S5_scaffold_514_curated_13
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12844..14199)
DNA (1356bp) protein (452aa)
CBS domain containing protein n=2 Tax=Microbacterium RepID=H8E337_9MICO rbh
Uncharacterized protein {ECO:0000313|EMBL:CDJ99107.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
hemolysins rbh
S5_scaffold_514_curated_14
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14196..14669)
DNA (474bp) protein (158aa)
Endoribonuclease YbeY {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023089}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023108};; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
Endoribonuclease YbeY n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E336_9MICO
metal-dependent hydrolase
S5_scaffold_514_curated_15
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14666..15799)
DNA (1134bp) protein (378aa)
Phosphate starvation protein PhoH n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KJR3_9MICO rbh
Putative enzyme with nucleoside triphosphate hydrolase domain {ECO:0000313|EMBL:CDJ99105.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
phoH; phosphate starvation-inducible protein PhoH, ATPase rbh
S5_scaffold_514_curated_16
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15792..16142)
DNA (351bp) protein (117aa)
HIT family hydrolase n=1 Tax=Microbacterium sp. B19 RepID=UPI0003B66FC7
Uncharacterized protein {ECO:0000313|EMBL:CDJ99104.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolase
S5_scaffold_514_curated_17
Microbacterium oleivorans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16182..16919)
DNA (738bp) protein (246aa)
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=273677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oleivorans.;"
hypothetical protein n=1 Tax=Microbacterium RepID=UPI0003786DB9 rbh
hypothetical protein rbh
S5_scaffold_514_curated_18
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16919..18028)
DNA (1110bp) protein (370aa)
molecular chaperone DnaJ n=1 Tax=Microbacterium yannicii RepID=UPI0002EE8882 rbh
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
dnaJ; DnaJ-class molecular chaperone with C-terminal Zn finger domain rbh
S5_scaffold_514_curated_19
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18077..19117)
DNA (1041bp) protein (347aa)
Heat-inducible transcription repressor hrcA n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KW49_9MICO rbh
Heat-inducible transcription repressor HrcA {ECO:0000256|HAMAP-Rule:MF_00081, ECO:0000256|SAAS:SAAS00101987}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
transcriptional regulator of heat shock gene rbh
S5_scaffold_514_curated_20
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19211..20428)
DNA (1218bp) protein (406aa)
Putative oxygen-independent coproporphyrinogen-III oxidase {ECO:0000313|EMBL:CDJ99970.1}; EC=1.3.99.22 {ECO:0000313|EMBL:CDJ99970.1};; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
coproporphyrinogen III oxidase n=1 Tax=Microbacterium paraoxydans RepID=UPI00036CE731 rbh
hemN; coproporphyrinogen III oxidase rbh
S5_scaffold_514_curated_21
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20430..21083)
DNA (654bp) protein (218aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0003153A9A rbh
Uncharacterized protein {ECO:0000313|EMBL:CDJ99971.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
hypothetical protein
S5_scaffold_514_curated_22
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21090..22946)
DNA (1857bp) protein (619aa)
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP-Rule:MF_00071}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
lepA; GTP-binding protein LepA; K03596 GTP-binding protein LepA id=7721919 bin=CNBR_ACT species=Clavibacter michiganensis genus=Clavibacter taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria rbh
lepA; GTP-binding protein LepA rbh
S5_scaffold_514_curated_23
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23187..27980
DNA (4794bp) protein (1598aa)
hypothetical protein n=1 Tax=Microbacterium paraoxydans RepID=UPI00037E35F9 rbh
5'-Nucleotidase domain protein {ECO:0000313|EMBL:CDJ99973.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
5'-nucleotidase rbh
S5_scaffold_514_curated_24
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28178..28969
DNA (792bp) protein (264aa)
Putative hydrolase n=1 Tax=Microbacterium sp. TS-1 RepID=U2X642_9MICO rbh
Predicted hydrolase or acyltransferase {ECO:0000313|EMBL:CDJ99974.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
hydrolase or acyltransferase rbh
S5_scaffold_514_curated_25
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


28996..29352
DNA (357bp) protein (119aa)
30S ribosomal protein S20 n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E324_9MICO
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
rpsT; ribosomal protein S20
S5_scaffold_514_curated_26
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29459..30514)
DNA (1056bp) protein (352aa)
DNA polymerase III subunit delta n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003813ED1 rbh
DNA polymerase III, delta subunit {ECO:0000313|EMBL:CDJ99976.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
DNA polymerase III, delta subunit rbh
S5_scaffold_514_curated_27
unknown

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30705..31187
DNA (483bp) protein (161aa)

This feature has no annotations

S5_scaffold_514_curated_28
unknown

Not on your lists

31999..32181
DNA (183bp) protein (61aa)

This feature has no annotations

S5_scaffold_514_curated_29
Equid herpesvirus 8, Varicellovirus, Herpesvirales, Viruses

Not on your lists

32194..32988
DNA (795bp) protein (265aa)
Envelope glycoprotein J n=1 Tax=Equid herpesvirus 8 RepID=I1V8I5_9ALPH
Envelope glycoprotein J {ECO:0000313|EMBL:AFI33207.1}; TaxID=39637 species="Viruses; dsDNA viruses, no RNA stage; Herpesvirales; Herpesviridae; Alphaherpesvirinae; Varicellovirus.;" source="Equid herpesvirus 8.;"
LPXTG-motif cell wall anchor domain-containing protein
S5_scaffold_514_curated_30
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33017..33694)
DNA (678bp) protein (226aa)
Putative DNA uptake protein n=1 Tax=Microbacterium sp. TS-1 RepID=U2XIU4_9MICO
Competence protein ComEA helix-hairpin-helix repeat protein {ECO:0000313|EMBL:CDJ99978.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
DNA uptake protein
Displaying items 1-30 of 38 in total

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