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S5_scaffold_293_curated

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Displaying items 1-30 of 52 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S5_scaffold_293_curated_1
unknown

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comp(3..149)
DNA (147bp) protein (49aa)
hypothetical protein n=1 Tax=Corynebacterium-like bacterium B27 RepID=UPI0003B5322B
S5_scaffold_293_curated_2
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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481..1125
DNA (645bp) protein (215aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI000308E210
Putative DNA polymerase III, gamma/tau subunit protein {ECO:0000313|EMBL:CDJ99728.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
DNA polymerase III, gamma/tau subunits
S5_scaffold_293_curated_3
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1122..1457
DNA (336bp) protein (112aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI00031AEC9B
Uncharacterized bacitracin resistance protein {ECO:0000313|EMBL:CDJ99729.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
bacitracin resistance protein
S5_scaffold_293_curated_4
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1759..3348
DNA (1590bp) protein (530aa)
D-3-phosphoglycerate dehydrogenase {ECO:0000313|EMBL:CDJ99730.1}; EC=1.1.1.95 {ECO:0000313|EMBL:CDJ99730.1};; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
D-3-phosphoglycerate dehydrogenase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E494_9MICO rbh
serA; phosphoglycerate dehydrogenase rbh
S5_scaffold_293_curated_5
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(3416..3961)
DNA (546bp) protein (182aa)
Regulatory protein TetR n=2 Tax=Microbacterium RepID=H8E495_9MICO
Transcriptional regulator {ECO:0000313|EMBL:KIC57650.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
transcriptional regulator
S5_scaffold_293_curated_6
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4050..5657
DNA (1608bp) protein (536aa)
MFS transporter n=1 Tax=Microbacterium yannicii RepID=UPI00031A54F8 rbh
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:CDJ98833.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
permease of the major facilitator superfamily rbh
S5_scaffold_293_curated_7
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5620..6666
DNA (1047bp) protein (349aa)
3-isopropylmalate dehydrogenase {ECO:0000313|EMBL:CDJ98832.1}; EC=1.1.1.85 {ECO:0000313|EMBL:CDJ98832.1};; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
3-isopropylmalate dehydrogenase n=1 Tax=Microbacterium sp. TS-1 RepID=U2XIU1_9MICO rbh
leuB; isocitrate/isopropylmalate dehydrogenase rbh
S5_scaffold_293_curated_8
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6772..7893
DNA (1122bp) protein (374aa)
Branched-chain-amino-acid aminotransferase {ECO:0000313|EMBL:CDJ98831.1}; EC=2.6.1.42 {ECO:0000313|EMBL:CDJ98831.1};; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
branched-chain amino acid aminotransferase n=1 Tax=Microbacterium yannicii RepID=UPI00037B7A5C rbh
ilvE; branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase rbh
S5_scaffold_293_curated_9
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8019..8783
DNA (765bp) protein (255aa)
Fumarylacetoacetate (FAA) hydrolase n=2 Tax=Microbacterium RepID=H8E499_9MICO rbh
Uncharacterized protein {ECO:0000313|EMBL:CDJ98830.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase rbh
S5_scaffold_293_curated_10
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8790..10043
DNA (1254bp) protein (418aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00035DA4DB rbh
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:CDJ98829.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
permease of the major facilitator superfamily rbh
S5_scaffold_293_curated_11
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10254..11777
DNA (1524bp) protein (508aa)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
Glutamate--tRNA ligase n=1 Tax=Microbacterium sp. TS-1 RepID=U2YQS2_9MICO rbh
gltX; glutamyl- and glutaminyl-tRNA synthetase rbh
S5_scaffold_293_curated_trna_1
unknown

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11844..11915
DNA (72bp)
transferRNA Gln
S5_scaffold_293_curated_12
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12024..12602)
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Agrococcus pavilionensis RW1 RepID=U1LLD4_9MICO
Transcriptional regulator {ECO:0000313|EMBL:CDJ98827.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
transcriptional regulator
S5_scaffold_293_curated_13
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12711..15227
DNA (2517bp) protein (839aa)
RND transporter n=1 Tax=Leucobacter chromiiresistens RepID=UPI000262A68E rbh
Predicted drug exporters of the RND superfamily {ECO:0000313|EMBL:CDJ98826.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
drug exporters of the RND superfamily rbh
S5_scaffold_293_curated_14
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15356..16987)
DNA (1632bp) protein (544aa)
hypothetical protein n=1 Tax=Promicromonospora sukumoe RepID=UPI0003721B73 rbh
ABC transporter related protein {ECO:0000313|EMBL:CDJ98825.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
ABC transporter rbh
S5_scaffold_293_curated_15
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17538..17693
DNA (156bp) protein (52aa)
Uncharacterized protein {ECO:0000313|EMBL:CDK00301.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
S5_scaffold_293_curated_16
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17830..19881)
DNA (2052bp) protein (684aa)
hypothetical protein n=1 Tax=Corynebacterium-like bacterium B27 RepID=UPI0003B6B026 rbh
Uncharacterized protein {ECO:0000313|EMBL:CDK00300.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
hypothetical protein
S5_scaffold_293_curated_17
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20072..20845
DNA (774bp) protein (258aa)
hypothetical protein n=1 Tax=Corynebacterium-like bacterium B27 RepID=UPI0003B67D23 rbh
Uncharacterized protein {ECO:0000313|EMBL:CDK00299.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
hypothetical protein
S5_scaffold_293_curated_18
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20999..22297)
DNA (1299bp) protein (433aa)
Permease protein, putative n=1 Tax=marine actinobacterium PHSC20C1 RepID=A4AI99_9ACTN rbh
Putative Permease protein {ECO:0000313|EMBL:CDK00298.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
peptide ABC transporter permease rbh
S5_scaffold_293_curated_19
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22294..22989)
DNA (696bp) protein (232aa)
Uncharacterized ABC transporter ATP-binding protein YknY {ECO:0000313|EMBL:CDK00297.1}; EC=3.6.3.- {ECO:0000313|EMBL:CDK00297.1};; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
ABC transporter, ATP-binding protein n=1 Tax=marine actinobacterium PHSC20C1 RepID=A4AI98_9ACTN rbh
peptide ABC transporter ATPase rbh
S5_scaffold_293_curated_20
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23171..24490
DNA (1320bp) protein (440aa)
signal transduction histidine kinase n=1 Tax=Salinibacterium sp. PAMC 21357 RepID=UPI000287A86A rbh
Signal transduction histidine kinase {ECO:0000313|EMBL:CDK00296.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
signal transduction histidine kinase
S5_scaffold_293_curated_21
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24600..25385
DNA (786bp) protein (262aa)
D-beta-D-heptose 1-phosphate adenosyltransferase n=1 Tax=Microbacterium sp. B19 RepID=UPI0003B5A001
Transcriptional regulator of sugar metabolism {ECO:0000313|EMBL:CDK00293.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
transcriptional regulator of sugar metabolism
S5_scaffold_293_curated_22
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25382..26377
DNA (996bp) protein (332aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI00036C761D rbh
Fructose-1-phosphate kinase {ECO:0000313|EMBL:CDK00292.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
fruK; 1-phosphofructokinase rbh
S5_scaffold_293_curated_23
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26389..28476
DNA (2088bp) protein (696aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003740435 rbh
Phosphotransferase system, fructose-specific IIC component {ECO:0000313|EMBL:CDK00291.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
fruA; phosphotransferase system, fructose-specific IIC component rbh
S5_scaffold_293_curated_24
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28561..29226)
DNA (666bp) protein (222aa)
Putative uncharacterized protein n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5BVJ6_BEUC1
Uncharacterized protein {ECO:0000313|EMBL:CDK00290.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
hypothetical protein
S5_scaffold_293_curated_25
Kineococcus radiotolerans, Kineococcus, Kineosporiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29241..29825)
DNA (585bp) protein (195aa)
TetR family transcriptional regulator n=1 Tax=Agromyces subbeticus RepID=UPI0003B6DB19
TetR family transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ABS04092.1}; TaxID=266940 species="Bacteria; Actinobacteria; Kineosporiales; Kineosporiaceae; Kineococcus.;" source="Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 /; SRS30216).;"
S5_scaffold_293_curated_26
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29926..30666
DNA (741bp) protein (247aa)
oxidoreductase n=1 Tax=Agromyces subbeticus RepID=UPI0003B754E3 rbh
Aldehyde dehydrogenase {ECO:0000313|EMBL:KDA05337.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
aldehyde dehydrogenase
S5_scaffold_293_curated_27
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30694..31119)
DNA (426bp) protein (142aa)
Uncharacterized protein {ECO:0000313|EMBL:CDK00289.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
S5_scaffold_293_curated_28
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31128..31766)
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KCW1_9MICO rbh
Zn-dependent hydrolase of the beta-lactamase fold-containing protein {ECO:0000313|EMBL:CDK00288.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
putative Zn-dependant hydrolase rbh
S5_scaffold_293_curated_trna_2
unknown

Not on your lists

31875..31947
DNA (73bp)
transferRNA Glu
Displaying items 1-30 of 52 in total

View Taxonomy