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S5_scaffold_750_curated

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S5_scaffold_750_curated_1
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..1395
DNA (1395bp) protein (465aa)
N-formimino-L-glutamate deiminase n=1 Tax=Mesorhizobium sp. WSM4349 RepID=UPI00037F6CDC rbh
N-formimino-L-glutamate deiminase {ECO:0000313|EMBL:KGT75502.1}; TaxID=375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum.;"
N-formimino-L-glutamate deiminase rbh
S5_scaffold_750_curated_2
Bradyrhizobium sp. WSM1253, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1392..2120
DNA (729bp) protein (243aa)
Histidine utilization repressor n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QQ87_9BRAD rbh
Histidine utilization repressor {ECO:0000313|EMBL:EIG61943.1}; TaxID=319003 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM1253.;"
GntR family transcriptional regulator
S5_scaffold_750_curated_3
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2226..3170
DNA (945bp) protein (315aa)
ABC transporter permease n=1 Tax=Bradyrhizobium japonicum RepID=UPI0003736CB2 rbh
ABC transporter substrate-binding protein {ECO:0000313|EMBL:AHY53325.1}; TaxID=476282 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum SEMIA 5079.;"
ABC transporter substrate-binding protein rbh
S5_scaffold_750_curated_4
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4349..4693
DNA (345bp) protein (115aa)
(4Fe-4S)-binding protein n=1 Tax=Humibacter albus RepID=UPI0003B573B2
4Fe-4S ferredoxin
4Fe-4S ferredoxin iron-sulfur binding domain protein {ECO:0000313|EMBL:ACV79962.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
S5_scaffold_750_curated_5
Gordonia soli, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4799..6145
DNA (1347bp) protein (449aa)
glutamate dehydrogenase n=1 Tax=Humibacter albus RepID=UPI0003B52825 rbh
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=1223545 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia soli NBRC 108243.;"
glutamate dehydrogenase rbh
S5_scaffold_750_curated_6
Bifidobacterium psychraerophilum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6160..6525
DNA (366bp) protein (122aa)
hypothetical protein n=1 Tax=Pseudoclavibacter faecalis RepID=UPI0003610446
Putative transcriptional regulator, MarR family {ECO:0000313|EMBL:KFI82447.1}; TaxID=218140 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium psychraerophilum.;"
putative transcriptional regulator, MarR family
S5_scaffold_750_curated_7
Leifsonia xyli, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6528..6989
DNA (462bp) protein (154aa)
hypothetical protein n=1 Tax=Humibacter albus RepID=UPI0003B402AA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGW41765.1}; TaxID=1389489 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia xyli subsp. cynodontis DSM 46306.;"
S5_scaffold_750_curated_8
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7143..8195
DNA (1053bp) protein (351aa)
2-nitropropane dioxygenase n=1 Tax=Humibacter albus RepID=UPI0003B4BE7D rbh
2-nitropropane dioxygenase {ECO:0000313|EMBL:KDA07001.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
dioxygenase rbh
S5_scaffold_750_curated_9
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8508..9071)
DNA (564bp) protein (188aa)
hypothetical protein n=1 Tax=Streptomyces scabrisporus RepID=UPI00035EDA3D
TetR family transcriptional regulator
Putative transcriptional regulator, TetR family {ECO:0000313|EMBL:ACZ85691.1}; TaxID=479432 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
S5_scaffold_750_curated_10
Nocardia brasiliensis, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9144..9383
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Nocardia brasiliensis ATCC 700358 RepID=K0F0Z8_9NOCA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU01356.1}; TaxID=1133849 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia brasiliensis ATCC 700358.;"
S5_scaffold_750_curated_11
Gordonia paraffinivorans, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9416..9721
DNA (306bp) protein (102aa)
Putative transposase n=1 Tax=Gordonia paraffinivorans NBRC 108238 RepID=M3V7Q0_9ACTO
Putative transposase {ECO:0000313|EMBL:GAC86327.1}; TaxID=1223543 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia paraffinivorans NBRC 108238.;"
transposase
S5_scaffold_750_curated_12
Gordonia paraffinivorans, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9718..10593
DNA (876bp) protein (292aa)
Putative transposase n=1 Tax=Gordonia paraffinivorans NBRC 108238 RepID=M3VGV6_9ACTO rbh
Putative transposase {ECO:0000313|EMBL:GAC86328.1}; TaxID=1223543 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia paraffinivorans NBRC 108238.;"
integrase
S5_scaffold_750_curated_13
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10693..11628
DNA (936bp) protein (312aa)
resolvase n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B30D0C
Uncharacterized protein {ECO:0000313|EMBL:EXJ51498.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
resolvase domain-containing protein
S5_scaffold_750_curated_trna_1
unknown

Not on your lists

comp(11594..11667)
DNA (74bp)
transferRNA Pro
S5_scaffold_750_curated_14
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11863..12441
DNA (579bp) protein (193aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI000363F2AE
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:CDJ99358.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
hypothetical protein
S5_scaffold_750_curated_15
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12514..13230
DNA (717bp) protein (239aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI000378CA05
Uncharacterized protein {ECO:0000313|EMBL:CDJ99357.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
hypothetical protein
S5_scaffold_750_curated_16
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13227..13610
DNA (384bp) protein (128aa)
Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8N9H1_MICTS
ribosome-associated heat shock protein implicated in the recycling of the 50S subunit
Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit {ECO:0000313|EMBL:BAJ73218.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
S5_scaffold_750_curated_17
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13728..14591
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NE46_MICTS
HNH endonuclease {ECO:0000313|EMBL:CDJ99562.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
hypothetical protein
S5_scaffold_750_curated_18
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15007..15375)
DNA (369bp) protein (123aa)
glyoxalase n=1 Tax=Gordonia kroppenstedtii RepID=UPI000362DA55
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:CDK00458.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
glyoxalase/bleomycin resistance protein/dioxygenase
S5_scaffold_750_curated_19
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15439..15885
DNA (447bp) protein (149aa)
MarR family transcriptional regulator n=1 Tax=Nonomuraea coxensis RepID=UPI000379B77A
Uncharacterized protein {ECO:0000313|EMBL:CDK00457.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
MarR family transcriptional regulator
S5_scaffold_750_curated_20
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15899..16807)
DNA (909bp) protein (303aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003751CF1 rbh
NTP pyrophosphohydrolase including oxidative damage repair enzyme {ECO:0000313|EMBL:CDK00456.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
NTP pyrophosphohydrolase including oxidative damage repair enzyme rbh
S5_scaffold_750_curated_21
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16854..18377)
DNA (1524bp) protein (508aa)
GTP-binding protein Der n=1 Tax=Microbacterium barkeri RepID=UPI000318D305 rbh
GTPase Der {ECO:0000256|HAMAP-Rule:MF_00195, ECO:0000256|RuleBase:RU004481}; GTP-binding protein EngA {ECO:0000256|HAMAP-Rule:MF_00195}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
engA; GTPase rbh
S5_scaffold_750_curated_22
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18374..19093)
DNA (720bp) protein (240aa)
Cytidylate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; Short=CK {ECO:0000256|HAMAP-Rule:MF_00238};; EC=2.7.4.25 {ECO:0000256|HAMAP-Rule:MF_00238};; Cytidine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003689CB9 rbh
cmk; cytidylate kinase rbh
S5_scaffold_750_curated_23
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19086..20201)
DNA (1116bp) protein (372aa)
prephenate dehydrogenase n=1 Tax=Microbacterium sp. 292MF RepID=UPI00035F6412 rbh
Prephenate dehydrogenase {ECO:0000313|EMBL:CDK00453.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
tyrA; prephenate dehydrogenase rbh
S5_scaffold_750_curated_24
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20211..21026)
DNA (816bp) protein (272aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
RNA pseudouridine synthase n=1 Tax=Microbacterium paraoxydans RepID=UPI000381B6B8 rbh
rsuA; 16S rRNA uridine-516 pseudouridylate synthase rbh
S5_scaffold_750_curated_25
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21032..21607)
DNA (576bp) protein (192aa)
segregation and condensation protein B n=1 Tax=Microbacterium sp. B19 RepID=UPI00034CEA9B
Segregation and condensation protein B {ECO:0000256|SAAS:SAAS00086417}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
transcriptional regulator containing the HTH domain
S5_scaffold_750_curated_26
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21597..22427)
DNA (831bp) protein (277aa)
chromosome segregation protein ScpA n=1 Tax=Microbacterium sp. 11MF RepID=UPI00036DF79E rbh
Chromosome segregation and condensation protein ScpA {ECO:0000313|EMBL:CDK00450.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
hypothetical protein rbh
S5_scaffold_750_curated_27
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22411..23298)
DNA (888bp) protein (296aa)
Cobyrinic acid ac-diamide synthase n=2 Tax=Microbacterium RepID=H8E9V0_9MICO rbh
Uncharacterized protein {ECO:0000313|EMBL:CDK00449.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
parA; ATPase rbh
S5_scaffold_750_curated_28
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23407..24339)
DNA (933bp) protein (311aa)
tyrosine recombinase XerD n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003803AC7 rbh
Tyrosine recombinase XerD {ECO:0000256|HAMAP-Rule:MF_01807}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
xerD; site-specific recombinase XerD rbh
S5_scaffold_750_curated_29
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24366..24968)
DNA (603bp) protein (201aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI000365DAAF
NTP pyrophosphohydrolase including oxidative damage repair enzyme {ECO:0000313|EMBL:CDK00447.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
NUDIX hydrolase
Displaying items 1-30 of 37 in total

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