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S5_scaffold_664_curated

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S5_scaffold_664_curated_1
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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3..836
DNA (834bp) protein (278aa)
Hydroxymethylbilane synthase {ECO:0000256|SAAS:SAAS00018413}; EC=2.5.1.61 {ECO:0000256|SAAS:SAAS00018413};; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
Porphobilinogen deaminase n=1 Tax=Microbacterium maritypicum MF109 RepID=T5L1C5_9MICO rbh
porphobilinogen deaminase
S5_scaffold_664_curated_2
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

833..1639
DNA (807bp) protein (269aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00035D1197 rbh
Uroporphyrinogen III synthase HEM4 {ECO:0000313|EMBL:CDK01380.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
uroporphyrinogen-III synthase rbh
S5_scaffold_664_curated_3
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1636..2622
DNA (987bp) protein (329aa)
Delta-aminolevulinic acid dehydratase {ECO:0000256|RuleBase:RU000515}; EC=4.2.1.24 {ECO:0000256|RuleBase:RU000515};; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
Delta-aminolevulinic acid dehydratase n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NC01_MICTS rbh
hemB; delta-aminolevulinic acid dehydratase rbh
S5_scaffold_664_curated_4
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2640..3968
DNA (1329bp) protein (443aa)
Glutamate-1-semialdehyde 2,1-aminomutase {ECO:0000256|HAMAP-Rule:MF_00375, ECO:0000256|SAAS:SAAS00088818}; Short=GSA {ECO:0000256|HAMAP-Rule:MF_00375};; EC=5.4.3.8 {ECO:0000256|HAMAP-Rule:MF_00375, ECO:0000256|SAAS:SAAS00088818};; Glutamate-1-semialdehyde aminotransferase {ECO:0000256|HAMAP-Rule:MF_00375}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
glutamate-1-semialdehyde aminotransferase n=1 Tax=Microbacterium sp. B19 RepID=UPI0003455E10 rbh
glutamate-1-semialdehyde aminotransferase rbh
S5_scaffold_664_curated_5
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4154..4543
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NCH6_MICTS
Uncharacterized protein {ECO:0000313|EMBL:CDK01383.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
hypothetical protein
S5_scaffold_664_curated_6
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4568..5389)
DNA (822bp) protein (274aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00036E8C37 rbh
Uncharacterized protein {ECO:0000313|EMBL:CDK01384.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
hypothetical protein rbh
S5_scaffold_664_curated_7
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5386..6627)
DNA (1242bp) protein (414aa)
ABC-type multidrug transport system, ATPase component n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NCH9_MICTS rbh
ABC-type multidrug transport system, ATPase component {ECO:0000313|EMBL:CDK01385.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
multidrug ABC transporter ATPase rbh
S5_scaffold_664_curated_8
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6724..7791
DNA (1068bp) protein (356aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003656639 rbh
Enoyl-CoA hydratase/isomerase {ECO:0000313|EMBL:CDK01750.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
enoyl-CoA hydratase/carnithine racemase rbh
S5_scaffold_664_curated_9
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7846..8751
DNA (906bp) protein (302aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A7N7_9MICO rbh
Uncharacterized protein {ECO:0000313|EMBL:CDK01749.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
hypothetical protein rbh
S5_scaffold_664_curated_10
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8748..9278
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XJB0_MICPN
Uncharacterized protein {ECO:0000313|EMBL:CDK01748.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
hypothetical protein
S5_scaffold_664_curated_11
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9346..10284
DNA (939bp) protein (313aa)
Molecular chaperone DnaJ n=1 Tax=Microbacterium sp. TS-1 RepID=U2XMA6_9MICO rbh
Heat shock protein DnaJ domain protein {ECO:0000313|EMBL:CDK01747.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
molecular chaperone DnaJ rbh
S5_scaffold_664_curated_12
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10318..11823)
DNA (1506bp) protein (502aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003650B77 rbh
D-alanyl-D-alanine carboxypeptidase {ECO:0000313|EMBL:CDK01746.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
D-alanyl-D-alanine carboxypeptidase rbh
S5_scaffold_664_curated_13
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11956..12597
DNA (642bp) protein (214aa)
ABC transporter permease protein n=1 Tax=Microbacterium sp. TS-1 RepID=U2YM28_9MICO rbh
ABC-type thiamin-related transport system,permease component 1 {ECO:0000313|EMBL:CDK01745.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
ABC transporter permease
S5_scaffold_664_curated_14
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12599..14113
DNA (1515bp) protein (505aa)
Putative HMP/thiamine import ATP-binding protein YkoD {ECO:0000313|EMBL:KJL24152.1}; EC=3.6.3.- {ECO:0000313|EMBL:KJL24152.1};; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034CA77A rbh
putative ABC transporter ATP-binding protein rbh
S5_scaffold_664_curated_15
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14110..14925
DNA (816bp) protein (272aa)
ABC transporter n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034D148D rbh
ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:CDJ99886.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
ABC-type cobalt transport system
S5_scaffold_664_curated_16
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15060..15851
DNA (792bp) protein (264aa)
Putative 3-hydroxyacyl-CoA dehydrogenase (Short-chain) {ECO:0000313|EMBL:CDJ99887.1}; EC=1.1.1.35 {ECO:0000313|EMBL:CDJ99887.1};; EC=1.1.1.351 {ECO:0000313|EMBL:CDJ99887.1};; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
3-hydroxy-2-methylbutyryl-CoA dehydrogenase n=1 Tax=Microbacterium yannicii RepID=UPI0002E55CD1 rbh
dehydrogenase with different specificities rbh
S5_scaffold_664_curated_17
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15988..16785
DNA (798bp) protein (266aa)
Enoyl-CoA hydratase/isomerase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E117_9MICO rbh
Enoyl-CoA hydratase/isomerase {ECO:0000313|EMBL:CDJ99888.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
enoyl-CoA hydratase/carnithine racemase rbh
S5_scaffold_664_curated_18
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16782..17621
DNA (840bp) protein (280aa)
short-chain dehydrogenase n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI0003462BDE rbh
Dehydrogenase with different specificities {ECO:0000313|EMBL:CDJ99889.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
dehydrogenase with different specificities rbh
S5_scaffold_664_curated_19
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17631..18143
DNA (513bp) protein (171aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI000367A140
Predicted NTP pyrophosphohydrolase {ECO:0000313|EMBL:CDJ99890.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
NTP pyrophosphohydrolase
S5_scaffold_664_curated_20
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18156..18665)
DNA (510bp) protein (170aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI000311B321
Histone acetyltransferase HPA2 {ECO:0000313|EMBL:CDJ99891.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
histone acetyltransferase HPA2
S5_scaffold_664_curated_21
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18691..19920
DNA (1230bp) protein (410aa)
Probable dual-specificity RNA methyltransferase RlmN {ECO:0000256|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000256|HAMAP-Rule:MF_01849};; 23S rRNA (adenine(2503)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; 23S rRNA m2A2503 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; Ribosomal RNA large subunit methyltransferase N {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA (adenine(37)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA m2A37 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
50S rRNA methyltransferase n=1 Tax=Microbacterium barkeri RepID=UPI0003147281 rbh
Fe-S-cluster redox enzyme rbh
S5_scaffold_664_curated_22
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20075..21085
DNA (1011bp) protein (337aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A7R7_9MICO rbh
Aldo/keto reductase {ECO:0000313|EMBL:CDJ99894.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
oxidoreductase rbh
Displaying 22 items

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