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S5_scaffold_386_curated

Search features with annotation key words

Displaying items 1-30 of 74 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S5_scaffold_386_curated_1
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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1..1572
-----------------
DNA (1572bp)
protein (524aa)
Phosphoenolpyruvate-protein phosphotransferase {ECO:0000256|PIRNR:PIRNR000732}; EC=2.7.3.9 {ECO:0000256|PIRNR:PIRNR000732};; Phosphotransferase system, enzyme I {ECO:0000256|PIRNR:PIRNR000732}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
Phosphoenolpyruvate-protein phosphotransferase n=1 Tax=Microbacterium sp. TS-1 RepID=U2YRJ2_9MICO rbh
ptsI; phosphoenolpyruvate-protein kinase rbh
S5_scaffold_386_curated_2
Microbacterium oleivorans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1572..3131
-----------------
DNA (1560bp)
protein (520aa)
mtlB; PTS system, mannitol-specific IIBC component (EC:2.7.1.69) rbh
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003641BE2 rbh
Putative EIICBA-Mtl {ECO:0000313|EMBL:EZP26079.1}; TaxID=273677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oleivorans.;"
S5_scaffold_386_curated_3
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3227..3667
-----------------
DNA (441bp)
protein (147aa)
Mannitol-specific phosphotransferase enzyme IIA component {ECO:0000313|EMBL:CDJ98858.1}; EC=2.7.1.- {ECO:0000313|EMBL:CDJ98858.1};; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
Mannitol/fructose-specific phosphotransferasesystem, IIA domain n=1 Tax=Microbacterium sp. TS-1 RepID=U2XCG6_9MICO
mtlD; mannitol/fructose-specific phosphotransferase system, IIA domain
S5_scaffold_386_curated_4
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3664..4815
-----------------
DNA (1152bp)
protein (384aa)
Mannitol-1-phosphate 5-dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00196, ECO:0000256|SAAS:SAAS00015323}; EC=1.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00196, ECO:0000256|SAAS:SAAS00015317};; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
mannitol-1-phosphate 5-dehydrogenase n=1 Tax=Microbacterium sp. 292MF RepID=UPI000367E7E3 rbh
mtlD; mannitol-1-phosphate/altronate dehydrogenase rbh
S5_scaffold_386_curated_5
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4901..5848
-----------------
DNA (948bp)
protein (316aa)
FAD-binding protein n=1 Tax=Cellulomonas sp. JC225 RepID=UPI0002FF23E7 rbh
Siderophore-interacting protein {ECO:0000313|EMBL:CDJ98860.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
FAD-binding 9 siderophore-interacting domain-containing protein rbh
S5_scaffold_386_curated_6
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5941..6975
-----------------
DNA (1035bp)
protein (345aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00036179AD rbh
Periplasmic binding protein {ECO:0000313|EMBL:CDJ98861.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
Fe3+-hydroxamate ABC transporter periplasmic protein rbh
S5_scaffold_386_curated_7
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7006..8031
-----------------
DNA (1026bp)
protein (342aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002DB847B rbh
Iron-enterobactin transporter subunit membrane component of ABC superfamily {ECO:0000313|EMBL:CDJ98862.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
ABC-type Fe3+-siderophore transport system, permease component rbh
S5_scaffold_386_curated_8
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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8028..9053
-----------------
DNA (1026bp)
protein (342aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002D341A8 rbh
Putative FecCD-family membrane transport protein {ECO:0000313|EMBL:CDJ98863.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
transporter permease rbh
S5_scaffold_386_curated_9
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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9050..9856
-----------------
DNA (807bp)
protein (269aa)
iron-dicitrate ABC transporter ATP-binding protein n=1 Tax=Humibacter albus RepID=UPI0003B47B32 rbh
Iron-enterobactin transporter subunit ATP-binding component of ABC superfamily {ECO:0000313|EMBL:CDJ98864.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
iron-dicitrate ABC transporter ATP-binding protein
S5_scaffold_386_curated_10
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(9849..11042)
-----------------
DNA (1194bp)
protein (398aa)
Major facilitator superfamily MFS_1 n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E590_9MICO rbh
Major Facilitator Superfamily protein {ECO:0000313|EMBL:KJL35555.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
putative MFS transporter
S5_scaffold_386_curated_11
Agreia bicolorata, Agreia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(11039..12154)
-----------------
DNA (1116bp)
protein (372aa)
Alanine dehydrogenase {ECO:0000256|PIRNR:PIRNR000183}; EC=1.4.1.1 {ECO:0000256|PIRNR:PIRNR000183};; TaxID=110935 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Agreia.;" source="Agreia bicolorata.;"
aldA; L-alanine dehydrogenase (EC:1.4.1.1) rbh
alanine dehydrogenase n=1 Tax=Microbacterium RepID=UPI0003769AFA rbh
S5_scaffold_386_curated_12
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12265..13380)
-----------------
DNA (1116bp)
protein (372aa)
Adenosine deaminase 1 {ECO:0000313|EMBL:CDJ98867.1}; EC=3.5.4.4 {ECO:0000313|EMBL:CDJ98867.1};; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
adenosine deaminase n=1 Tax=Microbacterium sp. 292MF RepID=UPI00037FAA82 rbh
add; adenosine deaminase rbh
S5_scaffold_386_curated_13
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13412..14746)
-----------------
DNA (1335bp)
protein (445aa)
Thymidine phosphorylase {ECO:0000313|EMBL:CDJ98868.1}; EC=2.4.2.4 {ECO:0000313|EMBL:CDJ98868.1};; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
Thymidine phosphorylase n=1 Tax=Microbacterium sp. TS-1 RepID=U2XCG8_9MICO rbh
deoA; thymidine phosphorylase rbh
S5_scaffold_386_curated_14
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14743..15144)
-----------------
DNA (402bp)
protein (134aa)
Cytidine deaminase {ECO:0000313|EMBL:CDJ98869.1}; EC=3.5.4.5 {ECO:0000313|EMBL:CDJ98869.1};; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
Cytidine deaminase n=1 Tax=Microbacterium sp. TS-1 RepID=U2XS37_9MICO
cytidine deaminase
S5_scaffold_386_curated_15
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15150..16433)
-----------------
DNA (1284bp)
protein (428aa)
Uncharacterized protein {ECO:0000313|EMBL:CDJ98870.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
transport protein; K02057 simple sugar transport system permease protein id=7719821 bin=CNBR_ACT species=Clavibacter michiganensis genus=Clavibacter taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria rbh
transport protein rbh
S5_scaffold_386_curated_16
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16430..17695)
-----------------
DNA (1266bp)
protein (422aa)
ABC transporter permease n=1 Tax=Microbacterium sp. B19 RepID=UPI0003486CEE rbh
Inner-membrane translocator {ECO:0000313|EMBL:CDJ98871.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
ABC transporter permease rbh
S5_scaffold_386_curated_17
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17692..19188)
-----------------
DNA (1497bp)
protein (499aa)
ABC transporter n=1 Tax=Agromyces italicus RepID=UPI0003B64955 rbh
Putative sugar transport protein (ABC superfamily atp_bind) {ECO:0000313|EMBL:CDJ98872.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
ABC transporter ATPase rbh
S5_scaffold_386_curated_18
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19291..20358)
-----------------
DNA (1068bp)
protein (356aa)
Uncharacterized protein n=1 Tax=Candidatus Aquiluna sp. IMCC13023 RepID=I0R2F8_9MICO rbh
Uncharacterized protein {ECO:0000313|EMBL:CDJ98873.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
basic membrane lipoprotein
S5_scaffold_386_curated_19
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20544..21548)
-----------------
DNA (1005bp)
protein (335aa)
nucleoside hydrolase n=1 Tax=Nocardiopsis halophila RepID=UPI00034D3C67 rbh
Inosine/uridine-preferring nucleoside hydrolase {ECO:0000313|EMBL:CDJ98874.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
inosine/uridine-preferring nucleoside hydrolase rbh
S5_scaffold_386_curated_20
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21545..22690)
-----------------
DNA (1146bp)
protein (382aa)
mannose-1-phosphate guanylyltransferase n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003719CA1 rbh
Mannose-1-phosphate guanylyltransferase {ECO:0000313|EMBL:CDJ98875.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
manC; mannose-1-phosphate guanylyltransferase rbh
S5_scaffold_386_curated_21
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22836..23264
-----------------
DNA (429bp)
protein (143aa)
Succinate dehydrogenase/fumarate reductase, cytochrome b subunit n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NCE0_MICTS
Succinate dehydrogenase/fumarate reductase,cytochrome b subunit {ECO:0000313|EMBL:CDJ98876.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
succinate dehydrogenase/fumarate reductase, cytochrome b subunit
S5_scaffold_386_curated_22
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23264..23719
-----------------
DNA (456bp)
protein (152aa)
Succinate dehydrogenase, hydrophobic anchorsubunit n=1 Tax=Microbacterium sp. TS-1 RepID=U2YRL1_9MICO
Succinate dehydrogenase, hydrophobic anchor subunit {ECO:0000313|EMBL:CDJ98877.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
sdhD; succinate dehydrogenase, hydrophobic anchor subunit
S5_scaffold_386_curated_23
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23762..25567
-----------------
DNA (1806bp)
protein (602aa)
Succinate dehydrogenase flavoprotein subunit {ECO:0000256|RuleBase:RU362051}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU362051};; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit n=1 Tax=Microbacterium sp. TS-1 RepID=U2XRP1_9MICO rbh
sdhA; succinate dehydrogenase/fumarate reductase, flavoprotein subunit rbh
S5_scaffold_386_curated_24
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25567..26346
-----------------
DNA (780bp)
protein (260aa)
Succinate dehydrogenase iron-sulfur subunit {ECO:0000256|RuleBase:RU361237}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU361237};; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
succinate dehydrogenase n=1 Tax=Microbacterium sp. B19 RepID=UPI0003483EDE rbh
sdhB; succinate dehydrogenase/fumarate reductase, Fe-S protein subunit rbh
S5_scaffold_386_curated_25
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26401..27630
-----------------
DNA (1230bp)
protein (410aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI000362130C rbh
Ribonuclease BN {ECO:0000313|EMBL:CDJ98881.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
hypothetical protein rbh
S5_scaffold_386_curated_26
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27680..28558
-----------------
DNA (879bp)
protein (293aa)
exodeoxyribonuclease III n=1 Tax=Microbacterium sp. 292MF RepID=UPI00035D9185 rbh
Exodeoxyribonuclease III Xth {ECO:0000313|EMBL:CDJ98882.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
exonuclease III rbh
S5_scaffold_386_curated_27
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28600..29604
-----------------
DNA (1005bp)
protein (335aa)
Tryptophan--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965}; EC=6.1.1.2 {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965};; Tryptophanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00140}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
Tryptophan--tRNA ligase n=2 Tax=Microbacterium RepID=H8E1D0_9MICO rbh
trpS; tryptophanyl-tRNA synthetase rbh
S5_scaffold_386_curated_28
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29745..30584)
-----------------
DNA (840bp)
protein (280aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI000376B91E rbh
Uncharacterized protein {ECO:0000313|EMBL:CDJ98884.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
hypothetical protein
S5_scaffold_386_curated_29
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30846..31406
-----------------
DNA (561bp)
protein (187aa)
Putative cetyltransferase n=1 Tax=Microbacterium sp. TS-1 RepID=U2XS50_9MICO
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:CDJ98885.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
putative acetyltransferase
S5_scaffold_386_curated_30
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31460..32335
-----------------
DNA (876bp)
protein (292aa)
DNA lyase n=1 Tax=Microbacterium sp. 292MF RepID=UPI00036CF68C rbh
DNA lyase {ECO:0000313|EMBL:KHK99511.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
mutM2; formamidopyrimidine-DNA glycosylase rbh
Displaying items 1-30 of 74 in total

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