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S5_scaffold_473_curated_9

Organism: S5_Microbacterium_68_17_curated

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 9 / 38
Location: 7633..8133

Top 3 Functional Annotations

Value Algorithm Source
rpoD; RNA polymerase, sigma-24 subunit, ECF subfamily RpoE (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 55.8
  • Coverage: 154.0
  • Bit_score: 170
  • Evalue 3.30e-40
RNA polymerase, sigma-24 subunit, ECF subfamily RpoE n=1 Tax=Propionibacterium freudenreichii subsp. shermanii (strain ATCC 9614 / CIP 103027 / CIRM-BIA1) RepID=D7GHZ8_PROFC similarity UNIREF
DB: UNIREF100
  • Identity: 55.8
  • Coverage: 154.0
  • Bit_score: 170
  • Evalue 1.20e-39
RNA polymerase sigma factor SigL {ECO:0000313|EMBL:KJQ52972.1}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.1
  • Coverage: 153.0
  • Bit_score: 182
  • Evalue 3.20e-43

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Taxonomy

Microbacterium sp. SA39 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 501
ATGACCGATGTGATCGCCGCCAACTCGATCGATCTGCTGCACTACTTCGAACGTCGTGTCGATGTGCGTGACGACGCGGCGGACCTGCTCGCCGAGACGATGATGACCGGATGGCGGAGGGTTCGCGACCTTCCGCCCGATGACGAGGGCGCCCGCATGTGGTTGTTCACGATCGCGCGGAATGTCCTCGGCAACGCCGATCGCACCGAGCGGCGACGGTGGCGGCTCGCGAACAGGCTGCGGGTGATGCTCGAACCCGCGGATGCTCCGGGTGCCGACGCCGGATCGGAGGTCCGGGACGCGGTCGCCCGCCTCGACCCCGACCTCGGCGAACTCATCCGGCTCGTTCACTGGGACGGCTTCACCGTCGCACAGGCTGCACTCATCCTGGGTATCCCGGCCTCCACGGCCCGAACACGCCATCAGCGCGCCAAAGAGGAGTTGCGGGGGGTGCTGCACGGCTCGGACCAGGTCGCGCACGAGGCTGTCGGCTACACGTAG
PROTEIN sequence
Length: 167
MTDVIAANSIDLLHYFERRVDVRDDAADLLAETMMTGWRRVRDLPPDDEGARMWLFTIARNVLGNADRTERRRWRLANRLRVMLEPADAPGADAGSEVRDAVARLDPDLGELIRLVHWDGFTVAQAALILGIPASTARTRHQRAKEELRGVLHGSDQVAHEAVGYT*