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S5_scaffold_473_curated

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Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S5_scaffold_473_curated_1
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2..1834)
DNA (1833bp) protein (611aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003818A1D rbh
Uncharacterized protein {ECO:0000313|EMBL:GAD35530.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
hypothetical protein rbh
S5_scaffold_473_curated_2
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2068..2910
DNA (843bp) protein (281aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KXK0_9MICO rbh
Uncharacterized protein {ECO:0000313|EMBL:CDJ99880.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
hypothetical protein rbh
S5_scaffold_473_curated_3
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3080..3832
DNA (753bp) protein (251aa)
tRNA (guanine-N(7)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; EC=2.1.1.33 {ECO:0000256|HAMAP-Rule:MF_01057};; tRNA (guanine(46)-N(7))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; tRNA(m7G46)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
tRNA (guanine-N(7)-)-methyltransferase n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KZP9_9MICO rbh
S-adenosylmethionine-dependent methyltransferase rbh
S5_scaffold_473_curated_4
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3876..4808
DNA (933bp) protein (311aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0003773A75 rbh
Predicted metal-dependent membrane protease {ECO:0000313|EMBL:CDJ99882.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
metal-dependent membrane protease rbh
S5_scaffold_473_curated_5
Cellulomonas bogoriensis, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4848..5486)
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Arthrobacter sp. (strain FB24) RepID=A0K219_ARTS2
Uncharacterized protein {ECO:0000313|EMBL:KGM14205.1}; TaxID=1386082 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas bogoriensis 69B4 = DSM 16987.;"
hypothetical protein
S5_scaffold_473_curated_6
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5667..6197
DNA (531bp) protein (177aa)
DNA-directed RNA polymerase specialized sigma subunit n=1 Tax=Microbacterium sp. TS-1 RepID=U2YYA6_9MICO
DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog {ECO:0000313|EMBL:CDJ99883.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog
S5_scaffold_473_curated_7
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6199..6816
DNA (618bp) protein (206aa)
Uncharacterized protein {ECO:0000313|EMBL:CDJ99884.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
S5_scaffold_473_curated_8
Propionibacterium freudenreichii, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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6935..7609
DNA (675bp) protein (225aa)
Hypothetical membrane anchored protein n=1 Tax=Propionibacterium freudenreichii subsp. shermanii (strain ATCC 9614 / CIP 103027 / CIRM-BIA1) RepID=D7GHZ7_PROFC
hypothetical protein
Hypothetical membrane anchored protein {ECO:0000313|EMBL:CBL55719.1}; TaxID=754252 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium freudenreichii subsp. shermanii (strain ATCC 9614 /; CIP 103027 / CIRM-BIA1).;"
S5_scaffold_473_curated_9
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7633..8133
DNA (501bp) protein (167aa)
rpoD; RNA polymerase, sigma-24 subunit, ECF subfamily RpoE (EC:2.7.7.6)
RNA polymerase, sigma-24 subunit, ECF subfamily RpoE n=1 Tax=Propionibacterium freudenreichii subsp. shermanii (strain ATCC 9614 / CIP 103027 / CIRM-BIA1) RepID=D7GHZ8_PROFC
RNA polymerase sigma factor SigL {ECO:0000313|EMBL:KJQ52972.1}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
S5_scaffold_473_curated_trna_1
unknown

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comp(8184..8256)
DNA (73bp)
transferRNA Arg
S5_scaffold_473_curated_10
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8323..9150)
DNA (828bp) protein (276aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. TS-1 RepID=U2YYF4_9MICO rbh
Putative Lipolytic protein G-D-S-L family {ECO:0000313|EMBL:CDJ99051.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
S5_scaffold_473_curated_11
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9266..10117
DNA (852bp) protein (284aa)
transglutaminase n=1 Tax=Microbacterium yannicii RepID=UPI00030C5C2C rbh
Putative Transglutaminase-like enzyme, cysteine protease {ECO:0000313|EMBL:CDJ99050.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
transglutaminase-like enzyme, cysteine protease rbh
S5_scaffold_473_curated_12
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


10314..11981
DNA (1668bp) protein (556aa)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
arginyl-tRNA synthetase n=1 Tax=Microbacterium sp. 292MF RepID=UPI000369D921 rbh
argS; arginyl-tRNA synthetase rbh
S5_scaffold_473_curated_13
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11984..12808
DNA (825bp) protein (275aa)
Uncharacterized protein n=2 Tax=Microbacterium RepID=H8E201_9MICO
Uncharacterized protein {ECO:0000313|EMBL:CDJ99048.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
hypothetical protein
S5_scaffold_473_curated_14
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12870..14384
DNA (1515bp) protein (505aa)
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120};; EC=4.1.1.20 {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738};; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
Diaminopimelate decarboxylase n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AEC9_9MICO rbh
lysA; diaminopimelate decarboxylase rbh
S5_scaffold_473_curated_15
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14381..15718
DNA (1338bp) protein (446aa)
Homoserine dehydrogenase {ECO:0000256|RuleBase:RU000579}; EC=1.1.1.3 {ECO:0000256|RuleBase:RU000579};; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
homoserine dehydrogenase n=1 Tax=Microbacterium sp. 292MF RepID=UPI00037A342D rbh
homoserine dehydrogenase rbh
S5_scaffold_473_curated_16
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15720..16805
DNA (1086bp) protein (362aa)
Threonine synthase {ECO:0000256|PIRNR:PIRNR038945}; EC=4.2.3.1 {ECO:0000256|PIRNR:PIRNR038945};; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
threonine synthase n=1 Tax=Microbacterium yannicii RepID=UPI000310550D rbh
thrC; threonine synthase rbh
S5_scaffold_473_curated_17
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16819..17811
DNA (993bp) protein (331aa)
Homoserine kinase {ECO:0000256|HAMAP-Rule:MF_00384, ECO:0000256|SAAS:SAAS00080104}; Short=HK {ECO:0000256|HAMAP-Rule:MF_00384};; Short=HSK {ECO:0000256|HAMAP-Rule:MF_00384};; EC=2.7.1.39 {ECO:0000256|HAMAP-Rule:MF_00384, ECO:0000256|SAAS:SAAS00129832};; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
homoserine kinase n=1 Tax=Microbacterium yannicii RepID=UPI000365E4D9 rbh
thrB; homoserine kinase rbh
S5_scaffold_473_curated_18
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17946..20192
DNA (2247bp) protein (749aa)
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
hypothetical protein n=1 Tax=Microbacterium sp. 11MF RepID=UPI00036A9EE8 rbh
rho; transcription termination factor rbh
S5_scaffold_473_curated_19
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20204..21292
DNA (1089bp) protein (363aa)
Peptide chain release factor 1 n=1 Tax=Microbacterium sp. TS-1 RepID=U2XR44_9MICO rbh
Peptide chain release factor 1 {ECO:0000313|EMBL:CDJ99041.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
prfA; protein chain release factor A rbh
S5_scaffold_473_curated_20
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21471..21878
DNA (408bp) protein (136aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI000301E98A
Uncharacterized protein {ECO:0000313|EMBL:CDJ99039.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
membrane protein
S5_scaffold_473_curated_21
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21900..23495)
DNA (1596bp) protein (532aa)
Uncharacterized protein n=2 Tax=Microbacterium testaceum RepID=E8N9D1_MICTS rbh
Uncharacterized protein {ECO:0000313|EMBL:CDJ99038.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
hypothetical protein rbh
S5_scaffold_473_curated_22
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23477..24220)
DNA (744bp) protein (248aa)
ABC-type multidrug transport system, ATPase component n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8N9D2_MICTS rbh
ABC-type multidrug transport system, ATPase component {ECO:0000313|EMBL:CDJ99037.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
multidrug ABC transporter ATPase rbh
S5_scaffold_473_curated_23
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24373..24951)
DNA (579bp) protein (193aa)
Serine acetyltransferase {ECO:0000256|PIRNR:PIRNR000441}; EC=2.3.1.30 {ECO:0000256|PIRNR:PIRNR000441};; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
serine O-acetyltransferase n=1 Tax=Microbacterium sp. B19 RepID=UPI0003459339 rbh
serine acetyltransferase rbh
S5_scaffold_473_curated_24
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24953..25891)
DNA (939bp) protein (313aa)
Cysteine synthase A, O-acetylserine sulfhydrolase A subunit {ECO:0000313|EMBL:CDJ99035.1}; EC=2.5.1.47 {ECO:0000313|EMBL:CDJ99035.1};; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
Cysteine synthase n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NAW4_MICTS rbh
cysteine synthase rbh
S5_scaffold_473_curated_25
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26061..26951
DNA (891bp) protein (297aa)
Release factor glutamine methyltransferase {ECO:0000256|HAMAP-Rule:MF_02126}; Short=RF MTase {ECO:0000256|HAMAP-Rule:MF_02126};; EC=2.1.1.297 {ECO:0000256|HAMAP-Rule:MF_02126};; N5-glutamine methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-(glutamine-N5) MTase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-glutamine N-methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
Release factor glutamine methyltransferase n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NAW3_MICTS rbh
hemK; methylase of polypeptide chain release factors rbh
S5_scaffold_473_curated_26
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27020..27709
DNA (690bp) protein (230aa)
Threonylcarbamoyl-AMP synthase {ECO:0000313|EMBL:KJL38601.1}; EC=2.7.7.87 {ECO:0000313|EMBL:KJL38601.1};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI00031C3C77 rbh
translation factor (SUA5)
S5_scaffold_473_curated_27
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27706..28881
DNA (1176bp) protein (392aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00036CC12E rbh
UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase {ECO:0000313|EMBL:CDJ99421.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase rbh
S5_scaffold_473_curated_28
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28878..29399
DNA (522bp) protein (174aa)
Uncharacterized protein n=2 Tax=Microbacterium RepID=H8E214_9MICO
Uncharacterized protein {ECO:0000313|EMBL:CDJ99422.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
hypothetical protein
S5_scaffold_473_curated_29
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29621..30430
DNA (810bp) protein (270aa)
ATP synthase subunit a n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NAV9_MICTS rbh
ATP synthase subunit a {ECO:0000256|HAMAP-Rule:MF_01393, ECO:0000256|RuleBase:RU000483}; ATP synthase F0 sector subunit a {ECO:0000256|HAMAP-Rule:MF_01393}; F-ATPase subunit 6 {ECO:0000256|HAMAP-Rule:MF_01393}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
atpB; F0F1-type ATP synthase, subunit a rbh
Displaying items 1-30 of 34 in total

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