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S5_scaffold_907_curated

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S5_scaffold_907_curated_1
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..187
DNA (186bp) protein (62aa)
Aconitate hydratase {ECO:0000256|RuleBase:RU361275}; Short=Aconitase {ECO:0000256|RuleBase:RU361275};; EC=4.2.1.3 {ECO:0000256|RuleBase:RU361275};; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
aconitate hydratase n=1 Tax=Bradyrhizobium japonicum RepID=UPI00036C1BE1
aconitate hydratase domain-containing protein
S5_scaffold_907_curated_2
Sphingobium chlorophenolicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(819..2123)
DNA (1305bp) protein (435aa)
(R)-benzylsuccinyl-CoA dehydrogenase (EC:1.3.99.21) rbh
(R)-benzylsuccinyl-CoA dehydrogenase {ECO:0000313|EMBL:AEG50961.1}; EC=1.3.8.3 {ECO:0000313|EMBL:AEG50961.1};; TaxID=690566 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium chlorophenolicum L-1.;"
acyl-CoA dehydrogenase n=1 Tax=Bradyrhizobium elkanii RepID=UPI00036F4D3A rbh
S5_scaffold_907_curated_3
Acidiphilium sp. PM, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2135..3814)
DNA (1680bp) protein (560aa)
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:EGO95419.1}; EC=6.2.1.3 {ECO:0000313|EMBL:EGO95419.1};; TaxID=1043206 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. PM.;"
hypothetical protein n=1 Tax=Mesorhizobium sp. WSM4349 RepID=UPI0003655BC2 rbh
AMP-dependent synthetase and ligase rbh
S5_scaffold_907_curated_4
Tistrella mobilis, Tistrella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3811..4686)
DNA (876bp) protein (292aa)
hypothetical protein n=1 Tax=Mesorhizobium sp. WSM4349 RepID=UPI00035EBDD1 rbh
3-hydroxybutyryl-CoA dehydrogenase rbh
3-hydroxybutyryl-CoA dehydrogenase {ECO:0000313|EMBL:AFK52467.1}; TaxID=1110502 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Tistrella.;" source="Tistrella mobilis (strain KA081020-065).;"
S5_scaffold_907_curated_5
bacterium YEK0313, Bacteria

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comp(4679..5470)
DNA (792bp) protein (264aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI0002D3F319 rbh
HTH-type transcriptional regulator McbR {ECO:0000313|EMBL:CEJ11094.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
GntR family transcriptional regulator
S5_scaffold_907_curated_6
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5486..7018)
DNA (1533bp) protein (511aa)
ABC transporter ATP-binding protein n=1 Tax=Mesorhizobium sp. WSM4349 RepID=UPI00036D2A52 rbh
ABC transporter-like protein rbh
ABC transporter related protein {ECO:0000313|EMBL:ADU44862.1}; TaxID=652103 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain DX-1).;"
S5_scaffold_907_curated_7
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7024..8142)
DNA (1119bp) protein (373aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI00036EAA5A rbh
Uncharacterized protein {ECO:0000313|EMBL:GAN76766.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
hypothetical protein
S5_scaffold_907_curated_8
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8146..10257)
DNA (2112bp) protein (704aa)
hypothetical protein n=1 Tax=Mesorhizobium sp. WSM4349 RepID=UPI0003822241 rbh
Inner-membrane translocator {ECO:0000313|EMBL:ADU44863.1}; TaxID=652103 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain DX-1).;"
inner-membrane translocator rbh
S5_scaffold_907_curated_9
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10373..11395)
DNA (1023bp) protein (341aa)
hypothetical protein n=1 Tax=Mesorhizobium sp. WSM4349 RepID=UPI00037BEDE6 rbh
ABC transporter substrate-binding protein rbh
ABC transporter substrate-binding protein {ECO:0000313|EMBL:ADU44864.1}; TaxID=652103 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain DX-1).;"
S5_scaffold_907_curated_10
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11452..12438)
DNA (987bp) protein (329aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI0002D90AAB rbh
inner-membrane translocator rbh
Inner-membrane translocator {ECO:0000313|EMBL:ADU44865.1}; TaxID=652103 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain DX-1).;"
S5_scaffold_907_curated_11
Bradyrhizobium sp. DOA9, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(12861..13028)
DNA (168bp) protein (56aa)
transposase n=1 Tax=Bradyrhizobium japonicum RepID=UPI0003769136
Transposase for insertion sequence element IS1081 {ECO:0000313|EMBL:GAJ38055.1}; TaxID=1126627 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DOA9.;"
transposase, mutator type
S5_scaffold_907_curated_12
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(13386..14141)
DNA (756bp) protein (252aa)
amidase n=1 Tax=Bradyrhizobium japonicum RepID=UPI000366F550 rbh
Amidase {ECO:0000313|EMBL:KGT80139.1}; TaxID=375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum.;"
amidase
Displaying 12 items

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