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S5_scaffold_3029_curated

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S5_scaffold_3029_curated_1
Lutibaculum baratangense, Lutibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..979)
DNA (978bp) protein (326aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000371FD36 rbh
Glycine/D-amino acid oxidase {ECO:0000313|EMBL:ESR23684.1}; TaxID=631454 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Lutibaculum.;" source="Lutibaculum baratangense AMV1.;"
FAD dependent oxidoreductase rbh
S5_scaffold_3029_curated_2
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1127..1600)
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y082_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP38159.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
S5_scaffold_3029_curated_3
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1605..1811)
DNA (207bp) protein (69aa)
Uncharacterized protein UPF0150 n=1 Tax=Rhodovulum sp. PH10 RepID=J6UHY1_9RHOB
Uncharacterized protein UPF0150 {ECO:0000313|EMBL:EJW13656.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
hypothetical protein
S5_scaffold_3029_curated_4
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2475..3500
DNA (1026bp) protein (342aa)
Putative uncharacterized protein n=1 Tax=Rhizobium etli CNPAF512 RepID=F2AEE9_RHIET
Uncharacterized protein {ECO:0000313|EMBL:EGE57167.1}; TaxID=993047 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli CNPAF512.;"
S5_scaffold_3029_curated_5
Xylanimonas cellulosilytica, Xylanimonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3374..4834)
DNA (1461bp) protein (487aa)
Amino acid permease-associated region n=1 Tax=Xylanimonas cellulosilytica (strain DSM 15894 / CECT 5975 / LMG 20990 / XIL07) RepID=D1BRR7_XYLCX rbh
amino acid permease-associated region rbh
Amino acid permease-associated region {ECO:0000313|EMBL:ACZ32333.1}; TaxID=446471 species="Bacteria; Actinobacteria; Micrococcales; Promicromonosporaceae; Xylanimonas.;" source="Xylanimonas cellulosilytica (strain DSM 15894 / CECT 5975 / LMG 20990; / XIL07).;"
S5_scaffold_3029_curated_6
Beijerinckia indica, Beijerinckia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4948..5499)
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) RepID=B2II85_BEII9
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACB94668.1}; TaxID=395963 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Beijerinckia.;" source="Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB; 8712).;"
S5_scaffold_3029_curated_7
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5661..7061)
DNA (1401bp) protein (467aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003787B1A rbh
glutamine synthetase rbh
Glutamine synthetase family protein {ECO:0000313|EMBL:BAF90440.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
S5_scaffold_3029_curated_8
Lutibaculum baratangense, Lutibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7320..8414
DNA (1095bp) protein (365aa)
putrescine/spermidine ABC transporter substrate-binding protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000306371C rbh
Putrescine-binding periplasmic protein {ECO:0000256|PIRNR:PIRNR019574}; TaxID=631454 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Lutibaculum.;" source="Lutibaculum baratangense AMV1.;"
family 1 extracellular solute-binding protein rbh
S5_scaffold_3029_curated_9
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8478..9629
DNA (1152bp) protein (384aa)
Polyamine-transporting ATPase {ECO:0000256|SAAS:SAAS00083160}; EC=3.6.3.31 {ECO:0000256|SAAS:SAAS00083160};; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003754D7D rbh
potG; Putrescine ABC transporter permease/ATPase rbh
S5_scaffold_3029_curated_10
Mesorhizobium sp. L103C131B0, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10022..10795
DNA (774bp) protein (258aa)
UPI0003D02F2F related cluster n=1 Tax=unknown RepID=UPI0003D02F2F rbh
Type II restriction endonuclease DpnI {ECO:0000313|EMBL:ESZ59867.1}; TaxID=1287089 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L103C131B0.;"
restriction endonuclease family protein rbh
S5_scaffold_3029_curated_11
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10811..11092
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IE90_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:KJC43679.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
hypothetical protein
Displaying 11 items

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