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S5_scaffold_1051_curated

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S5_scaffold_1051_curated_1
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..665)
DNA (663bp) protein (221aa)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897};; 1-deoxyxylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Kaistia granuli RepID=UPI00037F3259 rbh
1-deoxy-D-xylulose-5-phosphate synthase rbh
S5_scaffold_1051_curated_2
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(903..2576)
DNA (1674bp) protein (558aa)
Beta-N-acetylhexosaminidase {ECO:0000256|SAAS:SAAS00114579}; EC=3.2.1.52 {ECO:0000256|SAAS:SAAS00114579};; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
Beta-hexosaminidase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R7D8_PELHB rbh
beta-hexosaminidase rbh
S5_scaffold_1051_curated_3
Ruegeria pomeroyi, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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2740..3975
DNA (1236bp) protein (412aa)
OmpA family protein n=1 Tax=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) RepID=Q5LTF2_RUEPO rbh
OmpA family protein rbh
OmpA family protein {ECO:0000313|EMBL:AAV94749.1}; TaxID=246200 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3); (Silicibacter pomeroyi).;"
S5_scaffold_1051_curated_4
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4000..4917)
DNA (918bp) protein (306aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00037D1A5A rbh
pirin rbh
Pirin-like protein {ECO:0000313|EMBL:ADZ71302.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
S5_scaffold_1051_curated_5
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4996..5244)
DNA (249bp) protein (83aa)
Exodeoxyribonuclease 7 small subunit {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198685}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198686};; Exodeoxyribonuclease VII small subunit {ECO:0000256|HAMAP-Rule:MF_00337}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
xseB; exodeoxyribonuclease VII small subunit (EC:3.1.11.6)
Exodeoxyribonuclease 7 small subunit n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TSY8_9BRAD
S5_scaffold_1051_curated_6
Mesorhizobium australicum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5265..6191)
DNA (927bp) protein (309aa)
Deacetylase, histone deacetylase/acetoin utilization protein n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KRX3_MESAW rbh
deacetylase, histone deacetylase/acetoin utilization protein rbh
Deacetylase, histone deacetylase/acetoin utilization protein {ECO:0000313|EMBL:AGB47435.1}; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073).;"
S5_scaffold_1051_curated_7
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6214..7119)
DNA (906bp) protein (302aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036E4F2E
Enoyl-CoA hydratase/isomerase
Enoyl-CoA hydratase/isomerase family protein {ECO:0000313|EMBL:ADZ71714.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
S5_scaffold_1051_curated_8
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

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7750..8220
DNA (471bp) protein (157aa)
Threonylcarbamoyl-AMP synthase {ECO:0000256|PIRNR:PIRNR004930}; Short=TC-AMP synthase {ECO:0000256|PIRNR:PIRNR004930};; EC=2.7.7.87 {ECO:0000256|PIRNR:PIRNR004930};; L-threonylcarbamoyladenylate synthase {ECO:0000256|PIRNR:PIRNR004930}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
Probable translation factor sua5 protein n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2IYA4_POLGS
translation factor sua5 protein
S5_scaffold_1051_curated_9
unknown

Not on your lists

comp(8217..8318)
DNA (102bp) protein (34aa)

This feature has no annotations

S5_scaffold_1051_curated_10
unknown

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comp(8356..9093)
DNA (738bp) protein (246aa)

This feature has no annotations

S5_scaffold_1051_curated_11
Granulicella tundricola, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(9124..9648)
DNA (525bp) protein (175aa)
Phage-associated protein-like protein n=1 Tax=Acidobacterium sp. (strain MP5ACTX9) RepID=E8X4Z5_ACISM
hypothetical protein
Phage-associated protein-like protein {ECO:0000313|EMBL:ADW67187.1}; TaxID=1198114 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella tundricola (strain ATCC BAA-1859 / DSM 23138 / MP5ACTX9).;"
S5_scaffold_1051_curated_12
Bradyrhizobium sp. YR681, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9703..10662)
DNA (960bp) protein (320aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036B3EE6 rbh
DnaJ-class molecular chaperone with C-terminal Zn finger domain containing protein {ECO:0000313|EMBL:EJN09900.1}; Flags: Precursor;; TaxID=1144344 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. YR681.;"
chaperone DnaJ domain-containing protein rbh
S5_scaffold_1051_curated_13

Not on your lists

comp(10762..11241)
DNA (480bp) protein (160aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003760134
Uncharacterized protein {ECO:0000313|EMBL:KKN86419.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
S5_scaffold_1051_curated_14
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11296..11892
DNA (597bp) protein (199aa)
Pyridoxine/pyridoxamine 5'-phosphate oxidase {ECO:0000256|HAMAP-Rule:MF_01629}; EC=1.4.3.5 {ECO:0000256|HAMAP-Rule:MF_01629};; PNP/PMP oxidase {ECO:0000256|HAMAP-Rule:MF_01629}; Pyridoxal 5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_01629}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
Pyridoxine/pyridoxamine 5'-phosphate oxidase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YQ81_9RHIZ
pyridoxamine 5'-phosphate oxidase
S5_scaffold_1051_curated_15
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11889..12596)
DNA (708bp) protein (236aa)
Potassium efflux system protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HW48_9RHIZ
Potassium efflux system protein {ECO:0000313|EMBL:EHK55052.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
kefB; Kef-type K+ transport
Displaying 15 items

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