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S5_scaffold_3893_curated

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S5_scaffold_3893_curated_1
Lutibaculum baratangense, Lutibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..131)
DNA (129bp) protein (43aa)
Succinate dehydrogenase iron-sulfur subunit {ECO:0000256|RuleBase:RU361237}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU361237};; TaxID=631454 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Lutibaculum.;" source="Lutibaculum baratangense AMV1.;"
sdhB; succinate dehydrogenase, iron-sulfur subunit (EC:1.3.99.1)
Succinate dehydrogenase iron-sulfur protein n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4RKB3_9RHIZ
S5_scaffold_3893_curated_2
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(201..644)
DNA (444bp) protein (148aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036AF115
Uncharacterized protein {ECO:0000313|EMBL:CDX30545.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
hypothetical protein
S5_scaffold_3893_curated_3
unknown

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comp(1006..1311)
DNA (306bp) protein (102aa)

This feature has no annotations

S5_scaffold_3893_curated_4

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comp(1391..3169)
DNA (1779bp) protein (593aa)
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0002EF46B1 rbh
Uncharacterized protein {ECO:0000313|EMBL:AHN97621.1}; Flags: Fragment;; TaxID=1447233 species="Bacteria; environmental samples.;" source="uncultured bacterium 12AC_lac13.;"
hypothetical protein rbh
S5_scaffold_3893_curated_5

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comp(3627..4013)
DNA (387bp) protein (129aa)
succinate dehydrogenase n=1 Tax=Kaistia granuli RepID=UPI00035FDA84
Uncharacterized protein {ECO:0000313|EMBL:KKN89069.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
succinate dehydrogenase, flavoprotein subunit
S5_scaffold_3893_curated_6
Amphimedon queenslandica, Amphimedon, Haplosclerida, Demospongiae, Porifera, Metazoa

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4532..4918
DNA (387bp) protein (129aa)
Uncharacterized protein (Fragment) n=1 Tax=Amphimedon queenslandica RepID=I1E5D3_AMPQE
Uncharacterized protein {ECO:0000313|EnsemblMetazoa:PAC:15698686}; TaxID=400682 species="Eukaryota; Metazoa; Porifera; Demospongiae; Haplosclerida; Niphatidae; Amphimedon.;" source="Amphimedon queenslandica (Sponge).;"
hypothetical protein
S5_scaffold_3893_curated_7
unknown

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4911..5015
DNA (105bp) protein (35aa)

This feature has no annotations

S5_scaffold_3893_curated_8
Labrenzia aggregata, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5907..6464)
DNA (558bp) protein (186aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00037D2209
Succinate dehydrogenase cytochrome B-556 subunit {ECO:0000313|EMBL:EAV43635.1}; TaxID=384765 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenzia aggregata (strain ATCC 25650 / DSM 13394 / JCM 20685 / NBRC; 16684 / NCIMB 2208 / IAM 12614) (Stappia aggregata).;"
Succinate dehydrogenase, cytochrome b556 subunit
S5_scaffold_3893_curated_9
Bradyrhizobium sp. ORS 285, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6485..7204
DNA (720bp) protein (240aa)
3-isopropylmalate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445}; EC=1.1.1.85 {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445};; 3-IPM-DH {ECO:0000256|HAMAP-Rule:MF_01033}; Beta-IPM dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033}; TaxID=115808 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. ORS 285.;"
3-isopropylmalate dehydrogenase n=1 Tax=Bradyrhizobium sp. ORS 285 RepID=H0RYA6_9BRAD rbh
leuB; 3-isopropylmalate dehydrogenase rbh
Displaying 9 items

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