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S5_scaffold_1402_curated_5

Organism: S5_Rhizobiales_66_15_curated

near complete RP 46 / 55 MC: 5 BSCG 45 / 51 MC: 4 ASCG 9 / 38
Location: 4241..5896

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=56946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.6
  • Coverage: 551.0
  • Bit_score: 905
  • Evalue 2.40e-260
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 82.6
  • Coverage: 551.0
  • Bit_score: 904
  • Evalue 8.20e-261
  • rbh
DNA-directed RNA polymerase subunit beta n=1 Tax=Kaistia granuli RepID=UPI0003823013 similarity UNIREF
DB: UNIREF100
  • Identity: 85.3
  • Coverage: 539.0
  • Bit_score: 919
  • Evalue 1.10e-264
  • rbh

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Taxonomy

Afipia broomeae → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1656
TTGTCCGAGCGGATCGTGCGCGACGACGTGTTCACCTCGATCCACATCGAGGAGTTCGAGGTCAACGCGCGCGACACCAAGCTCGGACCGGAGGAGATCACTCGCGACATTCCGAACGTCTCGGAAGAGGCACTGAAGAGCCTCGACGAGGCGGGCATCGTCTATATCGGCGCCGAAGTCGTCGCCGGCGACATCCTGGTCGGCAAGATCACGCCGAAGGGCGAGAGCCCGATGACGCCGGAGGAGAAGCTGCTGCGCGCGATCTTCGGCGAGAAGGCGTCCGACGTTCGCGACACGTCGCTTCGCGTCCCGCCGGGCGTGCAGGGCACGGTCGTCGAGGTGCGCGTCTTCAACCGGCACGGCGTCGAGAAGGACGAGCGCGCCATGGCGATCGAGCGCGAGGAGATCGAGCGGCTCGCCAAGGACCGCGACGACGAGCAGGCGATCCTCGACCGCAACGTCTTCGGCCGTCTCACCGACATGCTGACCAACAAGGTGGCGGTGTCGGGCCCGAAGAGCTTCAAGAAGGGCGGCAAGATCACGGCCGACGTTCTGGAGGAGTACCCGAGGAGTCAATGGTGGCAGTTCGCGGTCTCCAACGAAAAGCTGATGGCCGAGATCGAAGCGCTCCGCGCTCAGTACGACGAAAGCCGCAAGGGGCTGGAGAAGCGGTTCATCGACAAGGTCGAGAAGCTGCAGCGCGGCGACGAGTTGCCGCCGGGCGTGATGAAGATGGTCAAGGTCTTCGTCGCGGTGAAGCGCAAGATCCAGCCGGGCGACAAGATGGCCGGCCGCCACGGCAACAAGGGCGTGGTGTCGAAGATCGTTCCGATCGAGGACATGCCGTATCTGGATGACGGCACTCAGGTCGACATCGTGCTCAATCCGCTCGGCGTGCCGAGCCGGATGAACGTCGGCCAGATTCTGGAGACGCATCTCGGCTGGGCGTGCGCCGGCCTCGGGCTGAAGATCGGCAAGCTGGTCGAGTCGTACAAGAAGAACGGCGACGTGAAGCCGCTCCGCAAGGTGCTGAAGGGCCTTTACGGCTCGAACAGCAAGAATGAGAAGGTCGCCGACTACGACGACGCATCGACGGTGCTGCTGGCCCAGCAGCTGACGGCGGGCGTGCCGATCGCGACGCCGGTCTTCGACGGCGCGCGCGAACCCGACGTGGTCGAGCTCCTGAAGGAGGCCGACCTCGATCCGTCCGGACAGTCGATGCTCTTCGACGGGCGCTCGGGCGAGCAGTTCGACCGGCCGGTGACCGTCGGCTACATCTACATGCTGAAGCTGCACCATCTCGTCGACGACAAGATCCACGCCCGCTCGATCGGCCCGTACTCGCTGGTCACCCAGCAGCCGCTCGGCGGCAAGGCGCAGTTCGGCGGCCAGCGCTTCGGCGAAATGGAAGTGTGGGCGCTGGAGGCCTACGGCGCGGCGTACACGCTCCAGGAAATGCTGACGGTGAAGTCTGACGACGTCGCCGGGCGGACCAAGGTCTACGAGGCGATCGTCCGCGGCGACGACACGCTCGAAGCCGGCATTCCGGAATCGTTCAACGTGCTGGTCAAGGAAATGCGGTCGCTCGGCCTCGATGTCGACCTCGACAACTCGAAGCTGCGCCCGACGCCGATTGCGTCGCGCGCGGCGGAATAG
PROTEIN sequence
Length: 552
LSERIVRDDVFTSIHIEEFEVNARDTKLGPEEITRDIPNVSEEALKSLDEAGIVYIGAEVVAGDILVGKITPKGESPMTPEEKLLRAIFGEKASDVRDTSLRVPPGVQGTVVEVRVFNRHGVEKDERAMAIEREEIERLAKDRDDEQAILDRNVFGRLTDMLTNKVAVSGPKSFKKGGKITADVLEEYPRSQWWQFAVSNEKLMAEIEALRAQYDESRKGLEKRFIDKVEKLQRGDELPPGVMKMVKVFVAVKRKIQPGDKMAGRHGNKGVVSKIVPIEDMPYLDDGTQVDIVLNPLGVPSRMNVGQILETHLGWACAGLGLKIGKLVESYKKNGDVKPLRKVLKGLYGSNSKNEKVADYDDASTVLLAQQLTAGVPIATPVFDGAREPDVVELLKEADLDPSGQSMLFDGRSGEQFDRPVTVGYIYMLKLHHLVDDKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVAGRTKVYEAIVRGDDTLEAGIPESFNVLVKEMRSLGLDVDLDNSKLRPTPIASRAAE*