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S5_scaffold_1402_curated

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S5_scaffold_1402_curated_1
Methyloceanibacter caenitepidi, Methyloceanibacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..433
DNA (432bp) protein (144aa)
50S ribosomal protein L1 n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002E3BA94
LSU ribosomal protein L1p
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=1384459 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methyloceanibacter.;" source="Methyloceanibacter caenitepidi.;"
S5_scaffold_1402_curated_2
Ochrobactrum sp. CDB2, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1282..1650
DNA (369bp) protein (123aa)
50S ribosomal protein L7 n=1 Tax=Kaistia granuli RepID=UPI0003715229
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=360313 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum sp. CDB2.;"
rplL; ribosomal protein L7/L12
S5_scaffold_1402_curated_3
Bradyrhizobium sp. SEMIA 6002, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1707..2318)
DNA (612bp) protein (204aa)
RNA polymerase beta subunit (Fragment) n=1 Tax=Bradyrhizobium sp. SEMIA 6002 RepID=F5B5B4_9BRAD
RNA polymerase beta subunit {ECO:0000313|EMBL:AEC49863.1}; Flags: Fragment;; TaxID=1005742 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. SEMIA 6002.;"
S5_scaffold_1402_curated_4
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2322..3788)
DNA (1467bp) protein (489aa)
Uncharacterized protein n=1 Tax=Xanthomonas hortorum pv. carotae str. M081 RepID=V7ZFZ2_9XANT
Tax=GWF1_Rhodobacteraceae_65_7_curated
S5_scaffold_1402_curated_5
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4241..5896
DNA (1656bp) protein (552aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=56946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae.;"
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6) rbh
DNA-directed RNA polymerase subunit beta n=1 Tax=Kaistia granuli RepID=UPI0003823013 rbh
S5_scaffold_1402_curated_6
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5936..8788)
DNA (2853bp) protein (951aa)
Uncharacterized protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UY44_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:CEG07608.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
hypothetical protein
S5_scaffold_1402_curated_7
Mastigocladus laminosus, Mastigocladus, Stigonematales, Cyanobacteria, Bacteria

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comp(8831..10099)
DNA (1269bp) protein (423aa)
Uncharacterized protein {ECO:0000313|EMBL:KIY15219.1}; Flags: Fragment;; TaxID=1594576 species="Bacteria; Cyanobacteria; Stigonematales; Mastigocladus.;" source="Mastigocladus laminosus UU774.;"
S5_scaffold_1402_curated_8
Bradyrhizobium sp. CCGE-LA001, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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10511..10807
DNA (297bp) protein (99aa)
hypothetical protein n=1 Tax=Bradyrhizobium japonicum RepID=UPI0003747D98
Uncharacterized protein {ECO:0000313|EMBL:EJZ29097.1}; TaxID=1223566 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. CCGE-LA001.;"
hypothetical protein
S5_scaffold_1402_curated_9
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(10859..12025)
DNA (1167bp) protein (389aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI0003649CDD rbh
Putative membrane protein {ECO:0000313|EMBL:KFC67928.1}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
major facilitator superfamily protein
S5_scaffold_1402_curated_10
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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12465..12836
DNA (372bp) protein (124aa)
30S ribosomal protein S12 n=1 Tax=Hoeflea sp. 108 RepID=UPI0003800E0C
30S ribosomal protein S12
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
S5_scaffold_1402_curated_11
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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12876..13346
DNA (471bp) protein (157aa)
30S ribosomal protein S7 n=1 Tax=Rhodovulum sp. PH10 RepID=J6UG33_9RHOB
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
30S ribosomal protein S7
S5_scaffold_1402_curated_12
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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13367..13564
DNA (198bp) protein (66aa)
Elongation factor G n=1 Tax=Caulobacter crescentus OR37 RepID=R0CUN8_CAUCE
translation elongation factor G (EF-G)
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=1292034 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus OR37.;"
Displaying 12 items

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