ggKbase | organisms

Consensus taxonomy: Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Metagenomic Context

Parent: FUEL_CELL_S5_Rhizobiales-rel_66_15 Manually curated genome
Original version: FUEL_CELL_S5_Rhizobiales-rel_66_15

Properties

Avg. coverage: 1.00 Longest contig: 26.10 Kbp Bin length: 2.53 Mbp GC content: 64.77 %

Contigs count: 756 Features count: 3158 rRNAs count: 0 tRNAs count: 25

Genome completeness

near complete RP 46 / 55 MC: 5 BSCG 45 / 51 MC: 4 ASCG 9 / 38

Displaying items 601-650 of 756 in total

contig	# features	sequence size	GC content (%)	Cov	Coding Density (%)
S5_scaffold_19304_curated Species: Rhizobium leguminosarum (50%)	2	1018 bp	57.56	1.00	78.68
S5_scaffold_14836_curated Species: Rhodopseudomonas palustris (100%)	2	1205 bp	64.56	1.00	97.84
S5_scaffold_11172_curated Species: Inquilinus limosus (50%)	2	1589 bp	67.28	1.00	93.64
S5_scaffold_15160_curated Species: Mesorhizobium alhagi (50%)	2	1201 bp	65.03	1.00	81.43
S5_scaffold_12176_curated Species: Lutibaculum baratangense (50%)	2	1354 bp	63.44	1.00	85.30
S5_scaffold_11647_curated Species: Pelagibacterium halotolerans (50%)	2	1494 bp	64.86	1.00	97.39
S5_scaffold_4213_curated Species: bacterium YEK0313 (50%)	2	3652 bp	66.57	1.00	68.26
S5_scaffold_14790_curated Species: Lutibaculum baratangense (50%)	2	1215 bp	65.02	1.00	82.96
S5_scaffold_4192_curated Species: Polymorphum gilvum (100%)	2	3800 bp	67.05	1.00	95.13
S5_scaffold_9971_curated Species: Polymorphum gilvum (50%)	2	1702 bp	65.98	1.00	100.12
S5_scaffold_8089_curated Species: Roseibium sp. TrichSKD4 (50%)	2	2743 bp	66.68	1.00	97.89
S5_scaffold_4326_curated Species: Inquilinus limosus (50%)	2	3475 bp	65.73	1.00	100.06
S5_scaffold_10252_curated Species: Mesorhizobium sp. STM 4661 (50%)	2	1715 bp	67.06	1.00	90.26
S5_scaffold_14426_curated Species: Bradyrhizobium diazoefficiens (50%)	2	1031 bp	68.87	1.00	74.20
S5_scaffold_9341_curated Species: Polymorphum gilvum (50%)	2	1847 bp	70.22	1.00	95.67
S5_scaffold_9386_curated Species: Rhizobium sp. CF142 (50%)	2	1850 bp	65.35	1.00	80.92
S5_scaffold_13315_curated Species: Nitratireductor indicus (50%)	2	1293 bp	66.82	1.00	90.95
S5_scaffold_5080_curated Species: Aurantimonas manganoxydans (50%)	2	3118 bp	65.91	1.00	94.48
S5_scaffold_18285_curated Species: Labrenzia aggregata (50%)	2	1083 bp	68.88	1.00	90.03
S5_scaffold_12581_curated Species: R_Alphaproteobacteria_66_14 (50%)	2	1270 bp	67.95	1.00	92.83
S5_scaffold_11071_curated Species: Microvirga lotononidis (50%)	2	1536 bp	65.89	1.00	100.20
S5_scaffold_11076_curated Species: Mesorhizobium loti (50%)	2	1555 bp	66.05	1.00	95.31
S5_scaffold_17408_curated Species: Rhodospirillaceae bacterium BRH_c57 (50%)	2	1001 bp	63.34	1.00	88.41
S5_scaffold_10557_curated Species: Polymorphum gilvum (50%)	2	1545 bp	68.48	1.00	99.22
S5_scaffold_12338_curated Species: Pseudovibrio sp. JE062 (50%)	2	1324 bp	60.88	1.00	83.38
S5_scaffold_9459_curated Species: Devosia sp. DDB001 (50%)	2	1821 bp	64.25	1.00	72.82
S5_scaffold_9691_curated Species: Azorhizobium caulinodans (50%)	2	1424 bp	63.13	1.00	85.32
S5_scaffold_12698_curated Species: Rhizobium freirei (50%)	2	1402 bp	67.55	1.00	95.86
S5_scaffold_10390_curated Species: Sinorhizobium fredii (50%)	2	1665 bp	68.41	1.00	100.18
S5_scaffold_5898_curated Species: Polymorphum gilvum (50%)	2	2700 bp	66.19	1.00	80.11
S5_scaffold_9561_curated Species: Mesorhizobium sp. STM 4661 (50%)	2	1752 bp	65.87	1.00	91.27
S5_scaffold_5911_curated Species: Hyphomicrobium denitrificans (50%)	2	2769 bp	58.90	1.00	46.48
S5_scaffold_9316_curated Species: Rhodovulum sp. PH10 (50%)	2	1757 bp	65.96	1.00	90.15
S5_scaffold_10307_curated Species: Azorhizobium caulinodans (50%)	2	1613 bp	64.85	1.00	80.53
S5_scaffold_7112_curated Species: alpha proteobacterium MA2 (50%)	2	2291 bp	65.17	1.00	70.58
S5_scaffold_7445_curated Species: Ochrobactrum intermedium (50%)	2	2095 bp	62.67	1.00	41.96
S5_scaffold_14201_curated Species: Burkholderia gladioli (50%)	2	1301 bp	66.26	1.00	73.56
S5_scaffold_13979_curated Species: Methylobacterium nodulans (50%)	2	1244 bp	70.74	1.00	93.81
S5_scaffold_7447_curated Species: Polymorphum gilvum (50%)	2	2183 bp	67.29	1.00	100.05
S5_scaffold_6147_curated Species: Sinorhizobium meliloti (50%)	2	2640 bp	66.14	1.00	92.73
S5_scaffold_11754_curated Species: Mesorhizobium sp. L48C026A00 (50%)	2	1446 bp	67.91	1.00	72.41
S5_scaffold_9011_curated Species: Azospirillum brasilense (50%)	2	1871 bp	74.67	1.00	91.40
S5_scaffold_10164_curated Species: Nitratireductor aquibiodomus (50%)	2	1648 bp	66.02	1.00	96.66
S5_scaffold_10163_curated Species: Lutibaculum baratangense (50%)	2	1692 bp	65.01	1.00	99.65
S5_scaffold_13423_curated Species: Beijerinckia indica (50%)	2	1286 bp	57.23	1.00	92.61
S5_scaffold_12260_curated	2	1345 bp	49.59	1.00	12.71
S5_scaffold_5327_curated Species: Chelativorans sp. BNC1 (50%)	2	2978 bp	66.92	1.00	93.79
S5_scaffold_13199_curated Species: Mesorhizobium sp. L2C067A000 (50%)	2	1350 bp	66.96	1.00	100.44
S5_scaffold_9149_curated Species: Hoeflea sp. BAL378 (50%)	2	1676 bp	65.45	1.00	95.76
S5_scaffold_11445_curated Species: Lutibaculum baratangense (50%)	2	1407 bp	67.09	1.00	101.28

Displaying items 601-650 of 756 in total

S5_Rhizobiales_66_15_curated

FUEL_CELL_S5_Rhizobiales_65_1

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

S5_Rhizobiales_66_15_curated

FUEL_CELL_S5_Rhizobiales_65_1

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

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