ggKbase | organisms

Consensus taxonomy: Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Metagenomic Context

Parent: FUEL_CELL_S5_Rhizobiales-rel_66_15 Manually curated genome
Original version: FUEL_CELL_S5_Rhizobiales-rel_66_15

Properties

Avg. coverage: 1.00 Longest contig: 26.10 Kbp Bin length: 2.53 Mbp GC content: 64.77 %

Contigs count: 756 Features count: 3158 rRNAs count: 0 tRNAs count: 25

Genome completeness

near complete RP 46 / 55 MC: 5 BSCG 45 / 51 MC: 4 ASCG 9 / 38

Displaying items 651-700 of 756 in total

contig	# features	sequence size	GC content (%)	Cov	Coding Density (%)
S5_scaffold_8134_curated Species: Polymorphum gilvum (50%)	2	2038 bp	65.65	1.00	95.24
S5_scaffold_15159_curated Species: RBG_16_Alphaproteobacteria_64_48_curated (100%)	2	1212 bp	67.74	1.00	103.22
S5_scaffold_7761_curated Species: Mesorhizobium sp. STM 4661 (50%)	2	2125 bp	67.48	1.00	93.60
S5_scaffold_11469_curated Species: Microvirga aerilata (50%)	2	1307 bp	68.71	1.00	93.65
S5_scaffold_6048_curated Species: Labrenzia aggregata (50%)	2	2678 bp	64.04	1.00	74.72
S5_scaffold_6356_curated Species: Polymorphum gilvum (100%)	2	3198 bp	63.20	1.00	74.39
S5_scaffold_7620_curated Species: Rhodopseudomonas palustris (50%)	2	2157 bp	67.78	1.00	100.14
S5_scaffold_11104_curated Species: Polymorphum gilvum (50%)	2	1433 bp	67.06	1.00	96.72
S5_scaffold_14216_curated Species: Mesorhizobium sp. ORS3359 (50%)	2	1173 bp	67.95	1.00	97.70
S5_scaffold_17607_curated Species: Agrobacterium tumefaciens (50%)	2	1018 bp	62.28	1.00	80.45
S5_scaffold_15699_curated Species: Skermanella stibiiresistens (50%)	2	1186 bp	66.78	1.00	90.56
S5_scaffold_6986_curated Species: Polymorphum gilvum (50%)	2	2217 bp	67.12	1.00	98.24
S5_scaffold_11609_curated Species: Afipia sp. P52-10 (50%)	2	1599 bp	65.04	1.00	98.50
S5_scaffold_9618_curated Species: Azorhizobium caulinodans (50%)	2	1694 bp	64.99	1.00	81.29
S5_scaffold_5698_curated Species: Macrophomina phaseolina (50%)	2	3111 bp	65.67	1.00	74.93
S5_scaffold_11194_curated Species: Afipia sp. P52-10 (50%)	2	1510 bp	68.87	1.00	100.13
S5_scaffold_7649_curated Species: Afipia broomeae (50%)	2	2207 bp	60.44	1.00	93.38
S5_scaffold_11036_curated Species: Methyloceanibacter caenitepidi (50%)	2	2178 bp	60.01	1.00	44.63
S5_scaffold_15915_curated Species: Afipia felis (50%)	2	1142 bp	53.33	1.00	76.18
S5_scaffold_7958_curated Species: Mesorhizobium sp. SOD10 (50%)	2	1949 bp	67.68	1.00	92.66
S5_scaffold_11094_curated Species: Acidisphaera rubrifaciens (50%)	2	1596 bp	60.09	1.00	89.66
S5_scaffold_9072_curated Species: Loktanella sp. S4079 (50%)	2	1886 bp	65.69	1.00	88.28
S5_scaffold_17699_curated Species: Mesorhizobium sp. LSJC280B00 (50%)	2	1917 bp	67.14	1.00	90.77
S5_scaffold_14905_curated Species: Afipia clevelandensis (50%)	2	1133 bp	52.52	1.00	63.02
S5_scaffold_8579_curated Species: Brucella sp. BO2 (50%)	2	1936 bp	67.15	1.00	83.37
S5_scaffold_13134_curated Species: Mesorhizobium ciceri (50%)	2	1400 bp	63.00	1.00	96.21
S5_scaffold_8675_curated Species: Polymorphum gilvum (50%)	2	1790 bp	66.70	1.00	87.32
S5_scaffold_16021_curated Species: Devosia geojensis (50%)	2	1657 bp	67.65	1.00	99.94
S5_scaffold_12756_curated Species: Tistrella mobilis (50%)	2	2355 bp	61.95	1.00	80.13
S5_scaffold_13470_curated Species: Ahrensia sp. R2A130 (50%)	2	1287 bp	65.27	1.00	83.92
S5_scaffold_5549_curated Species: Afipia broomeae (50%)	2	2912 bp	62.91	1.00	100.03
S5_scaffold_4490_curated Species: Azorhizobium caulinodans (50%)	2	3535 bp	61.36	1.00	80.96
S5_scaffold_4977_curated Species: Rhizobium sp. CF142 (50%)	2	3121 bp	63.51	1.00	97.76
S5_scaffold_4871_curated Species: Microvirga aerilata (50%)	2	3282 bp	68.22	1.00	97.71
S5_scaffold_11856_curated Species: Fulvimarina pelagi (50%)	2	1432 bp	67.32	1.00	89.04
S5_scaffold_17037_curated Species: Devosia sp. DDB001 (50%)	2	1071 bp	64.43	1.00	79.55
S5_scaffold_12874_curated Species: Devosia geojensis (100%)	2	1197 bp	64.83	1.00	100.25
S5_scaffold_12872_curated Species: Polymorphum gilvum (100%)	2	1416 bp	65.18	1.00	97.03
S5_scaffold_15437_curated Species: Nitratireductor basaltis (50%)	2	1190 bp	69.08	1.00	78.66
S5_scaffold_15007_curated Species: Mesorhizobium opportunistum (50%)	2	1146 bp	69.02	1.00	100.26
S5_scaffold_6649_curated Species: Devosia riboflavina (50%)	2	2478 bp	62.63	1.00	95.04
S5_scaffold_10753_curated Species: Devosia geojensis (50%)	2	1556 bp	66.39	1.00	87.92
S5_scaffold_7401_curated Species: Microvirga aerilata (50%)	2	2131 bp	67.06	1.00	74.05
S5_scaffold_7504_curated Species: Brucella inopinata (50%)	2	2086 bp	68.07	1.00	82.55
S5_scaffold_10323_curated Species: Microvirga aerilata (50%)	2	1706 bp	66.71	1.00	91.44
S5_scaffold_12530_curated Species: Sinorhizobium meliloti (50%)	2	1171 bp	68.57	1.00	98.63
S5_scaffold_14551_curated Species: Bradyrhizobium sp. WSM471 (50%)	2	1274 bp	63.34	1.00	55.10
S5_scaffold_9212_curated Species: Azorhizobium caulinodans (50%)	2	1875 bp	76.21	1.00	100.96
S5_scaffold_4150_curated Species: Polymorphum gilvum (50%)	2	3779 bp	69.20	1.00	92.09
S5_scaffold_4866_curated Species: Mesorhizobium sp. L48C026A00 (50%)	2	3284 bp	65.16	1.00	87.88

Displaying items 651-700 of 756 in total

S5_Rhizobiales_66_15_curated

FUEL_CELL_S5_Rhizobiales_65_1

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

S5_Rhizobiales_66_15_curated

FUEL_CELL_S5_Rhizobiales_65_1

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

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