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S7_scaffold_360_curated

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Displaying 30 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S7_scaffold_360_curated_1
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(3..581)
DNA (579bp) protein (193aa)
30S ribosomal protein S1 n=1 Tax=Acidovorax sp. KKS102 RepID=K0I5E3_9BURK rbh
rpsA; 30S ribosomal protein S1 rbh
30S ribosomal protein S1 {ECO:0000256|PIRNR:PIRNR002111}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
S7_scaffold_360_curated_2
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(788..2830)
DNA (2043bp) protein (681aa)
bifunctional 3-phosphoshikimate 1-carboxyvinyltransferase/cytidine monophosphate kinase (EC:2.7.4.14) rbh
3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Acidovorax radicis RepID=UPI00023766D9 rbh
Tax=GWA2_Burkholderiales_64_37_curated
S7_scaffold_360_curated_3
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2966..3838)
DNA (873bp) protein (291aa)
Prephenate dehydrogenase n=1 Tax=Acidovorax sp. NO-1 RepID=H0BZY4_9BURK rbh
prephenate dehydrogenase rbh
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
S7_scaffold_360_curated_4
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3851..4948)
DNA (1098bp) protein (366aa)
Chorismate mutase n=1 Tax=Acidovorax sp. KKS102 RepID=K0IAY0_9BURK rbh
chorismate mutase rbh
Tax=GWA2_Burkholderiales_64_37_curated
S7_scaffold_360_curated_5
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5003..6112)
DNA (1110bp) protein (370aa)
3-phosphoserine/phosphohydroxythreonine aminotransferase (EC:2.6.1.52) rbh
Phosphoserine aminotransferase n=1 Tax=Acidovorax sp. NO-1 RepID=H0BZY6_9BURK rbh
Tax=GWA2_Burkholderiales_64_37_curated
S7_scaffold_360_curated_6
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(6220..8886)
DNA (2667bp) protein (889aa)
DNA gyrase subunit A n=1 Tax=Acidovorax radicis RepID=UPI00023766D5 rbh
DNA gyrase subunit A rbh
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
S7_scaffold_360_curated_7
unknown

Not on your lists

9289..9405
DNA (117bp) protein (39aa)

This feature has no annotations

S7_scaffold_360_curated_8
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9402..9752
DNA (351bp) protein (117aa)
OmpA/MotB domain-containing protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0BZY9_9BURK
OmpA/MotB protein
Tax=GWA2_Burkholderiales_64_37_curated
S7_scaffold_360_curated_9
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9846..10556
DNA (711bp) protein (237aa)
bifunctional 3-demethylubiquinone-9 3-methyltransferase/2-octaprenyl-6-hydroxy phenol methylase (EC:2.1.1.64) rbh
3-demethylubiquinone-9 3-methyltransferase n=1 Tax=Acidovorax radicis RepID=UPI00023766D3 rbh
Tax=GWA2_Burkholderiales_64_37_curated
S7_scaffold_360_curated_10
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10567..11232
DNA (666bp) protein (222aa)
phosphoglycolate phosphatase n=1 Tax=Acidovorax radicis RepID=UPI00023766D2 rbh
phosphoglycolate phosphatase rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
S7_scaffold_360_curated_11
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12500..12760
DNA (261bp) protein (87aa)
Uncharacterized protein n=2 Tax=Acidovorax RepID=A1W8T8_ACISJ
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
S7_scaffold_360_curated_12
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12910..13221
DNA (312bp) protein (104aa)
Putative uncharacterized protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0BZZ2_9BURK
hypothetical protein
Tax=GWA2_Burkholderiales_64_37_curated
S7_scaffold_360_curated_13
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13387..13590
DNA (204bp) protein (68aa)
Putative uncharacterized protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0BZZ3_9BURK
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
S7_scaffold_360_curated_14
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13631..13906
DNA (276bp) protein (92aa)
hypothetical protein n=1 Tax=Acidovorax radicis RepID=UPI0002376372
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
S7_scaffold_360_curated_15
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14066..14533
DNA (468bp) protein (156aa)
hypothetical protein n=1 Tax=Acidovorax radicis RepID=UPI0002376371
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
S7_scaffold_360_curated_16
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14533..14877
DNA (345bp) protein (115aa)
hypothetical protein n=1 Tax=Acidovorax radicis RepID=UPI0002376370
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
S7_scaffold_360_curated_17
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14895..15623
DNA (729bp) protein (243aa)
response regulator n=1 Tax=Acidovorax radicis RepID=UPI000237636F rbh
two component transcriptional regulator rbh
Tax=GWA2_Burkholderiales_64_37_curated
S7_scaffold_360_curated_18
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15620..17032
DNA (1413bp) protein (471aa)
histidine kinase n=1 Tax=Acidovorax radicis RepID=UPI000237636E rbh
integral membrane sensor signal transduction histidine kinase rbh
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
S7_scaffold_360_curated_19
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17417..18382
DNA (966bp) protein (322aa)
Extracellular solute-binding protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0IAX4_9BURK rbh
extracellular solute-binding protein rbh
Tax=GWA2_Burkholderiales_64_37_curated
S7_scaffold_360_curated_20
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18405..19241
DNA (837bp) protein (279aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T7S6_ACIDE rbh
binding-protein-dependent transport system inner membrane protein rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
S7_scaffold_360_curated_21
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19238..20017
DNA (780bp) protein (260aa)
ABC transporter ATP-binding protein n=1 Tax=Acidovorax radicis RepID=UPI000237636B rbh
taurine-transporting ATPase rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
S7_scaffold_360_curated_22
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20032..20850
DNA (819bp) protein (273aa)
histidine utilization repressor n=1 Tax=Acidovorax radicis RepID=UPI000237636A rbh
histidine utilization repressor rbh
Tax=GWA2_Burkholderiales_64_37_curated
S7_scaffold_360_curated_23
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20917..22458
DNA (1542bp) protein (514aa)
histidine ammonia-lyase (EC:4.3.1.3) rbh
Histidine ammonia-lyase n=1 Tax=Acidovorax sp. NO-1 RepID=H0C003_9BURK rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
S7_scaffold_360_curated_24
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22498..24222
DNA (1725bp) protein (575aa)
urocanate hydratase (EC:4.2.1.49) rbh
Urocanate hydratase n=1 Tax=Acidovorax sp. NO-1 RepID=H0C004_9BURK rbh
Tax=GWA2_Burkholderiales_64_37_curated
S7_scaffold_360_curated_25
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24326..25072
DNA (747bp) protein (249aa)
Transcriptional regulator, IclR family n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T2S1_ACIDE rbh
IclR family transcriptional regulator rbh
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
S7_scaffold_360_curated_26
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25105..25854
DNA (750bp) protein (250aa)
ABC transporter permease n=1 Tax=Acidovorax radicis RepID=UPI0002376366 rbh
extracellular solute-binding protein rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
S7_scaffold_360_curated_27
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25884..26552
DNA (669bp) protein (223aa)
ABC transporter permease n=1 Tax=Acidovorax radicis RepID=UPI0002376365 rbh
amino acid ABC transporter permease rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
S7_scaffold_360_curated_28
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26549..27343
DNA (795bp) protein (265aa)
ABC transporter related protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T2R8_ACIDE rbh
ABC transporter rbh
Tax=GWA2_Burkholderiales_64_37_curated
S7_scaffold_360_curated_29
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27405..28295
DNA (891bp) protein (297aa)
phytanoyl-CoA dioxygenase n=1 Tax=Acidovorax radicis RepID=UPI0002376363 rbh
Phytanoyl-CoA dioxygenase rbh
Tax=GWA2_Burkholderiales_64_37_curated
S7_scaffold_360_curated_30
Bradyrhizobium sp. CCGE-LA001, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28563..29342
DNA (780bp) protein (260aa)
LacI family transcriptional regulator n=1 Tax=Bradyrhizobium japonicum RepID=UPI00037CD777 rbh
Transcriptional regulator {ECO:0000313|EMBL:EJZ35446.1}; Flags: Fragment;; TaxID=1223566 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. CCGE-LA001.;"
transcriptional regulator rbh
Displaying 30 items

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