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S7_scaffold_333_curated

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Displaying 30 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S7_scaffold_333_curated_1
unknown

Not on your lists

2..73
DNA (72bp) protein (24aa)

This feature has no annotations

S7_scaffold_333_curated_2
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(115..999)
DNA (885bp) protein (295aa)
ABC transporter permease n=1 Tax=Acidovorax radicis RepID=UPI0002377EF0 rbh
ABC transporter permease
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
S7_scaffold_333_curated_3
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1086..1601
DNA (516bp) protein (172aa)
MarR family transcriptional regulator n=1 Tax=Acidovorax radicis RepID=UPI0002377EEF rbh
MarR family transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
S7_scaffold_333_curated_4
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1640..2401
DNA (762bp) protein (254aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Acidovorax sp. NO-1 RepID=H0C0I5_9BURK rbh
short-chain dehydrogenase/reductase sdr rbh
Tax=GWA2_Burkholderiales_64_37_curated
S7_scaffold_333_curated_5
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2494..3678
DNA (1185bp) protein (395aa)
acetyl-CoA acetyltransferase (EC:2.3.1.9) rbh
Beta-ketothiolase n=1 Tax=Acidovorax sp. NO-1 RepID=H0C0I6_9BURK rbh
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
S7_scaffold_333_curated_6
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3853..4836
DNA (984bp) protein (328aa)
LacI family transcriptional regulator n=1 Tax=Acidovorax radicis RepID=UPI0002377EEC rbh
hypothetical protein rbh
Tax=GWA2_Burkholderiales_64_37_curated
S7_scaffold_333_curated_7
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5079..5897
DNA (819bp) protein (273aa)
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_01401};; Peptide-methionine (S)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
peptide methionine sulfoxide reductase (EC:1.8.4.11)
Peptide methionine sulfoxide reductase MsrA n=1 Tax=Acidovorax sp. NO-1 RepID=H0C0I8_9BURK rbh
S7_scaffold_333_curated_8
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5985..6422)
DNA (438bp) protein (146aa)
universal stress protein UspA n=1 Tax=Acidovorax radicis RepID=UPI0002377EEB
UspA domain-containing protein
Tax=GWA2_Burkholderiales_64_37_curated
S7_scaffold_333_curated_9
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6560..7336)
DNA (777bp) protein (259aa)
hypothetical protein n=1 Tax=Acidovorax radicis RepID=UPI0002377EEA rbh
hypothetical protein rbh
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
S7_scaffold_333_curated_10
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7632..8117)
DNA (486bp) protein (162aa)
hypothetical protein n=1 Tax=Acidovorax radicis RepID=UPI0002377EE9 rbh
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
S7_scaffold_333_curated_11
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8351..11314)
DNA (2964bp) protein (988aa)
diguanylate cyclase n=1 Tax=Acidovorax radicis RepID=UPI0002377EE8 rbh
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
Tax=GWA2_Burkholderiales_64_37_curated
S7_scaffold_333_curated_12
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11459..11833
DNA (375bp) protein (125aa)
pilus biosynthesis protein PilZ n=1 Tax=Acidovorax radicis RepID=UPI0002377EE7
type IV pilus assembly PilZ
Tax=GWA2_Burkholderiales_64_37_curated
S7_scaffold_333_curated_13
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11949..13634)
DNA (1686bp) protein (562aa)
long-chain-fatty-acid--CoA ligase (EC:2.3.1.86) rbh
Long-chain-fatty-acid--CoA ligase n=1 Tax=Acidovorax sp. NO-1 RepID=H0C0J4_9BURK rbh
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
S7_scaffold_333_curated_14
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13868..14224
DNA (357bp) protein (119aa)
hypothetical protein n=1 Tax=Acidovorax radicis RepID=UPI0002376644
hypothetical protein
Tax=GWA2_Burkholderiales_64_37_curated
S7_scaffold_333_curated_15
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14248..18327)
DNA (4080bp) protein (1360aa)
ATP-dependent helicase n=1 Tax=Acidovorax radicis RepID=UPI0002376643 rbh
ATP-dependent helicase HrpA rbh
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
S7_scaffold_333_curated_16
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18467..20329
DNA (1863bp) protein (621aa)
beta-lactamase n=1 Tax=Acidovorax radicis RepID=UPI0002376642 rbh
beta-lactamase rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
S7_scaffold_333_curated_17
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20661..20912
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I1V8_9BURK
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
S7_scaffold_333_curated_18
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20935..22965
DNA (2031bp) protein (677aa)
peptidase M41 n=1 Tax=Acidovorax radicis RepID=UPI0002376640 rbh
peptidase m41 rbh
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
S7_scaffold_333_curated_19
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23049..24395
DNA (1347bp) protein (449aa)
N-acetylglutamate synthase (EC:2.3.1.1) rbh
Amino-acid acetyltransferase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HZT7_9BURK rbh
Tax=GWA2_Burkholderiales_64_37_curated
S7_scaffold_333_curated_20
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24541..25428)
DNA (888bp) protein (296aa)
Beta-lactamase n=1 Tax=Acidovorax sp. NO-1 RepID=H0BW75_9BURK rbh
beta-lactamase rbh
Tax=GWA2_Burkholderiales_64_37_curated
S7_scaffold_333_curated_21
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25556..26467
DNA (912bp) protein (304aa)
LysR family transcriptional regulator n=1 Tax=Acidovorax sp. NO-1 RepID=H0BW74_9BURK rbh
LysR family transcriptional regulator rbh
Tax=GWA2_Burkholderiales_64_37_curated
S7_scaffold_333_curated_22
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26541..27146)
DNA (606bp) protein (202aa)
Transcriptional regulator, TetR family id=1357145 bin=GWE1_T_denit_62_9 species=unknown genus=Pseudogulbenkiania taxon_order=Neisseriales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=GWE1_Thiobacillus_62_9_curated
S7_scaffold_333_curated_23
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27261..28667)
DNA (1407bp) protein (469aa)
multidrug transporter n=1 Tax=Variovorax paradoxus RepID=UPI000364552E rbh
cmeC; RND efflux system, outer membrane lipoprotein CmeC rbh
Tax=GWA2_Burkholderiales_64_37_curated
S7_scaffold_333_curated_24
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28669..31830)
DNA (3162bp) protein (1054aa)
multidrug transporter n=1 Tax=Variovorax paradoxus RepID=UPI00036690EA rbh
acrB; component of acridine efflux pump, multidrug efflux system rbh
Tax=GWA2_Burkholderiales_64_37_curated
S7_scaffold_333_curated_25
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31851..33125)
DNA (1275bp) protein (425aa)
RND transporter n=1 Tax=Variovorax paradoxus RepID=UPI0003758990 rbh
RND family efflux transporter MFP subunit rbh
Tax=GWA2_Burkholderiales_64_37_curated
S7_scaffold_333_curated_26
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33295..33927
DNA (633bp) protein (211aa)
Transcriptional regulator TetR family n=1 Tax=Janthinobacterium sp. HH01 RepID=L9PLV4_9BURK
regulatory protein, TetR
Tax=GWA2_Burkholderiales_64_37_curated
S7_scaffold_333_curated_27
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34073..35713)
DNA (1641bp) protein (547aa)
Metal dependent phosphohydrolase with GAF sensor n=1 Tax=Acidovorax sp. NO-1 RepID=H0BW73_9BURK rbh
Metal dependent phosphohydrolase with GAF sensor {ECO:0000313|EMBL:EHL23452.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
metal dependent phosphohydrolase with GAF sensor rbh
S7_scaffold_333_curated_28
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35806..36807
DNA (1002bp) protein (334aa)
hypothetical protein n=1 Tax=Acidovorax radicis RepID=UPI00023762E0 rbh
rhodanese-like protein rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
S7_scaffold_333_curated_29
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36804..37517
DNA (714bp) protein (238aa)
glutathione S-transferase n=1 Tax=Acidovorax radicis RepID=UPI00023762DF rbh
glutaredoxin rbh
Tax=GWA2_Burkholderiales_64_37_curated
S7_scaffold_333_curated_30
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37519..38727
DNA (1209bp) protein (403aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2DL65_9BACT rbh
diguanylate cyclase rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
Displaying 30 items

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