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S7_scaffold_635_curated

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Displaying 27 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S7_scaffold_635_curated_1
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..323)
DNA (321bp) protein (107aa)
4-hydroxyphenylpyruvate dioxygenase n=1 Tax=Acidovorax radicis RepID=UPI0002375FB3
4-hydroxyphenylpyruvate dioxygenase
Tax=GWA2_Burkholderiales_64_37_curated
S7_scaffold_635_curated_2
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(360..1271)
DNA (912bp) protein (304aa)
shikimate 5-dehydrogenase (EC:1.1.1.25) rbh
Shikimate dehydrogenase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HYT0_9BURK rbh
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
S7_scaffold_635_curated_3
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1355..2359)
DNA (1005bp) protein (335aa)
TRAP dicarboxylate transporter subunit DctP n=1 Tax=Acidovorax sp. KKS102 RepID=K0IAJ0_9BURK rbh
TRAP dicarboxylate transporter subunit DctP rbh
TRAP dicarboxylate transporter subunit DctP {ECO:0000313|EMBL:AFU48329.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
S7_scaffold_635_curated_4
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2434..3714)
DNA (1281bp) protein (427aa)
TRAP dicarboxylate transporter subunit DctM n=1 Tax=Acidovorax sp. KKS102 RepID=K0I6S7_9BURK rbh
TRAP dicarboxylate transporter subunit DctM rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
S7_scaffold_635_curated_5
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3738..4325)
DNA (588bp) protein (196aa)
C4-dicarboxylate ABC transporter permease n=1 Tax=Acidovorax radicis RepID=UPI0002375FAF rbh
tripartite ATP-independent periplasmic transporter DctQ component rbh
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
S7_scaffold_635_curated_6
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4507..5223)
DNA (717bp) protein (239aa)
TetR family transcriptional regulator n=1 Tax=Acidovorax sp. KKS102 RepID=K0I543_9BURK rbh
TetR family transcriptional regulator rbh
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
S7_scaffold_635_curated_7
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5293..5907)
DNA (615bp) protein (205aa)
glutathione S-transferase n=1 Tax=Acidovorax radicis RepID=UPI0002375FAD rbh
glutathione S-transferase domain-containing protein rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
S7_scaffold_635_curated_8
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6027..7406
DNA (1380bp) protein (460aa)
adenylosuccinate lyase (EC:4.3.2.2) rbh
Adenylosuccinate lyase n=1 Tax=Acidovorax sp. NO-1 RepID=H0BUS0_9BURK rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
S7_scaffold_635_curated_9
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7593..8153
DNA (561bp) protein (187aa)
Yaeq family protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0BUR9_9BURK rbh
yaeq family protein rbh
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
S7_scaffold_635_curated_10
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8229..8534)
DNA (306bp) protein (102aa)
hypothetical protein n=1 Tax=Acidovorax radicis RepID=UPI0002375FAA
hypothetical protein
Tax=GWA2_Burkholderiales_64_37_curated
S7_scaffold_635_curated_11
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8629..9069)
DNA (441bp) protein (147aa)
hypothetical protein n=1 Tax=Acidovorax radicis RepID=UPI0002375FA9
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
S7_scaffold_635_curated_12
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9403..10320
DNA (918bp) protein (306aa)
Membrane protein {ECO:0000313|EMBL:KJA12282.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
integral membrane protein TerC id=12550702 bin=BDI species=Acidovorax citrulli genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
integral membrane protein TerC rbh
S7_scaffold_635_curated_13
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10399..10857
DNA (459bp) protein (153aa)
hypothetical protein n=1 Tax=Acidovorax radicis RepID=UPI0002375FA7
hypothetical protein
Tax=GWA2_Burkholderiales_64_37_curated
S7_scaffold_635_curated_14
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10944..11297
DNA (354bp) protein (118aa)
membrane protein n=1 Tax=Acidovorax radicis RepID=UPI0002375FA6
hypothetical protein
Tax=GWA2_Burkholderiales_64_37_curated
S7_scaffold_635_curated_15
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11265..12824)
DNA (1560bp) protein (520aa)
peptidase M48 n=1 Tax=Acidovorax radicis RepID=UPI0002375FA5 rbh
peptidase M48 Ste24p rbh
Tax=GWA2_Burkholderiales_64_37_curated
S7_scaffold_635_curated_16
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12925..13419
DNA (495bp) protein (165aa)
Cyclic pyranopterin monophosphate synthase accessory protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0BUR2_9BURK
molybdenum cofactor biosynthesis protein C
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
S7_scaffold_635_curated_17
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13565..16573
DNA (3009bp) protein (1003aa)
Spermine/spermidine synthase n=1 Tax=Cardiobacterium valvarum F0432 RepID=G9ZBW0_9GAMM rbh
spermine/spermidine synthase family protein rbh
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
S7_scaffold_635_curated_18
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16614..17393)
DNA (780bp) protein (260aa)
Fimbrial assembly protein n=1 Tax=Neisseria macacae ATCC 33926 RepID=F9ET23_9NEIS
fimbrial assembly protein
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
S7_scaffold_635_curated_19
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17457..17996)
DNA (540bp) protein (180aa)
Type IV pilin structural subunit n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TXS8_ALIDB
type IV pilin structural subunit
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
S7_scaffold_635_curated_20
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18480..18776)
DNA (297bp) protein (99aa)
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
S7_scaffold_635_curated_21
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18867..19658)
DNA (792bp) protein (264aa)
Cyclic-AMP phosphodiesterase n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TXS9_ALIDB rbh
cyclic-amp phosphodiesterase rbh
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
S7_scaffold_635_curated_22
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19692..21953)
DNA (2262bp) protein (754aa)
guanylate cyclase n=1 Tax=Acidovorax radicis RepID=UPI0002375C56 rbh
adenylate/guanylate cyclase with chase sensor rbh
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
S7_scaffold_635_curated_23
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22017..22670)
DNA (654bp) protein (218aa)
signal peptide protein n=1 Tax=Acidovorax radicis RepID=UPI0002375C55 rbh
FHA domain-containing protein rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
S7_scaffold_635_curated_24
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22715..23524)
DNA (810bp) protein (270aa)
Protein serine/threonine phosphatase n=1 Tax=Acidovorax sp. NO-1 RepID=H0BUQ5_9BURK rbh
protein serine/threonine phosphatase rbh
Tax=GWA2_Burkholderiales_64_37_curated
S7_scaffold_635_curated_25
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23521..26151)
DNA (2631bp) protein (877aa)
serine/threonine protein kinase n=1 Tax=Acidovorax radicis RepID=UPI0002375C53 rbh
serine/threonine protein kinase rbh
Tax=GWA2_Burkholderiales_64_37_curated
S7_scaffold_635_curated_26
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26512..27408)
DNA (897bp) protein (299aa)
succinyl-CoA synthetase subunit alpha (EC:6.2.1.5) rbh
Succinyl-CoA ligase [ADP-forming] subunit alpha n=1 Tax=Acidovorax sp. NO-1 RepID=H0BUQ3_9BURK rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
S7_scaffold_635_curated_27
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27424..27648)
DNA (225bp) protein (75aa)
sucC; succinyl-CoA synthetase subunit beta (EC:6.2.1.5)
Succinyl-CoA ligase [ADP-forming] subunit beta {ECO:0000256|HAMAP-Rule:MF_00558}; EC=6.2.1.5 {ECO:0000256|HAMAP-Rule:MF_00558};; Succinyl-CoA synthetase subunit beta {ECO:0000256|HAMAP-Rule:MF_00558}; Flags: Precursor;; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
Succinyl-CoA ligase [ADP-forming] subunit beta n=1 Tax=Acidovorax sp. CF316 RepID=J0K510_9BURK
Displaying 27 items

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