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S7_scaffold_82_curated

Search features with annotation key words

Displaying items 1-30 of 90 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S7_scaffold_82_curated_1
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..582
DNA (582bp) protein (194aa)
Chemotaxis sensory transducer n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P517_9BACT
Methyl-accepting chemotaxis protein
Tax=CG_Rhodof_02
S7_scaffold_82_curated_2
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

606..1148
DNA (543bp) protein (181aa)
CheW domain protein n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P518_9BACT
CheW protein
CheW protein {ECO:0000313|EMBL:ABD68651.1}; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118); (Albidiferax ferrireducens).;"
S7_scaffold_82_curated_3
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1175..2794
DNA (1620bp) protein (540aa)
Methyl-accepting chemotaxis protein n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HVP6_RUBGI rbh
mcp; methyl-accepting chemotaxis protein rbh
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:BAL97083.1}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
S7_scaffold_82_curated_4
Azoarcus sp. BH72, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2821..3369
DNA (549bp) protein (183aa)
CheW domain protein n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P518_9BACT
CheW protein
Probable positive regulator of CheA protein activity {ECO:0000313|EMBL:CAL93022.1}; TaxID=62928 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. (strain BH72).;"
S7_scaffold_82_curated_5
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3366..4220
DNA (855bp) protein (285aa)
Chemotaxis protein methyltransferase {ECO:0000256|PIRNR:PIRNR000410}; EC=2.1.1.80 {ECO:0000256|PIRNR:PIRNR000410};; TaxID=640081 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azospira.;" source="Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) (Dechlorosoma; suillum).;"
Protein-glutamate O-methyltransferase n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P519_9BACT rbh
methylase of chemotaxis methyl-accepting protein
S7_scaffold_82_curated_6
Pseudomonas sp. HPB0071, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4260..5324
DNA (1065bp) protein (355aa)
Chemotaxis response regulator protein-glutamate methylesterase {ECO:0000256|HAMAP-Rule:MF_00099}; EC=3.1.1.61 {ECO:0000256|HAMAP-Rule:MF_00099};; TaxID=1203578 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. HPB0071.;"
Chemotaxis response regulator protein-glutamate methylesterase n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P520_9BACT rbh
CheB protein rbh
S7_scaffold_82_curated_7
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5514..6752
DNA (1239bp) protein (413aa)
ATP-binding region ATPase domain protein n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P5L2_9BACT rbh
signal transduction histidine kinase
Signal transduction histidine kinase {ECO:0000313|EMBL:BAP55265.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
S7_scaffold_82_curated_8
Geobacter sp. OR-1, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6755..7249
DNA (495bp) protein (165aa)
Probable chemoreceptor glutamine deamidase CheD {ECO:0000256|HAMAP-Rule:MF_01440}; EC=3.5.1.44 {ECO:0000256|HAMAP-Rule:MF_01440};; TaxID=1266765 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. OR-1.;"
Probable chemoreceptor glutamine deamidase CheD n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P5L1_9BACT
chemotaxis protein CheD
S7_scaffold_82_curated_9
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(7255..8064)
DNA (810bp) protein (270aa)
hypothetical protein n=1 Tax=Rubritalea marina RepID=UPI0003642325
FKBP-type peptidylprolyl isomerase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
S7_scaffold_82_curated_10
unknown

Not on your lists

comp(8128..9255)
DNA (1128bp) protein (376aa)
Type IV pilus assembly PilZ n=1 Tax=Holophaga foetida DSM 6591 RepID=H1NXW9_9BACT rbh
S7_scaffold_82_curated_11
unknown

Not on your lists

comp(9255..10385)
DNA (1131bp) protein (377aa)
Type IV pilus assembly PilZ n=1 Tax=Holophaga foetida DSM 6591 RepID=H1NXX0_9BACT rbh
S7_scaffold_82_curated_12
unknown

Not on your lists

10489..11604
DNA (1116bp) protein (372aa)
Type IV pilus assembly PilZ n=1 Tax=Holophaga foetida DSM 6591 RepID=H1NXX1_9BACT rbh
S7_scaffold_82_curated_13
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11601..13253
DNA (1653bp) protein (551aa)
Radical SAM domain protein n=1 Tax=Holophaga foetida DSM 6591 RepID=H1NXX2_9BACT rbh
radical SAM domain-containing iron-sulfur cluster-binding oxidoreductase rbh
Radical SAM domain iron-sulfur cluster-binding oxidoreductase with cobalamin-binding-like domain and TPR domain {ECO:0000313|EMBL:AAR34201.1}; TaxID=243231 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA).;"
S7_scaffold_82_curated_14
Halanaerobium praevalens, Halanaerobium, Halanaerobiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13348..13893
DNA (546bp) protein (182aa)
bifunctional pyrimidine regulatory protein PyrR/uracil phosphoribosyltransferase (EC:2.4.2.9)
Bifunctional protein PyrR n=1 Tax=Holophaga foetida DSM 6591 RepID=H1NW60_9BACT
Bifunctional protein PyrR {ECO:0000256|HAMAP-Rule:MF_01219}; TaxID=572479 species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halanaerobiaceae; Halanaerobium.;" source="Halanaerobium praevalens (strain ATCC 33744 / DSM 2228 / GSL).;"
S7_scaffold_82_curated_15
RLO_Nitrospirae_42_9, Nitrospirae, Bacteria

Not on your lists

13895..14854
DNA (960bp) protein (320aa)
Aspartate carbamoyltransferase n=1 Tax=Holophaga foetida DSM 6591 RepID=H1NW61_9BACT rbh
aspartate carbamoyltransferase rbh
Tax=RifCSPlowO2_12_Nitrospirae_42_9_curated
S7_scaffold_82_curated_16
unknown

Not on your lists

14917..15597
DNA (681bp) protein (227aa)

This feature has no annotations

S7_scaffold_82_curated_17
Cyanothece sp. PCC 8801, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(15652..16077)
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Holophaga foetida DSM 6591 RepID=H1NY71_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACK66510.1}; TaxID=41431 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain PCC 8801) (Synechococcus sp. (strain PCC 8801 /; RF-1)).;"
S7_scaffold_82_curated_18
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(16230..18557)
DNA (2328bp) protein (776aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00036D9FDF rbh
band 7 protein
Band 7 protein {ECO:0000313|EMBL:AKD56502.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
S7_scaffold_82_curated_19
unknown

Not on your lists

18836..19294
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P4K1_9BACT
S7_scaffold_82_curated_20
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

19285..21345
DNA (2061bp) protein (687aa)
Peptidoglycan-N-acetylmuramate O-acetyltransferase n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P4K0_9BACT rbh
acyltransferase 3 rbh
Acyltransferase 3 {ECO:0000313|EMBL:ACZ38159.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
S7_scaffold_82_curated_21
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

21348..22652
DNA (1305bp) protein (435aa)
Uncharacterized protein n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P4J9_9BACT rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ88296.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
S7_scaffold_82_curated_22
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

22709..24001
DNA (1293bp) protein (431aa)
Uncharacterized protein n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P4J8_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:ABJ88296.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
hypothetical protein
S7_scaffold_82_curated_23
unknown

Not on your lists

24169..24891
DNA (723bp) protein (241aa)

This feature has no annotations

S7_scaffold_82_curated_24
GWC2_Spirochaetes_52_13_curated, Spirochaetes, Bacteria

Not on your lists

comp(24974..25141)
DNA (168bp) protein (56aa)
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein id=4335158 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta coccoides genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
4Fe-4S ferredoxin
Tax=GWC2_Spirochaetes_52_13_curated
S7_scaffold_82_curated_25
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25200..26123)
DNA (924bp) protein (308aa)
Transcriptional regulator, LysR family n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HCA5_ANADF rbh
LysR family transcriptional regulator rbh
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ABS26351.1}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain Fw109-5).;"
S7_scaffold_82_curated_26
Anaeromyxobacter sp. K, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26237..26773
DNA (537bp) protein (179aa)
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UA86_ANASK rbh
alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen rbh
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen {ECO:0000313|EMBL:ACG71566.1}; TaxID=447217 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain K).;"
S7_scaffold_82_curated_27
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26776..27300
DNA (525bp) protein (175aa)
Alkyl hydroperoxide reductase AhpD n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=AHPD_ANADE
Alkylhydroperoxidase protein D {ECO:0000313|EMBL:AKF05370.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
alkylhydroperoxidase
S7_scaffold_82_curated_28
unknown

Not on your lists

27535..28329
DNA (795bp) protein (265aa)
Uncharacterized protein n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P3P4_9BACT
S7_scaffold_82_curated_29
unknown

Not on your lists

comp(28347..28520)
DNA (174bp) protein (58aa)
Uncharacterized protein n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P288_9BACT
S7_scaffold_82_curated_30
BJP_IG2102_Ignavibacteriales_35_8, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(28523..29023)
DNA (501bp) protein (167aa)
Bacterioferritin n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P287_9BACT
Ferritin Dps family protein
Tax=BJP_IG2102_Ignavibacteriales_35_8
Displaying items 1-30 of 90 in total

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