ggKbase home page

S8_scaffold_285_curated

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S8_scaffold_285_curated_1
BJP_IG2069_Bacteroidetes_43_11, Bacteroidetes, Bacteria

Not on your lists

comp(1..465)
DNA (465bp) protein (155aa)
dTDP-glucose 4,6-dehydratase n=1 Tax=uncultured bacterium RepID=K1YIY2_9BACT
dTDP-glucose 4,6-dehydratase
Tax=BJP_IG2069_Bacteroidetes_43_11
S8_scaffold_285_curated_2
BJP_IG2069_Bacteroidetes_43_11, Bacteroidetes, Bacteria

Not on your lists

comp(431..754)
DNA (324bp) protein (108aa)
dTDP-glucose 4,6-dehydratase n=1 Tax=Butyricimonas synergistica RepID=UPI00035D0660
dTDP-glucose 4,6-dehydratase
Tax=BJP_IG2069_Bacteroidetes_43_11
S8_scaffold_285_curated_3
BJP_IG2069_Bacteroidetes_43_11, Bacteroidetes, Bacteria

Not on your lists

comp(777..1670)
DNA (894bp) protein (298aa)
dTDP-4-dehydrorhamnose reductase (EC:1.1.1.133) rbh
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1Z400_9BACT rbh
Tax=BJP_IG2069_Bacteroidetes_43_11
S8_scaffold_285_curated_4
BJP_IG2069_Bacteroidetes_43_11, Bacteroidetes, Bacteria

Not on your lists

comp(1687..2253)
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1XPZ5_9BACT
hypothetical protein
Tax=BJP_IG2069_Bacteroidetes_43_11
S8_scaffold_285_curated_5
GWF2_Lentisphaerae_52_8_curated, Lentisphaerae, Bacteria

Not on your lists

comp(2275..3165)
DNA (891bp) protein (297aa)
glucose-1-phosphate thymidylyltransferase (EC:2.7.7.24) rbh
Glucose-1-phosphate thymidylyltransferase id=4039181 bin=GWF2_Lentisphaerae_52_8 species=Odoribacter splanchnicus genus=Odoribacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Lentisphaerae_52_8 organism_group=Lentisphaerae rbh
Tax=GWF2_Lentisphaerae_52_8_curated
S8_scaffold_285_curated_6
BJP_IG2069_Bacteroidetes_43_11, Bacteroidetes, Bacteria

Not on your lists

comp(3206..4219)
DNA (1014bp) protein (338aa)
Patatin family protein id=4039180 bin=GWF2_Lentisphaerae_52_8 species=Sphingobacterium spiritivorum genus=Sphingobacterium taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Lentisphaerae_52_8 organism_group=Lentisphaerae rbh
hypothetical protein rbh
Tax=BJP_IG2069_Bacteroidetes_43_11
S8_scaffold_285_curated_7
GWF2_Lentisphaerae_52_8_curated, Lentisphaerae, Bacteria

Not on your lists

4324..4842
DNA (519bp) protein (173aa)
Ferroxidase id=4039179 bin=GWF2_Lentisphaerae_52_8 species=Ilyobacter polytropus genus=Ilyobacter taxon_order=Fusobacteriales taxon_class=Fusobacteriia phylum=Fusobacteria tax=GWF2_Lentisphaerae_52_8 organism_group=Lentisphaerae rbh
hypothetical protein
Tax=GWF2_Lentisphaerae_52_8_curated
S8_scaffold_285_curated_8
GWF2_Lentisphaerae_52_8_curated, Lentisphaerae, Bacteria

Not on your lists

comp(5907..6770)
DNA (864bp) protein (288aa)
sucD; Succinyl-CoA ligase [ADP-forming] subunit alpha (EC:6.2.1.5)
Succinyl-CoA ligase [ADP-forming] subunit alpha id=4039178 bin=GWF2_Lentisphaerae_52_8 species=unknown genus=Prevotella taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Lentisphaerae_52_8 organism_group=Lentisphaerae rbh
Tax=GWF2_Lentisphaerae_52_8_curated
S8_scaffold_285_curated_9
GWF2_Lentisphaerae_52_8_curated, Lentisphaerae, Bacteria

Not on your lists

comp(6863..8023)
DNA (1161bp) protein (387aa)
sucC; Succinyl-CoA ligase [ADP-forming] subunit beta (EC:6.2.1.5)
Succinyl-CoA ligase [ADP-forming] subunit beta id=4039177 bin=GWF2_Lentisphaerae_52_8 species=unknown genus=Prevotella taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Lentisphaerae_52_8 organism_group=Lentisphaerae rbh
Tax=GWF2_Lentisphaerae_52_8_curated
S8_scaffold_285_curated_10
BJP_IG2069_Bacteroidetes_43_11, Bacteroidetes, Bacteria

Not on your lists

comp(8089..9132)
DNA (1044bp) protein (348aa)
UDP-N-acetylglucosamine 4,6-dehydratase (EC:4.2.1.-)
Uncharacterized protein id=4039176 bin=GWF2_Lentisphaerae_52_8 species=Bacteroides fragilis genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Lentisphaerae_52_8 organism_group=Lentisphaerae
Tax=BJP_IG2069_Bacteroidetes_43_11
S8_scaffold_285_curated_11
BJP_IG2069_Bacteroidetes_43_11, Bacteroidetes, Bacteria

Not on your lists

comp(10120..11466)
DNA (1347bp) protein (449aa)
Putative uncharacterized protein id=3992708 bin=GWF2_Bacteroidetes_40_14 species=Dysgonomonas gadei genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_14 organism_group=Bacteroidetes rbh
hypothetical protein rbh
Tax=BJP_IG2069_Bacteroidetes_43_11
S8_scaffold_285_curated_12
BJP_IG2069_Bacteroidetes_43_11, Bacteroidetes, Bacteria

Not on your lists

11915..12181
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Bacteroides oleiciplenus YIT 12058 RepID=K9DYK5_9BACE
hypothetical protein
Tax=BJP_IG2069_Bacteroidetes_43_11
S8_scaffold_285_curated_13
BJP_IG2069_Bacteroidetes_43_11, Bacteroidetes, Bacteria

Not on your lists

12207..13310
DNA (1104bp) protein (368aa)
Putative uncharacterized protein id=1853630 bin=GWE2_Bacteroidetes_39_28 species=Alistipes indistinctus genus=Alistipes taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_39_28 organism_group=Bacteroidetes
Tax=BJP_IG2069_Bacteroidetes_43_11
S8_scaffold_285_curated_14
BJP_IG2069_Bacteroidetes_43_11, Bacteroidetes, Bacteria

Not on your lists

13422..14678
DNA (1257bp) protein (419aa)
ROK family protein id=3960602 bin=GWF2_Bacteroidetes_38_335 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11
hypothetical protein rbh
Tax=BJP_IG2069_Bacteroidetes_43_11
S8_scaffold_285_curated_15
BJP_IG2069_Bacteroidetes_43_11, Bacteroidetes, Bacteria

Not on your lists

14755..14898
DNA (144bp) protein (48aa)
Tax=BJP_IG2069_Bacteroidetes_43_11
S8_scaffold_285_curated_16
BJP_IG2069_Bacteroidetes_43_11, Bacteroidetes, Bacteria

Not on your lists

14953..18417
DNA (3465bp) protein (1155aa)
hypothetical protein AtheD1_13263 id=2120176 bin=GWE2_Bacteroidetes_40_15 species=Anaerophaga thermohalophila genus=Anaerophaga taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_40_15 organism_group=Bacteroidetes organism_desc=Good + rbh
hypothetical protein rbh
Tax=BJP_IG2069_Bacteroidetes_43_11
S8_scaffold_285_curated_17
BJP_IG2069_Bacteroidetes_43_11, Bacteroidetes, Bacteria

Not on your lists

comp(18698..19912)
DNA (1215bp) protein (405aa)
hypothetical protein
ATP-cone domain-containing protein id=4052632 bin=GWF2_Bacteroidetes_41_61 species=Marinilabilia salmonicolor genus=Marinilabilia taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_61 organism_group=Bacteroidetes organism_desc=a118
Tax=BJP_IG2069_Bacteroidetes_43_11
S8_scaffold_285_curated_18
BJP_IG2069_Bacteroidetes_43_11, Bacteroidetes, Bacteria

Not on your lists

20357..21844
DNA (1488bp) protein (496aa)
Putative uncharacterized protein id=4495971 bin=GWA2_Flavobacterium_35_26 species=Flavobacteria bacterium MS024-3C genus=unknown taxon_order=unknown taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWA2_Flavobacterium_35_26 organism_group=Bacteroidetes organism_desc=Good+ six scaffolds
Tax=BJP_IG2069_Bacteroidetes_43_11
S8_scaffold_285_curated_19
BJP_IG2069_Bacteroidetes_43_11, Bacteroidetes, Bacteria

Not on your lists

comp(22040..23614)
DNA (1575bp) protein (525aa)
Sensor protein n=1 Tax=uncultured bacterium RepID=K1Y5Q0_9BACT rbh
hypothetical protein rbh
Tax=BJP_IG2069_Bacteroidetes_43_11
S8_scaffold_285_curated_20
BJP_IG2069_Bacteroidetes_43_11, Bacteroidetes, Bacteria

Not on your lists

comp(23624..24067)
DNA (444bp) protein (148aa)
Response regulator receiver protein n=1 Tax=uncultured bacterium RepID=K1Y6G4_9BACT
hypothetical protein
Tax=BJP_IG2069_Bacteroidetes_43_11
S8_scaffold_285_curated_21
BJP_IG2069_Bacteroidetes_43_11, Bacteroidetes, Bacteria

Not on your lists

comp(24080..25552)
DNA (1473bp) protein (491aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1XQH6_9BACT rbh
hypothetical protein rbh
Tax=BJP_IG2069_Bacteroidetes_43_11
S8_scaffold_285_curated_22
BJP_IG2069_Bacteroidetes_43_11, Bacteroidetes, Bacteria

Not on your lists

comp(25624..26193)
DNA (570bp) protein (190aa)
Putative transmembrane protein id=4991501 bin=GWA2_Bacteroidetes_42_15 species=Fulvivirga imtechensis genus=Fulvivirga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWA2_Bacteroidetes_42_15 organism_group=Bacteroidetes
hypothetical protein
Tax=BJP_IG2069_Bacteroidetes_43_11
S8_scaffold_285_curated_23
BJP_IG2069_Bacteroidetes_43_11, Bacteroidetes, Bacteria

Not on your lists

comp(26251..28401)
DNA (2151bp) protein (717aa)
TonB-dependent receptor, putative id=4991502 bin=GWA2_Bacteroidetes_42_15 species=Microscilla marina genus=Microscilla taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWA2_Bacteroidetes_42_15 organism_group=Bacteroidetes rbh
hypothetical protein rbh
Tax=BJP_IG2069_Bacteroidetes_43_11
S8_scaffold_285_curated_24
BJP_IG2103_Bacteroidetes_40_10, Bacteroidetes, Bacteria

Not on your lists

comp(29341..29625)
DNA (285bp) protein (95aa)
Transcriptional regulator id=2098184 bin=GWE2_Bacteroidetes_39_28 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_39_28 organism_group=Bacteroidetes
hypothetical protein
Tax=BJP_IG2103_Bacteroidetes_40_10
S8_scaffold_285_curated_25
BJP_IG2103_Bacteroidetes_40_10, Bacteroidetes, Bacteria

Not on your lists

comp(29618..30190)
DNA (573bp) protein (191aa)
Putative uncharacterized protein id=3119743 bin=GWF2_Bacteroidetes_39_10 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_39_10 organism_group=Bacteroidetes
hypothetical protein
Tax=BJP_IG2103_Bacteroidetes_40_10
S8_scaffold_285_curated_26
BJP_IG2069_Bacteroidetes_43_11, Bacteroidetes, Bacteria

Not on your lists

comp(30483..30986)
DNA (504bp) protein (168aa)
id=1902835 bin=GWE2_Bacteroidetes_40_15 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_Bacteroidetes_40_15 organism_group=Bacteroidetes organism_desc=Good +
Tax=BJP_IG2069_Bacteroidetes_43_11
S8_scaffold_285_curated_27
BJP_08E140C01_Bacteroidetes_41_49, Bacteroidetes, Bacteria

Not on your lists

comp(30997..31362)
DNA (366bp) protein (122aa)
Uncharacterized protein id=1902811 bin=GWE2_Bacteroidetes_40_15 species=unknown genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_40_15 organism_group=Bacteroidetes organism_desc=Good +
hypothetical protein
Tax=BJP_08E140C01_Bacteroidetes_41_49
S8_scaffold_285_curated_28
BJP_08E140C01_Bacteroidetes_41_49, Bacteroidetes, Bacteria

Not on your lists

comp(31375..31668)
DNA (294bp) protein (98aa)
Uncharacterized protein id=1902813 bin=GWE2_Bacteroidetes_40_15 species=unknown genus=Parabacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_40_15 organism_group=Bacteroidetes organism_desc=Good +
hypothetical protein
Tax=BJP_08E140C01_Bacteroidetes_41_49
S8_scaffold_285_curated_29
GWF2_Bacteroidetes_40_14_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32296..32850
DNA (555bp) protein (185aa)
Uncharacterized protein id=3992686 bin=GWF2_Bacteroidetes_40_14 species=unknown genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_14 organism_group=Bacteroidetes
Tax=GWF2_Bacteroidetes_40_14_curated
S8_scaffold_285_curated_30
GWF2_Bacteroidetes_40_14_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32843..33496
DNA (654bp) protein (218aa)
Uncharacterized protein id=3992685 bin=GWF2_Bacteroidetes_40_14 species=Bacteroides nordii genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_14 organism_group=Bacteroidetes
hypothetical protein
Tax=GWF2_Bacteroidetes_40_14_curated
Displaying items 1-30 of 36 in total

View Taxonomy