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S9_scaffold_93_curated

Search features with annotation key words

Displaying items 1-30 of 103 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S9_scaffold_93_curated_1
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..619)
DNA (618bp) protein (206aa)
TonB dependent receptor family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R1B9_BREDI
TonB dependent receptor family protein {ECO:0000313|EMBL:EGF94246.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
TonB-dependent receptor
S9_scaffold_93_curated_2
Brevundimonas nasdae, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(619..2022)
DNA (1404bp) protein (468aa)
UDP-N-acetylmuramate--alanine ligase n=1 Tax=alpha proteobacterium L41A RepID=UPI000379F851 rbh
UDP-N-acetylmuramate--alanine ligase {ECO:0000313|EMBL:KIC60431.1}; TaxID=172043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas nasdae.;"
Mur ligase middle domain-containing protein rbh
S9_scaffold_93_curated_3
R_Brevundimonas_70_19, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2040..2912
DNA (873bp) protein (291aa)
LD-carboxypeptidase n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QH44_BREDI rbh
peptidase U61 LD-carboxypeptidase A rbh
Tax=RIFCSPHIGHO2_01_FULL_Brevundimonas_70_19_curated
S9_scaffold_93_curated_4
R_Brevundimonas_70_19, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3141..4088
DNA (948bp) protein (316aa)
Putative uncharacterized protein n=1 Tax=Brevundimonas sp. BAL3 RepID=B4W9I5_9CAUL rbh
peptidase aspartic rbh
Tax=RIFCSPHIGHO2_01_FULL_Brevundimonas_70_19_curated
S9_scaffold_93_curated_5
R_Brevundimonas_70_19, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4090..4938)
DNA (849bp) protein (283aa)
Putative neutral zinc metallopeptidase superfamily n=1 Tax=Brevundimonas sp. BAL3 RepID=B4WCE9_9CAUL rbh
hypothetical protein rbh
Tax=RIFCSPHIGHO2_01_FULL_Brevundimonas_70_19_curated
S9_scaffold_93_curated_6
R_Brevundimonas_70_19, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5024..5413)
DNA (390bp) protein (130aa)
Uncharacterized protein (Fragment) n=1 Tax=Pseudogymnoascus destructans (strain ATCC MYA-4855 / 20631-21) RepID=L8FU09_PSED2
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Brevundimonas_70_19_curated
S9_scaffold_93_curated_7
R_Brevundimonas_70_19, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5499..6431)
DNA (933bp) protein (311aa)
Fatty acid desaturase n=1 Tax=Brevundimonas abyssalis TAR-001 RepID=U2ZHC6_9CAUL rbh
fatty acid desaturase rbh
Tax=RIFCSPHIGHO2_01_FULL_Brevundimonas_70_19_curated
S9_scaffold_93_curated_8
R_Brevundimonas_70_19, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6572..6979
DNA (408bp) protein (136aa)
Putative membrane protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QUM8_BREDI
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Brevundimonas_70_19_curated
S9_scaffold_93_curated_9
R_Brevundimonas_70_19, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6976..7173
DNA (198bp) protein (66aa)
Helix-turn-helix family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QUM7_BREDI
XRE family transcriptional regulator
Tax=RIFCSPHIGHO2_01_FULL_Brevundimonas_70_19_curated
S9_scaffold_93_curated_10
R_Brevundimonas_70_19, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7210..8142
DNA (933bp) protein (311aa)
Esterase sys410 n=1 Tax=uncultured bacterium RepID=H9CDG2_9BACT rbh
alpha/beta hydrolase rbh
Tax=RIFCSPHIGHO2_01_FULL_Brevundimonas_70_19_curated
S9_scaffold_93_curated_11
R_Brevundimonas_70_19, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8159..9013)
DNA (855bp) protein (285aa)
Putative uncharacterized protein n=1 Tax=Brevundimonas subvibrioides (strain ATCC 15264 / DSM 4735 / LMG 14903 / NBRC 16000 / CB 81) RepID=D9QMQ5_BRESC rbh
hypothetical protein rbh
Tax=RIFCSPHIGHO2_01_FULL_Brevundimonas_70_19_curated
S9_scaffold_93_curated_12
R_Brevundimonas_70_19, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9025..10023)
DNA (999bp) protein (333aa)
4-hydroxybenzoate polyprenyl transferase n=1 Tax=Brevundimonas sp. BAL3 RepID=B4WCE2_9CAUL rbh
4-hydroxybenzoate polyprenyl transferase rbh
Tax=RIFCSPHIGHO2_01_FULL_Brevundimonas_70_19_curated
S9_scaffold_93_curated_13
BJP_08E140C01_10KDA_Sphingomonadales_62_47, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10265..11374
DNA (1110bp) protein (370aa)
Uncharacterized protein n=2 Tax=Singulisphaera acidiphila RepID=L0DIT4_SINAD rbh
hypothetical protein rbh
Tax=BJP_08E140C01_10KDA_Sphingomonadales_62_47
S9_scaffold_93_curated_14
Cyanothece sp. ATCC 51142, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(11553..11936)
DNA (384bp) protein (128aa)
Helix-turn-helix domain protein n=2 Tax=Cyanothece RepID=G6GZB9_9CHRO
putative transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:ACB52184.1}; TaxID=43989 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain ATCC 51142).;"
S9_scaffold_93_curated_15
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(11933..12313)
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii PF54_9BACT">RepID=D8PF54_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK41863.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
S9_scaffold_93_curated_16
Brevundimonas sp. BAL3, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12436..15039)
DNA (2604bp) protein (868aa)
DNA ligase D, putative n=1 Tax=Brevundimonas sp. BAL3 RepID=B4WCW1_9CAUL rbh
DNA ligase D, putative {ECO:0000313|EMBL:EDX82046.1}; TaxID=391600 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas sp. BAL3.;"
DNA ligase D rbh
S9_scaffold_93_curated_17
R_Brevundimonas_70_19, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15100..16119)
DNA (1020bp) protein (340aa)
UDP-glucuronate 5'-epimerase n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QER2_BREDI rbh
NAD-dependent epimerase/dehydratase rbh
Tax=RIFCSPHIGHO2_01_FULL_Brevundimonas_70_19_curated
S9_scaffold_93_curated_18
R_Brevundimonas_70_19, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16157..17791)
DNA (1635bp) protein (545aa)
Alpha amylase catalytic region n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VLL0_CAUST rbh
alpha amylase-like protein rbh
Tax=RIFCSPHIGHO2_01_FULL_Brevundimonas_70_19_curated
S9_scaffold_93_curated_19
R_Brevundimonas_70_19, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17905..18507
DNA (603bp) protein (201aa)
UPI0003D018FB related cluster n=1 Tax=unknown RepID=UPI0003D018FB
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Brevundimonas_70_19_curated
S9_scaffold_93_curated_20
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18467..19480)
DNA (1014bp) protein (338aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI00036BFE1E
Peptidase M48 family protein {ECO:0000313|EMBL:GAO39025.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
peptidase M48, Ste24p
S9_scaffold_93_curated_21
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19964..22024
DNA (2061bp) protein (687aa)
Peptidase, S8/S53 family n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QCL4_BREDI rbh
Peptidase, S8/S53 family {ECO:0000313|EMBL:EKY25714.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
peptidase S8/S53 subtilisin kexin sedolisin rbh
S9_scaffold_93_curated_22
Brevundimonas sp. BAL3, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22219..24435
DNA (2217bp) protein (739aa)
N-acylglucosamine 2-epimerase family {ECO:0000313|EMBL:EDX81527.1}; EC=5.1.3.8 {ECO:0000313|EMBL:EDX81527.1};; TaxID=391600 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas sp. BAL3.;"
mannose-1-phosphate guanylyltransferase (EC:5.3.1.8 2.7.7.13) rbh
N-acylglucosamine 2-epimerase family n=1 Tax=Brevundimonas sp. BAL3 RepID=B4WEX6_9CAUL rbh
S9_scaffold_93_curated_23
Brevundimonas sp. BAL3, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24885..25778
DNA (894bp) protein (298aa)
Ser/Thr protein phosphatase family protein n=1 Tax=Brevundimonas sp. BAL3 RepID=B4WEW9_9CAUL
Ser/Thr protein phosphatase family protein {ECO:0000313|EMBL:EDX79756.1}; TaxID=391600 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas sp. BAL3.;"
metallophosphoesterase
S9_scaffold_93_curated_24
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25802..27145)
DNA (1344bp) protein (448aa)
O-antigen polymerase n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JS20_HYPDA
O-antigen polymerase
O-antigen polymerase {ECO:0000313|EMBL:ADJ22279.1}; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB; 11706 / TK 0415).;"
S9_scaffold_93_curated_25
R_Brevundimonas_70_19, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27192..27422)
DNA (231bp) protein (77aa)
Tax=RIFCSPHIGHO2_01_FULL_Brevundimonas_70_19_curated
S9_scaffold_93_curated_26
Arenimonas malthae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27567..28811)
DNA (1245bp) protein (415aa)
Uncharacterized protein {ECO:0000313|EMBL:KFN47921.1}; TaxID=1384054 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas malthae CC-JY-1.;"
Putative uncharacterized protein id=2911406 bin=GWF1_Xanthomonadales_69_6 species=Methylosinus trichosporium genus=Methylosinus taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
hypothetical protein
S9_scaffold_93_curated_27
Arenimonas malthae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28808..31075)
DNA (2268bp) protein (756aa)
exopolysaccharide biosynthesis protein n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B5EBD5 rbh
Uncharacterized protein {ECO:0000313|EMBL:KFN46771.1}; TaxID=1384054 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas malthae CC-JY-1.;"
exopolysaccharide biosynthesis protein
S9_scaffold_93_curated_28
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31245..31856)
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Sphingobium yanoikuyae ATCC 51230 RepID=K9D8M6_SPHYA
Uncharacterized protein {ECO:0000313|EMBL:EKU75267.1}; TaxID=883163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae ATCC 51230.;"
gumB; polysaccharide export protein
S9_scaffold_93_curated_29
Brevundimonas sp. KM4, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32303..34147)
DNA (1845bp) protein (615aa)
UDP-D-quinovosamine 4-dehydrogenase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RF71_PHEZH rbh
Uncharacterized protein {ECO:0000313|EMBL:KJV43318.1}; TaxID=1628191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas sp. KM4.;"
UDP-D-quinovosamine 4-dehydrogenase rbh
S9_scaffold_93_curated_30
Thalassobacter sp. 16PALIMAR09, Thalassobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34473..36602)
DNA (2130bp) protein (710aa)
dehydrogenase n=1 Tax=Halomonas sp. KM-1 RepID=UPI000288B64E rbh
Dehydrogenase {ECO:0000313|EMBL:KGK99989.1}; TaxID=1225651 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thalassobacter.;" source="Thalassobacter sp. 16PALIMAR09.;"
zinc-binding dehydrogenase rbh
Displaying items 1-30 of 103 in total

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