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S9_scaffold_370_curated

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S9_scaffold_370_curated_1
R_Sphingopyxis_65_20, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

155..517
DNA (363bp) protein (121aa)
P-type conjugative transfer protein TrbL n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QEZ3_BREDI
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_20_curated
S9_scaffold_370_curated_2
R_Sphingopyxis_65_20, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

519..1202
DNA (684bp) protein (228aa)
Conjugal transfer protein n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QFZ3_BREDI rbh
conjugal transfer protein TrbF
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_20_curated
S9_scaffold_370_curated_3
R_Sphingopyxis_65_20, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1181..2212
DNA (1032bp) protein (344aa)
P-type conjugative transfer protein TrbG n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QEV8_BREDI rbh
P-type conjugative transfer protein TrbG
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_20_curated
S9_scaffold_370_curated_4
R_Sphingopyxis_65_20, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2212..3384
DNA (1173bp) protein (391aa)
Bacterial conjugation TrbI-like protein n=1 Tax=Brevundimonas sp. BAL3 RepID=B4W818_9CAUL rbh
trbI; conjugal transfer protein
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_20_curated
S9_scaffold_370_curated_5
R_Sphingopyxis_65_20, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3381..3890
DNA (510bp) protein (170aa)
Conjugal transfer pilin processing protease TraF family protein n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1Q819_BREDI
conjugal transfer protein TraF
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_20_curated
S9_scaffold_370_curated_6
R_Sphingopyxis_65_20, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3884..4489
DNA (606bp) protein (202aa)
Transglycosylase SLT domain protein n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1Q8Y1_BREDI
lytic transglycosylase
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_20_curated
S9_scaffold_370_curated_7
Brevundimonas sp. EAKA, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4486..4767
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QXC5_BREDI
Uncharacterized protein {ECO:0000313|EMBL:KDP95185.1}; TaxID=1495854 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas sp. EAKA.;"
S9_scaffold_370_curated_8
unknown

Not on your lists

4760..4963
DNA (204bp) protein (68aa)

This feature has no annotations

S9_scaffold_370_curated_9
R_Sphingopyxis_65_20, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4960..5385
DNA (426bp) protein (142aa)
Transcriptional regulator, AlpA family n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1Q7Y0_BREDI
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_20_curated
S9_scaffold_370_curated_10
R_Sphingopyxis_65_20, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5638..7215
DNA (1578bp) protein (526aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI00036B15D0 rbh
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_20_curated
S9_scaffold_370_curated_11
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7737..8573
DNA (837bp) protein (279aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2X8J1_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD41517.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
ATPase
S9_scaffold_370_curated_12
Hirschia baltica, Hirschia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8570..9142
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Hirschia baltica (strain ATCC 49814 / DSM 5838 / IFAM 1418) RepID=C6XP88_HIRBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT58374.1}; TaxID=582402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hirschia.;" source="Hirschia baltica (strain ATCC 49814 / DSM 5838 / IFAM 1418).;"
S9_scaffold_370_curated_13
Sphingobium japonicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9143..12532
DNA (3390bp) protein (1130aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=452662 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium japonicum (strain NBRC 101211 / UT26S).;"
putative ATP-dependent DNA helicase (EC:3.6.1.-) rbh
Putative ATP-dependent DNA helicase n=1 Tax=Sphingobium japonicum (strain NBRC 101211 / UT26S) RepID=D4Z2N8_SPHJU rbh
S9_scaffold_370_curated_14
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12618..13334
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Caulobacter sp. AP07 RepID=J2QB94_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:EJL37367.1}; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. AP07.;"
hypothetical protein
S9_scaffold_370_curated_15
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13336..13776
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Caulobacter sp. AP07 RepID=J2HNH2_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:EJL37368.1}; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. AP07.;"
hypothetical protein
S9_scaffold_370_curated_16
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13776..15128
DNA (1353bp) protein (451aa)
Dinucleotide-utilizing enzyme possibly involved in molybdopterin or thiamin biosynthesis (Fragment) n=1 Tax=Caulobacter sp. AP07 RepID=J3AGK6_9CAUL rbh
Dinucleotide-utilizing enzyme possibly involved in molybdopterin or thiamin biosynthesis {ECO:0000313|EMBL:EJL31541.1}; Flags: Fragment;; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. AP07.;"
S9_scaffold_370_curated_17
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15216..17882
DNA (2667bp) protein (889aa)
Putative uncharacterized protein n=1 Tax=Rhizobium etli CNPAF512 RepID=F2AJT8_RHIET rbh
Uncharacterized protein {ECO:0000313|EMBL:EGE55282.1}; TaxID=993047 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli CNPAF512.;"
hypothetical protein rbh
S9_scaffold_370_curated_18
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17882..21025
DNA (3144bp) protein (1048aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=993047 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli CNPAF512.;"
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI00030F8E44 rbh
uvrD/REP helicase rbh
S9_scaffold_370_curated_19
R_Sphingopyxis_65_20, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21337..21561)
DNA (225bp) protein (75aa)
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_20_curated
S9_scaffold_370_curated_trna_1
unknown

Not on your lists

comp(21836..21907)
DNA (72bp)
transferRNA Val
S9_scaffold_370_curated_20
R_Brevundimonas_70_19, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21960..22676)
DNA (717bp) protein (239aa)
Putative phosphoglycolate phosphatase, bacterial n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1Q9A9_BREDI rbh
HAD-superfamily hydrolase
Tax=RIFCSPHIGHO2_01_FULL_Brevundimonas_70_19_curated
S9_scaffold_370_curated_21
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22743..24098
DNA (1356bp) protein (452aa)
Bifunctional protein GlmU n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1Q8R0_BREDI rbh
Bifunctional protein GlmU {ECO:0000256|HAMAP-Rule:MF_01631, ECO:0000256|SAAS:SAAS00083647}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
UDP-N-acetylglucosamine pyrophosphorylase rbh
S9_scaffold_370_curated_22
R_Brevundimonas_70_19, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24297..24980
DNA (684bp) protein (228aa)
ribose 5-phosphate isomerase (EC:5.3.1.6) rbh
ribose 5-phosphate isomerase n=1 Tax=alpha proteobacterium L41A RepID=UPI000371DF62 rbh
Tax=RIFCSPHIGHO2_01_FULL_Brevundimonas_70_19_curated
S9_scaffold_370_curated_23
R_Brevundimonas_70_19, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25126..26526
DNA (1401bp) protein (467aa)
glutathione reductase n=1 Tax=alpha proteobacterium L41A RepID=UPI00035DC249 rbh
glutathione-disulfide reductase rbh
Tax=RIFCSPHIGHO2_01_FULL_Brevundimonas_70_19_curated
S9_scaffold_370_curated_24
R_Brevundimonas_70_19, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26767..28134
DNA (1368bp) protein (456aa)
phospho-2-dehydro-3-deoxyheptonate aldolase (EC:2.5.1.54) rbh
3-deoxy-7-phosphoheptulonate synthase n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R0A0_BREDI rbh
Tax=RIFCSPHIGHO2_01_FULL_Brevundimonas_70_19_curated
S9_scaffold_370_curated_25
R_Brevundimonas_70_19, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28136..28717
DNA (582bp) protein (194aa)
prephenate dehydratase (EC:4.2.1.51)
Prephenate dehydratase n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QFH0_BREDI
Tax=RIFCSPHIGHO2_01_FULL_Brevundimonas_70_19_curated
S9_scaffold_370_curated_26
Brevundimonas nasdae, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29020..29718
DNA (699bp) protein (233aa)
Chorismate mutase domain protein n=1 Tax=Brevundimonas sp. BAL3 RepID=B4W5X7_9CAUL rbh
Chorismate mutase {ECO:0000313|EMBL:KIC54562.1}; TaxID=172043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas nasdae.;"
chorismate mutase, type II rbh
S9_scaffold_370_curated_27
R_Brevundimonas_70_19, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29726..30511)
DNA (786bp) protein (262aa)
DSBA oxidoreductase n=1 Tax=Brevundimonas subvibrioides (strain ATCC 15264 / DSM 4735 / LMG 14903 / NBRC 16000 / CB 81) RepID=D9QJE4_BRESC rbh
DSBA oxidoreductase rbh
Tax=RIFCSPHIGHO2_01_FULL_Brevundimonas_70_19_curated
S9_scaffold_370_curated_28
R_Brevundimonas_70_19, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30528..31940)
DNA (1413bp) protein (471aa)
Peptidase M48 Ste24p n=1 Tax=Brevundimonas subvibrioides (strain ATCC 15264 / DSM 4735 / LMG 14903 / NBRC 16000 / CB 81) RepID=D9QJE3_BRESC rbh
peptidase M48 Ste24p rbh
Tax=RIFCSPHIGHO2_01_FULL_Brevundimonas_70_19_curated
S9_scaffold_370_curated_29
Brevundimonas subvibrioides, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32001..34646)
DNA (2646bp) protein (882aa)
Ribonuclease E {ECO:0000256|HAMAP-Rule:MF_00970}; Short=RNase E {ECO:0000256|HAMAP-Rule:MF_00970};; EC=3.1.26.12 {ECO:0000256|HAMAP-Rule:MF_00970};; TaxID=633149 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas subvibrioides (strain ATCC 15264 / DSM 4735 / LMG 14903; / NBRC 16000 / CB 81) (Caulobacter subvibrioides).;"
Ribonuclease E n=1 Tax=Brevundimonas subvibrioides (strain ATCC 15264 / DSM 4735 / LMG 14903 / NBRC 16000 / CB 81) RepID=D9QJE2_BRESC rbh
ribonuclease, Rne/Rng family rbh
Displaying items 1-30 of 32 in total

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