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S9_scaffold_50_curated

Search features with annotation key words

Displaying items 1-30 of 275 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S9_scaffold_50_curated_1
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..199)
DNA (198bp) protein (66aa)
OmpA/MotB n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47IW0_DECAR
OmpA/MotB
OmpA/MotB {ECO:0000313|EMBL:AAZ45221.1}; Flags: Precursor;; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
S9_scaffold_50_curated_2
BJP_IG2103_Dechloromonas_63_51, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

385..2430
DNA (2046bp) protein (682aa)
Probable site-specific recombinase n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47IW1_DECAR rbh
site-specific recombinase rbh
Tax=BJP_IG2103_Dechloromonas_63_51
S9_scaffold_50_curated_3
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2430..4106
DNA (1677bp) protein (559aa)
Surface antigen (D15) n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47IW2_DECAR rbh
surface antigen (D15) rbh
Surface antigen (D15) {ECO:0000313|EMBL:AAZ45219.1}; Flags: Precursor;; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
S9_scaffold_50_curated_4
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4108..7764
DNA (3657bp) protein (1219aa)
Putative uncharacterized protein n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47IW3_DECAR rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AAZ45218.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
S9_scaffold_50_curated_5
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7715..8932)
DNA (1218bp) protein (406aa)
Sodium/proton antiporter, cpa1 family protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AII7_9PROT rbh
sodium/proton antiporter, cpa1 family protein rbh
Sodium/proton antiporter, cpa1 family protein {ECO:0000313|EMBL:BAN34334.1}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
S9_scaffold_50_curated_6
BJP_IG2103_Dechloromonas_60_92, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8929..12021)
DNA (3093bp) protein (1031aa)
Acriflavin resistance protein n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47IW5_DECAR rbh
acriflavin resistance protein rbh
Tax=BJP_IG2103_Dechloromonas_60_92
S9_scaffold_50_curated_7
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12018..13154)
DNA (1137bp) protein (379aa)
Secretion protein HlyD n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47IW6_DECAR rbh
secretion protein HlyD rbh
Secretion protein HlyD {ECO:0000313|EMBL:AAZ45215.1}; Flags: Precursor;; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
S9_scaffold_50_curated_8
BJP_IG2103_Dechloromonas_63_51, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13217..14827)
DNA (1611bp) protein (537aa)
propionate CoA-transferase (EC:2.8.3.1) rbh
Propionate CoA-transferase n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47IW7_DECAR rbh
Tax=BJP_IG2103_Dechloromonas_63_51
S9_scaffold_50_curated_9
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14853..16250)
DNA (1398bp) protein (466aa)
Conserved hypothetical transmembrane protein n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47IW8_DECAR rbh
hypothetical protein rbh
Conserved hypothetical transmembrane protein {ECO:0000313|EMBL:AAZ45213.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
S9_scaffold_50_curated_10
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16411..17808)
DNA (1398bp) protein (466aa)
Helix-turn-helix, Fis-type n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47IW9_DECAR rbh
Fis family transcriptional regulator rbh
Helix-turn-helix, Fis-type {ECO:0000313|EMBL:AAZ45212.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
S9_scaffold_50_curated_11
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17824..18408)
DNA (585bp) protein (195aa)
CBS protein n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47IX0_DECAR
CBS
CBS protein {ECO:0000313|EMBL:AAZ45211.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
S9_scaffold_50_curated_12
Candidatus Accumulibacter sp. BA-92, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18679..19194
DNA (516bp) protein (172aa)
hypothetical protein n=1 Tax=Brachymonas chironomi RepID=UPI0003641534
Uncharacterized protein {ECO:0000313|EMBL:EXI80882.1}; TaxID=1454003 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-92.;"
uncharacterized protein conserved in bacteria
S9_scaffold_50_curated_13
Geobacter lovleyi, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19201..21825)
DNA (2625bp) protein (875aa)
Multi-sensor hybrid histidine kinase n=1 Tax=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) RepID=B3E5L2_GEOLS rbh
multi-sensor hybrid histidine kinase rbh
Multi-sensor hybrid histidine kinase {ECO:0000313|EMBL:ACD94683.1}; TaxID=398767 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ).;"
S9_scaffold_50_curated_trna_4
unknown

Not on your lists

comp(22061..22133)
DNA (73bp)
transferRNA Ala
S9_scaffold_50_curated_14
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22202..23197)
DNA (996bp) protein (332aa)
Threonylcarbamoyl-AMP synthase {ECO:0000256|PIRNR:PIRNR004930}; Short=TC-AMP synthase {ECO:0000256|PIRNR:PIRNR004930};; EC=2.7.7.87 {ECO:0000256|PIRNR:PIRNR004930};; L-threonylcarbamoyladenylate synthase {ECO:0000256|PIRNR:PIRNR004930}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
Translation factor SUA5 n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47IX2_DECAR rbh
translation factor SUA5 rbh
S9_scaffold_50_curated_15
BJP_IG2103_Dechloromonas_63_51, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23197..24357)
DNA (1161bp) protein (387aa)
phosphoribosylaminoimidazole carboxylase ATPase subunit (EC:4.1.1.21) rbh
5-(Carboxyamino)imidazole ribonucleotide synthase n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47IX3_DECAR rbh
Tax=BJP_IG2103_Dechloromonas_63_51
S9_scaffold_50_curated_16
BJP_IG2103_Dechloromonas_63_51, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24354..24851)
DNA (498bp) protein (166aa)
N5-carboxyaminoimidazole ribonucleotide mutase n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47IX5_DECAR
1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase
Tax=BJP_IG2103_Dechloromonas_63_51
S9_scaffold_50_curated_17
BJP_08E140C01_Dechloromonas_61_78, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24851..25720)
DNA (870bp) protein (290aa)
methenyltetrahydrofolate cyclohydrolase (EC:3.5.4.9) rbh
Bifunctional protein FolD n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=FOLD_DECAR rbh
Tax=BJP_08E140C01_Dechloromonas_61_78
S9_scaffold_50_curated_18
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25793..26404)
DNA (612bp) protein (204aa)
indolepyruvate oxidoreductase subunit beta (EC:1.2.7.8) rbh
Pyruvate ferredoxin/flavodoxin oxidoreductase n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47IX7_DECAR rbh
Pyruvate ferredoxin/flavodoxin oxidoreductase {ECO:0000313|EMBL:AAZ45204.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
S9_scaffold_50_curated_19
BJP_IG2103_Dechloromonas_60_92, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26401..28287)
DNA (1887bp) protein (629aa)
4Fe-4S ferredoxin, iron-sulfur binding protein:Thiamine pyrophosphate enzyme, C-terminal TPP-binding protein n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47IX8_DECAR rbh
4Fe-4S ferredoxin rbh
Tax=BJP_IG2103_Dechloromonas_60_92
S9_scaffold_50_curated_20
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28567..31233
DNA (2667bp) protein (889aa)
Pyruvate dehydrogenase E1 component {ECO:0000256|PIRNR:PIRNR000156}; EC=1.2.4.1 {ECO:0000256|PIRNR:PIRNR000156};; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
Pyruvate dehydrogenase E1 component n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47IY2_DECAR rbh
aceE; pyruvate dehydrogenase subunit E1 rbh
S9_scaffold_50_curated_21
BJP_08E140C01_Dechloromonas_61_78, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31248..32870
DNA (1623bp) protein (541aa)
Dihydrolipoamide acetyltransferase n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47IY3_DECAR rbh
dihydrolipoamide acetyltransferase rbh
Tax=BJP_08E140C01_Dechloromonas_61_78
S9_scaffold_50_curated_22
BJP_IG2103_Dechloromonas_63_51, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32881..34674
DNA (1794bp) protein (598aa)
dihydrolipoamide dehydrogenase (EC:1.8.1.4) rbh
Dihydrolipoamide dehydrogenase n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47IY4_DECAR rbh
Tax=BJP_IG2103_Dechloromonas_63_51
S9_scaffold_50_curated_23
BJP_08E140C01_Dechloromonas_61_78, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34764..35255
DNA (492bp) protein (164aa)
Phenylacetic acid degradation-related protein n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47IY9_DECAR
hypothetical protein
Tax=BJP_08E140C01_Dechloromonas_61_78
S9_scaffold_50_curated_24
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35252..36361)
DNA (1110bp) protein (370aa)
Putative uncharacterized protein n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47IZ0_DECAR rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AAZ45191.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
S9_scaffold_50_curated_25
BJP_IG2103_Dechloromonas_63_51, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36420..36875)
DNA (456bp) protein (152aa)
Phosphohistidine phosphatase, SixA n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47IZ1_DECAR
phosphohistidine phosphatase, SixA
Tax=BJP_IG2103_Dechloromonas_63_51
S9_scaffold_50_curated_26
BJP_IG2103_Dechloromonas_63_51, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36946..37146)
DNA (201bp) protein (67aa)
hypothetical protein n=1 Tax=Rhodocyclus sp. UW 659-1-F08 RepID=UPI000365C38B
Tax=BJP_IG2103_Dechloromonas_63_51
S9_scaffold_50_curated_27
RLO_Rhodoferax_60_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37271..37501
DNA (231bp) protein (77aa)
hypothetical protein n=1 Tax=Uliginosibacterium gangwonense RepID=UPI00037AB793
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Rhodoferax_60_11_curated
S9_scaffold_50_curated_28
BJP_IG2103_Dechloromonas_60_92, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37541..38317)
DNA (777bp) protein (259aa)
Ribosomal RNA small subunit methyltransferase J n=1 Tax=Pseudomonas alcaligenes NBRC 14159 RepID=U3AZQ8_PSEAC rbh
hypothetical protein rbh
Tax=BJP_IG2103_Dechloromonas_60_92
S9_scaffold_50_curated_29
RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38328..38513)
DNA (186bp) protein (62aa)
Putative uncharacterized protein n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47IZ3_DECAR
hypothetical protein
Tax=RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated
Displaying items 1-30 of 275 in total

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