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S9_scaffold_38_curated

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Displaying items 1-30 of 419 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S9_scaffold_38_curated_1
BJP_08E140C01_Dechloromonas_61_78, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..285
DNA (285bp) protein (95aa)
Nitrous oxide reductase apoprotein n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47FQ7_DECAR
cytochrome c oxidase, subunit II
Tax=BJP_08E140C01_Dechloromonas_61_78
S9_scaffold_38_curated_2
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

364..672
DNA (309bp) protein (103aa)
Cytochrome c553 n=1 Tax=Thauera phenylacetica B4P RepID=N6YZ65_9RHOO
cytochrome c553
Tax=CG_Rhodocyc_01
S9_scaffold_38_curated_3

Not on your lists

705..1436
DNA (732bp) protein (244aa)
Uncharacterized protein (Fragment) n=1 Tax=uncultured bacterium RepID=K2EJW9_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EKD98779.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
cytochrome c553 rbh
S9_scaffold_38_curated_4
BJP_IG2103_Dechloromonas_63_51, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1557..2537
DNA (981bp) protein (327aa)
Putative uncharacterized protein n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47FR4_DECAR rbh
hypothetical protein rbh
Tax=BJP_IG2103_Dechloromonas_63_51
S9_scaffold_38_curated_5
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2542..3900
DNA (1359bp) protein (453aa)
Periplasmic copper-binding protein n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47FR5_DECAR rbh
periplasmic copper-binding rbh
Periplasmic copper-binding protein {ECO:0000313|EMBL:AAZ46316.1}; Flags: Precursor;; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
S9_scaffold_38_curated_6
BJP_IG2103_Dechloromonas_63_51, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3897..4757
DNA (861bp) protein (287aa)
NADH:ubiquinone oxidoreductase chain I-like protein n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QJV6_AZOSU rbh
NADH:ubiquinone oxidoreductase chain I-like protein rbh
Tax=BJP_IG2103_Dechloromonas_63_51
S9_scaffold_38_curated_7
BJP_IG2103_Dechloromonas_63_51, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4754..5719
DNA (966bp) protein (322aa)
Ferredoxin-type protein, NapH/MauN family n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QJG5_AZOSU rbh
ferredoxin-type protein, NapH/MauN family rbh
Tax=BJP_IG2103_Dechloromonas_63_51
S9_scaffold_38_curated_8
BJP_08E140C01_Dechloromonas_61_78, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5773..6624
DNA (852bp) protein (284aa)
ABC transporter related protein n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47FR8_DECAR rbh
ABC transporter related rbh
Tax=BJP_08E140C01_Dechloromonas_61_78
S9_scaffold_38_curated_9
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6626..7135
DNA (510bp) protein (170aa)
Putative uncharacterized protein n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47FR9_DECAR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ46312.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
S9_scaffold_38_curated_10
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7137..7964
DNA (828bp) protein (276aa)
Putative ABC-2 type transport system permease protein n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47FS0_DECAR rbh
ABC transporter permease rbh
Putative ABC-2 type transport system permease protein {ECO:0000313|EMBL:AAZ46311.1}; Flags: Precursor;; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
S9_scaffold_38_curated_11
Thauera linaloolentis, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7961..8467
DNA (507bp) protein (169aa)
Thioredoxin n=1 Tax=Thauera linaloolentis 47Lol = DSM 12138 RepID=N6Z4Z7_9RHOO
Thioredoxin {ECO:0000313|EMBL:ENO89652.1}; TaxID=1123367 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera linaloolentis 47Lol = DSM 12138.;"
thioredoxin
S9_scaffold_38_curated_12
Thauera phenylacetica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8507..9394
DNA (888bp) protein (296aa)
Sodium symporter n=1 Tax=Thauera phenylacetica B4P RepID=N6YNC3_9RHOO
Sodium symporter {ECO:0000313|EMBL:ENO95806.1}; TaxID=1234382 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera phenylacetica B4P.;"
sodium symporter
S9_scaffold_38_curated_13
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9489..11738
DNA (2250bp) protein (750aa)
Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RJ77_ACCPU rbh
PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase rbh
Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) {ECO:0000313|EMBL:ACV36688.1}; Flags: Precursor;; TaxID=522306 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumulibacter phosphatis (strain UW-1).;"
S9_scaffold_38_curated_14
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11759..14134
DNA (2376bp) protein (792aa)
PAS/PAC sensor hybrid histidine kinase (EC:2.7.3.-)
PAS/PAC sensor hybrid histidine kinase {ECO:0000313|EMBL:AAZ46642.1}; EC=2.7.13.3 {ECO:0000313|EMBL:AAZ46642.1};; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
PAS/PAC sensor hybrid histidine kinase n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47ET9_DECAR
S9_scaffold_38_curated_15
unknown

Not on your lists

comp(14123..14266)
DNA (144bp) protein (48aa)

This feature has no annotations

S9_scaffold_38_curated_16
BJP_08E140C01_Dechloromonas_61_78, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14308..14856)
DNA (549bp) protein (183aa)
Putative uncharacterized protein n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47J60_DECAR
hypothetical protein
Tax=BJP_08E140C01_Dechloromonas_61_78
S9_scaffold_38_curated_17
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14987..15334)
DNA (348bp) protein (116aa)
Putative uncharacterized protein n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47GZ4_DECAR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ45887.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
S9_scaffold_38_curated_18
Candidatus Accumulibacter sp. BA-92, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15476..16024
DNA (549bp) protein (183aa)
Bacterial lipocalin n=1 Tax=Acidovorax sp. CF316 RepID=J1ERH0_9BURK
Outer membrane lipoprotein blc {ECO:0000313|EMBL:EXI77481.1}; TaxID=1454003 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-92.;"
Lipocalin family protein
S9_scaffold_38_curated_19
BJP_IG2103_Dechloromonas_63_51, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16057..16908)
DNA (852bp) protein (284aa)
Alpha/beta hydrolase fold protein n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47ES1_DECAR rbh
alpha/beta hydrolase rbh
Tax=BJP_IG2103_Dechloromonas_63_51
S9_scaffold_38_curated_20
RLO_Rhodoferax_60_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17017..18471
DNA (1455bp) protein (485aa)
GGDEF domain protein id=12553061 bin=BDI tax=BDI organism_group=Betaproteobacteria rbh
GGDEF domain protein rbh
Tax=RIFCSPLOWO2_12_FULL_Rhodoferax_60_11_curated
S9_scaffold_38_curated_21
BJP_IG2103_Dechloromonas_63_51, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18754..22176)
DNA (3423bp) protein (1141aa)
SMC protein, N-terminal n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47ER6_DECAR rbh
SMC protein, N-terminal rbh
Tax=BJP_IG2103_Dechloromonas_63_51
S9_scaffold_38_curated_22
BJP_IG2103_Dechloromonas_63_51, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22173..23393)
DNA (1221bp) protein (407aa)
exonuclease SbcD (EC:3.1.11.1) rbh
Exodeoxyribonuclease I subunit D n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47ER5_DECAR rbh
Tax=BJP_IG2103_Dechloromonas_63_51
S9_scaffold_38_curated_23
BJP_08E140C01_Dechloromonas_61_78, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23513..23902
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Rheinheimera nanhaiensis E407-8 RepID=I1DU52_9GAMM
protein of unassigned function
Tax=BJP_08E140C01_Dechloromonas_61_78
S9_scaffold_38_curated_24
R_RIF_OD1_01_48_11, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

24037..24900
DNA (864bp) protein (288aa)
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_01_48_11_curated
S9_scaffold_38_curated_25
Nitratireductor basaltis, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24984..25778
DNA (795bp) protein (265aa)
Peptidoglycan-binding domain 1 n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11ME5_MESSB
Peptidoglycan-binding domain 1 protein {ECO:0000313|EMBL:KFB11217.1}; TaxID=472175 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor basaltis.;"
peptidoglycan binding domain-containing protein
S9_scaffold_38_curated_26
BJP_IG2103_Dechloromonas_63_51, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25879..26232
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RPM7_ACCPU
hypothetical protein
Tax=BJP_IG2103_Dechloromonas_63_51
S9_scaffold_38_curated_27
BJP_IG2103_Dechloromonas_63_51, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26239..27048)
DNA (810bp) protein (270aa)
Uncharacterized protein n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RRM7_ACCPU
hypothetical protein
Tax=BJP_IG2103_Dechloromonas_63_51
S9_scaffold_38_curated_28
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27098..28708)
DNA (1611bp) protein (537aa)
Methyl-accepting chemotaxis protein n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QK85_AZOSU rbh
methyl-accepting chemotaxis protein rbh
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:AEV25518.1}; Flags: Precursor;; TaxID=640081 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azospira.;" source="Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) (Dechlorosoma; suillum).;"
S9_scaffold_38_curated_29
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29022..32981
DNA (3960bp) protein (1320aa)
phosphoribosylformylglycinamidine synthase (EC:6.3.5.3) rbh
Phosphoribosylformylglycinamidine synthase {ECO:0000256|HAMAP-Rule:MF_00419, ECO:0000256|SAAS:SAAS00064474}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_00419};; Short=FGAMS {ECO:0000256|HAMAP-Rule:MF_00419};; EC=6.3.5.3 {ECO:0000256|HAMAP-Rule:MF_00419, ECO:0000256|SAAS:SAAS00064474};; Formylglycinamide ribonucleotide amidotransferase {ECO:0000256|HAMAP-Rule:MF_00419}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
Phosphoribosylformylglycinamidine synthase n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47ER0_DECAR rbh
S9_scaffold_38_curated_trna_1
unknown

Not on your lists

33045..33132
DNA (88bp)
transferRNA Ser
Displaying items 1-30 of 419 in total

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