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S9_scaffold_53_curated

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Displaying items 1-30 of 163 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S9_scaffold_53_curated_1
RBG_13_Nitrospirae_41_22_curated, Nitrospirae, Bacteria

Not on your lists

109..783
DNA (675bp) protein (225aa)
hypothetical protein n=1 Tax=Thioalkalivibrio sp. ARh3 RepID=UPI000363C053
hypothetical protein
Tax=RBG_13_Nitrospirae_41_22_curated
S9_scaffold_53_curated_trna_1
unknown

Not on your lists

comp(1012..1084)
DNA (73bp)
transferRNA Asn
S9_scaffold_53_curated_2
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1140..2075)
DNA (936bp) protein (312aa)
Ribosome biogenesis GTPase A n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47F49_DECAR rbh
GTP-binding rbh
Ribosome biogenesis GTPase A {ECO:0000256|PIRNR:PIRNR006230}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
S9_scaffold_53_curated_3
CG_Rhodof_01, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2106..3677)
DNA (1572bp) protein (524aa)
Uncharacterized protein n=1 Tax=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) RepID=Q82XA4_NITEU rbh
hypothetical protein rbh
Tax=CG_Rhodof_01
S9_scaffold_53_curated_4
BJP_IG2103_Dechloromonas_60_92, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3691..3939)
DNA (249bp) protein (83aa)
Molybdopterin synthase subunit MoaD n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47F50_DECAR
molybdopterin synthase subunit MoaD
Tax=BJP_IG2103_Dechloromonas_60_92
S9_scaffold_53_curated_5
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3936..5144)
DNA (1209bp) protein (403aa)
Molybdopterin molybdochelatase n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47F51_DECAR rbh
molybdopterin molybdochelatase rbh
Molybdopterin molybdochelatase {ECO:0000313|EMBL:AAZ46530.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
S9_scaffold_53_curated_6
BJP_IG2103_Dechloromonas_60_92, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5147..5644)
DNA (498bp) protein (166aa)
Molybdopterin guanine dinucleotide biosynthesis accessory protein MobB n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47F52_DECAR
molybdopterin-guanine dinucleotide biosynthesis MobB region
Tax=BJP_IG2103_Dechloromonas_60_92
S9_scaffold_53_curated_7
BJP_08E140C01_Dechloromonas_61_78, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5662..6795)
DNA (1134bp) protein (378aa)
Putative uncharacterized protein n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47F53_DECAR rbh
hypothetical protein rbh
Tax=BJP_08E140C01_Dechloromonas_61_78
S9_scaffold_53_curated_8
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6792..8765)
DNA (1974bp) protein (658aa)
Helicase c2:DEAD/DEAH box helicase, N-terminal n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47F55_DECAR rbh
helicase c2:DEAD/DEAH box helicase, N-terminal rbh
Helicase c2:DEAD/DEAH box helicase, N-terminal {ECO:0000313|EMBL:AAZ46526.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
S9_scaffold_53_curated_9
BJP_IG2103_Dechloromonas_63_51, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8968..9810
DNA (843bp) protein (281aa)
Fumarate reductase respiratory complex, transmembrane subunit n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47F56_DECAR rbh
fumarate reductase cytochrome b-556 subunit rbh
Tax=BJP_IG2103_Dechloromonas_63_51
S9_scaffold_53_curated_10
BJP_IG2103_Dechloromonas_63_51, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9814..11793
DNA (1980bp) protein (660aa)
fumarate reductase flavoprotein subunit (EC:1.3.5.1) rbh
Succinate dehydrogenase subunit A n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47F57_DECAR rbh
Tax=BJP_IG2103_Dechloromonas_63_51
S9_scaffold_53_curated_11
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11790..12548
DNA (759bp) protein (253aa)
frdB; fumarate reductase iron-sulfur subunit (EC:1.3.5.1) rbh
Succinate dehydrogenase subunit B {ECO:0000313|EMBL:AAZ46523.1}; EC=1.3.5.1 {ECO:0000313|EMBL:AAZ46523.1};; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
Succinate dehydrogenase subunit B n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47F58_DECAR rbh
S9_scaffold_53_curated_12
BJP_IG2103_Dechloromonas_63_51, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12601..14079
DNA (1479bp) protein (493aa)
Sulfate transporter n=1 Tax=Thauera phenylacetica B4P RepID=N6YUQ7_9RHOO rbh
sulP; sulfate transporter rbh
Tax=BJP_IG2103_Dechloromonas_63_51
S9_scaffold_53_curated_13
BJP_IG2103_Dechloromonas_63_51, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14090..14968
DNA (879bp) protein (293aa)
Universal stress protein A n=1 Tax=Pseudomonas aeruginosa VRFPA05 RepID=V4X0B3_PSEAI rbh
uspA11; universal stress protein UspA rbh
Tax=BJP_IG2103_Dechloromonas_63_51
S9_scaffold_53_curated_14
Aquabacterium sp. NJ1, Aquabacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14972..15745)
DNA (774bp) protein (258aa)
membrane protein n=1 Tax=Rhodocyclaceae bacterium RZ94 RepID=UPI00037EC258 rbh
Membrane protein {ECO:0000313|EMBL:KGM40178.1}; TaxID=1538295 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Aquabacterium.;" source="Aquabacterium sp. NJ1.;"
conserved membrane protein of unknown function
S9_scaffold_53_curated_15
Aquabacterium sp. NJ1, Aquabacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15843..16763
DNA (921bp) protein (307aa)
hypothetical protein n=1 Tax=Methyloversatilis sp. NVD RepID=UPI00035F4FDA rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:KGM40179.1}; TaxID=1538295 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Aquabacterium.;" source="Aquabacterium sp. NJ1.;"
putative DNA-binding transcriptional regulator, LysR family
S9_scaffold_53_curated_16
BJP_IG2103_Dechloromonas_63_51, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16830..18047
DNA (1218bp) protein (406aa)
Putative efflux transporter n=1 Tax=Oxalobacteraceae bacterium IMCC9480 RepID=F1VW70_9BURK rbh
RND family efflux transporter MFP subunit rbh
Tax=BJP_IG2103_Dechloromonas_63_51
S9_scaffold_53_curated_17
BJP_IG2103_Dechloromonas_63_51, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18056..19270
DNA (1215bp) protein (405aa)
Uncharacterized protein n=1 Tax=Thauera phenylacetica B4P RepID=N6ZWH1_9RHOO rbh
hypothetical protein rbh
Tax=BJP_IG2103_Dechloromonas_63_51
S9_scaffold_53_curated_18
Thauera aminoaromatica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19263..19979
DNA (717bp) protein (239aa)
Lipoprotein-releasing system ATP-binding protein LolD {ECO:0000256|HAMAP-Rule:MF_01708}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01708};; TaxID=1234381 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera aminoaromatica S2.;"
ABC transporter related n=1 Tax=Thauera sp. (strain MZ1T) RepID=C4KAK0_THASP rbh
ABC transporter rbh
S9_scaffold_53_curated_19
BJP_08E140C01_Dechloromonas_61_78, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20053..21183
DNA (1131bp) protein (377aa)
Aminotransferase, class V n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47CH9_DECAR rbh
aminotransferase class V rbh
Tax=BJP_08E140C01_Dechloromonas_61_78
S9_scaffold_53_curated_20
BJP_IG2103_Dechloromonas_63_51, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21281..21799
DNA (519bp) protein (173aa)
Probable lipoprotein signal peptide n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q478T3_DECAR
lipoprotein signal peptidase
Tax=BJP_IG2103_Dechloromonas_63_51
S9_scaffold_53_curated_21
BJP_08E140C01_Dechloromonas_61_78, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21858..22409)
DNA (552bp) protein (184aa)
Polyhydroxyalkanoate synthesis repressor PhaR n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47FM0_DECAR rbh
polyhydroxyalkanoate synthesis repressor PhaR rbh
Tax=BJP_08E140C01_Dechloromonas_61_78
S9_scaffold_53_curated_22
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22502..23245)
DNA (744bp) protein (248aa)
Acetoacetyl-CoA reductase n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47FM2_DECAR rbh
acetoacetyl-CoA reductase rbh
Acetoacetyl-CoA reductase {ECO:0000313|EMBL:AAZ46359.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
S9_scaffold_53_curated_23
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23291..24031)
DNA (741bp) protein (247aa)
3-oxoacyl-ACP reductase (EC:1.1.1.100) rbh
3-oxoacyl-[acyl-carrier-protein] reductase {ECO:0000313|EMBL:AAZ46358.1}; EC=1.1.1.100 {ECO:0000313|EMBL:AAZ46358.1};; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
3-oxoacyl-[acyl-carrier-protein] reductase n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47FM3_DECAR rbh
S9_scaffold_53_curated_24
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24059..25840)
DNA (1782bp) protein (594aa)
Poly(R)-hydroxyalkanoic acid synthase, class I n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47FM4_DECAR rbh
Poly(R)-hydroxyalkanoic acid synthase, class I rbh
Poly(R)-hydroxyalkanoic acid synthase, class I {ECO:0000313|EMBL:AAZ46357.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
S9_scaffold_53_curated_25
BJP_IG2103_Dechloromonas_63_51, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25860..26183
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QN47_AZOSU
hypothetical protein
Tax=BJP_IG2103_Dechloromonas_63_51
S9_scaffold_53_curated_26
BJP_08E140C01_Dechloromonas_61_78, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26061..26789)
DNA (729bp) protein (243aa)
Putative uncharacterized protein n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47FM7_DECAR rbh
hypothetical protein rbh
Tax=BJP_08E140C01_Dechloromonas_61_78
S9_scaffold_53_curated_27
BJP_IG2103_Dechloromonas_63_51, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26779..27738)
DNA (960bp) protein (320aa)
ribosomal large subunit pseudouridine synthase D (EC:5.4.99.-) rbh
Pseudouridine synthase n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47FM8_DECAR rbh
Tax=BJP_IG2103_Dechloromonas_63_51
S9_scaffold_53_curated_28
BJP_08E140C01_Dechloromonas_61_78, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27740..28564
DNA (825bp) protein (275aa)
Outer membrane protein assembly factor BamD n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47FM9_DECAR rbh
competence lipoprotein precursor rbh
Tax=BJP_08E140C01_Dechloromonas_61_78
S9_scaffold_53_curated_29
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28600..30984)
DNA (2385bp) protein (795aa)
Protein kinase:GAF n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47FN0_DECAR rbh
protein kinase:GAF rbh
Protein kinase:GAF {ECO:0000313|EMBL:AAZ46351.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
Displaying items 1-30 of 163 in total

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