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S9_scaffold_7_curated

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Displaying items 1-30 of 474 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S9_scaffold_7_curated_1
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(234..659)
DNA (426bp) protein (142aa)
Mll0741 protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98M42_RHILO
hypothetical protein
Mll0741 protein {ECO:0000313|EMBL:BAB48271.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
S9_scaffold_7_curated_2
Pelagibacterium halotolerans, Pelagibacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(748..1533)
DNA (786bp) protein (262aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RFJ6_PELHB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEQ52998.1}; TaxID=1082931 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Pelagibacterium.;" source="Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2).;"
S9_scaffold_7_curated_3
Pelagibacterium halotolerans, Pelagibacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1613..2383)
DNA (771bp) protein (257aa)
Acetyltransferase, GNAT family protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RFJ5_PELHB
GNAT family acetyltransferase
Acetyltransferase, GNAT family protein {ECO:0000313|EMBL:AEQ52997.1}; TaxID=1082931 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Pelagibacterium.;" source="Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2).;"
S9_scaffold_7_curated_4
Nitratireductor basaltis, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2507..3508)
DNA (1002bp) protein (334aa)
glyoxylate reductase (EC:1.1.1.26) rbh
Putative D-isomer specific 2-hydroxyacid dehydrogenases family protein Glyoxylate reductase (Glycolate reductase) n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FGX8_9RHIZ rbh
D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding protein {ECO:0000313|EMBL:KFB11320.1}; TaxID=472175 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor basaltis.;"
S9_scaffold_7_curated_5
unknown

Not on your lists

3727..4041
DNA (315bp) protein (105aa)

This feature has no annotations

S9_scaffold_7_curated_6
Nitratireductor aquibiodomus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4148..4705
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5BSD1_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EIM72483.1}; TaxID=1189611 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor aquibiodomus RA22.;"
hypothetical protein
S9_scaffold_7_curated_7
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4712..5191)
DNA (480bp) protein (160aa)
Fur family transcriptional regulator n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FKN1_9RHIZ
Fur family transcriptional regulator {ECO:0000313|EMBL:ESX77826.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
ferric-uptake regulator
S9_scaffold_7_curated_8
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5345..5860
DNA (516bp) protein (172aa)
3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase {ECO:0000256|HAMAP-Rule:MF_00405, ECO:0000256|SAAS:SAAS00064161}; EC=4.2.1.59 {ECO:0000256|HAMAP-Rule:MF_00405, ECO:0000256|SAAS:SAAS00064166};; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabA {ECO:0000256|HAMAP-Rule:MF_00405}; Beta-hydroxydecanoyl thioester dehydrase {ECO:0000256|HAMAP-Rule:MF_00405}; Trans-2-decenoyl-[acyl-carrier-protein] isomerase {ECO:0000256|HAMAP-Rule:MF_00405}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA (EC:4.2.1.60) rbh
3-hydroxydecanoyl-ACP dehydratase n=1 Tax=Hoeflea sp. 108 RepID=UPI000379C35E rbh
S9_scaffold_7_curated_9
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5918..7138
DNA (1221bp) protein (407aa)
3-oxoacyl-(Acyl carrier protein) synthase I {ECO:0000313|EMBL:EHK59016.1}; EC=2.3.1.41 {ECO:0000313|EMBL:EHK59016.1};; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
fabB; 3-oxoacyl-ACP synthase (EC:2.3.1.41) rbh
3-oxoacyl-(Acyl carrier protein) synthase I n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HJV3_9RHIZ rbh
S9_scaffold_7_curated_10
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7146..7955
DNA (810bp) protein (270aa)
Enoyl-[acyl-carrier-protein] reductase [NADH] {ECO:0000256|PIRNR:PIRNR000094}; EC=1.3.1.9 {ECO:0000256|PIRNR:PIRNR000094};; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
Enoyl-[acyl-carrier-protein] reductase [NADH] n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TLT9_MESCW rbh
short-chain dehydrogenase/reductase SDR rbh
S9_scaffold_7_curated_11
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8033..9619
DNA (1587bp) protein (529aa)
diguanylate phosphodiesterase n=1 Tax=Hoeflea sp. 108 RepID=UPI0003651874 rbh
Uncharacterized protein {ECO:0000313|EMBL:CDX16238.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
diguanylate cyclase/phosphodiesterase rbh
S9_scaffold_7_curated_12
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9625..10671)
DNA (1047bp) protein (349aa)
UPI0003CF8B19 related cluster n=1 Tax=unknown RepID=UPI0003CF8B19 rbh
Ribosomal rna small subunit methyltransferase C {ECO:0000313|EMBL:CDX50801.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
methyltransferase small rbh
S9_scaffold_7_curated_13
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10682..11218)
DNA (537bp) protein (179aa)
Isopentenyl-diphosphate Delta-isomerase {ECO:0000256|HAMAP-Rule:MF_00202, ECO:0000256|SAAS:SAAS00231155}; Short=IPP isomerase {ECO:0000256|HAMAP-Rule:MF_00202};; EC=5.3.3.2 {ECO:0000256|HAMAP-Rule:MF_00202};; IPP:DMAPP isomerase {ECO:0000256|HAMAP-Rule:MF_00202}; Isopentenyl pyrophosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00202}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium albertimagni AOL15.;"
idi2; isopentenyl-diphosphate delta-isomerase (EC:5.3.3.2)
Isopentenyl-diphosphate Delta-isomerase n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2Q6T5_9RHIZ
S9_scaffold_7_curated_14
Hoeflea phototrophica, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11236..12450)
DNA (1215bp) protein (405aa)
5-aminolevulinate synthase {ECO:0000256|RuleBase:RU910713}; EC=2.3.1.37 {ECO:0000256|RuleBase:RU910713};; 5-aminolevulinic acid synthase {ECO:0000256|RuleBase:RU910713}; Delta-ALA synthase {ECO:0000256|RuleBase:RU910713}; Delta-aminolevulinate synthase {ECO:0000256|RuleBase:RU910713}; TaxID=411684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea phototrophica DFL-43.;"
5-aminolevulinate synthase n=1 Tax=Amorphus coralli RepID=UPI00037CF78A rbh
hemA; 8-amino-7-oxononanoate synthase rbh
S9_scaffold_7_curated_15
Thioalkalivibrio thiocyanoxidans, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12681..13847
DNA (1167bp) protein (389aa)
hypothetical protein n=1 Tax=Thioalkalivibrio sp. AKL11 RepID=UPI0003667120
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF00071.1}; TaxID=713587 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio thiocyanoxidans ARh 4.;"
S9_scaffold_7_curated_16
unknown

Not on your lists

comp(13890..14678)
DNA (789bp) protein (263aa)

This feature has no annotations

S9_scaffold_7_curated_17
Mesorhizobium australicum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15040..16086
DNA (1047bp) protein (349aa)
PAS domain S-box n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KNM7_MESAW rbh
PAS domain S-box rbh
PAS domain S-box {ECO:0000313|EMBL:AGB45604.1}; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073).;"
S9_scaffold_7_curated_18
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16096..16494)
DNA (399bp) protein (133aa)
Putative ferric uptake regulator, Fur family n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11B55_MESSB
ferric uptake regulator family protein
Putative ferric uptake regulator, Fur family {ECO:0000313|EMBL:ABG65370.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
S9_scaffold_7_curated_19
Aurantimonas manganoxydans, Aurantimonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16491..17312)
DNA (822bp) protein (274aa)
Permease component, ABC-type Zn2+/Mn2+ transporter n=1 Tax=Manganese-oxidizing bacterium (strain SI85-9A1) RepID=Q1YN43_MOBAS rbh
Permease component, ABC-type Zn2+/Mn2+ transporter {ECO:0000313|EMBL:EAS51188.1}; TaxID=287752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aurantimonas.;" source="Manganese-oxidizing bacterium (strain SI85-9A1).;"
znuB; High-affinity zinc uptake system membrane protein ZnuB
S9_scaffold_7_curated_20
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17305..18159)
DNA (855bp) protein (285aa)
Zinc import ATP-binding protein ZnuC {ECO:0000256|HAMAP-Rule:MF_01725}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01725};; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium albertimagni AOL15.;"
zinc ABC transporter ATP-binding protein n=1 Tax=Rhizobium leguminosarum RepID=UPI00037DC193 rbh
znuC; high-affinity zinc uptake system ATP-binding component of ABC transporter protein rbh
S9_scaffold_7_curated_21
Hoeflea phototrophica, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18279..19391
DNA (1113bp) protein (371aa)
Zinc ABC transporter, periplasmic zinc-binding protein n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9D7A4_9RHIZ rbh
ABC-type Zn2+ transport system, periplasmic component/surface adhesin {ECO:0000313|EMBL:EDQ33039.1}; TaxID=411684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea phototrophica DFL-43.;"
zinc ABC transporter periplasmic zinc-binding protein rbh
S9_scaffold_7_curated_22
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19528..20442
DNA (915bp) protein (305aa)
Aminoglycoside phosphotransferase n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FJF1_9RHIZ rbh
Aminoglycoside phosphotransferase {ECO:0000313|EMBL:ESX75508.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
aminoglycoside phosphotransferase rbh
S9_scaffold_7_curated_23
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20487..20684
DNA (198bp) protein (66aa)
hypothetical protein n=1 Tax=Rhizobium phaseoli RepID=UPI000370EAE1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD87107.1}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
S9_scaffold_7_curated_24
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20765..20962)
DNA (198bp) protein (66aa)
CsbD-like protein n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2MH44_9RHIZ
CsbD-like protein {ECO:0000313|EMBL:EKF20035.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
CsbD-like protein
S9_scaffold_7_curated_25
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(21115..22824)
DNA (1710bp) protein (570aa)
30S ribosomal protein S1 n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2MEQ8_9RHIZ rbh
30S ribosomal protein S1 {ECO:0000256|PIRNR:PIRNR002111}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
rpsA; 30S ribosomal protein S1 rbh
S9_scaffold_7_curated_26
Ochrobactrum sp. CDB2, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23008..23667)
DNA (660bp) protein (220aa)
Cytidylate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; Short=CK {ECO:0000256|HAMAP-Rule:MF_00238};; EC=2.7.4.25 {ECO:0000256|HAMAP-Rule:MF_00238};; Cytidine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; TaxID=360313 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum sp. CDB2.;"
cmk; cytidylate kinase (EC:2.7.4.25)
Cytidylate kinase n=1 Tax=Ochrobactrum sp. CDB2 RepID=M3J9P3_9RHIZ
S9_scaffold_7_curated_27
Brucella suis, Brucella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23773..25119)
DNA (1347bp) protein (449aa)
aroA; 3-phosphoshikimate 1-carboxyvinyltransferase (EC:2.5.1.19) rbh
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531}; EC=2.5.1.19 {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531};; 5-enolpyruvylshikimate-3-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00210}; TaxID=1160233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Brucella.;" source="Brucella suis 92/29.;"
3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Hoeflea sp. 108 RepID=UPI0003634E5C rbh
S9_scaffold_7_curated_28
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25409..25789
DNA (381bp) protein (127aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HK93_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHK58813.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
TIGR02300 family protein
S9_scaffold_7_curated_trna_1
unknown

Not on your lists

25922..25994
DNA (73bp)
transferRNA Ala
S9_scaffold_7_curated_29
unknown

Not on your lists

26170..26595
DNA (426bp) protein (142aa)
hypothetical protein
Displaying items 1-30 of 474 in total

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