ggKbase home page

S9_scaffold_44_curated

Search features with annotation key words

Displaying items 1-30 of 169 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S9_scaffold_44_curated_1
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(327..2432)
DNA (2106bp) protein (702aa)
ATP-dependent DNA helicase {ECO:0000313|EMBL:CDX58357.1}; EC=3.6.1.- {ECO:0000313|EMBL:CDX58357.1};; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
UPI0003CE0DEC related cluster n=1 Tax=unknown RepID=UPI0003CE0DEC rbh
ATP-dependent DNA helicase RecG rbh
S9_scaffold_44_curated_2
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2527..2820
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2M5Y3_9RHIZ
Conserved protein {ECO:0000313|EMBL:GAK43947.1}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
hypothetical protein
S9_scaffold_44_curated_3
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2817..6314
DNA (3498bp) protein (1166aa)
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
Transcription-repair-coupling factor n=1 Tax=Nitratireductor indicus C115 RepID=K2P0K9_9RHIZ rbh
transcription-repair coupling factor rbh
S9_scaffold_44_curated_4
Mesorhizobium sp. L103C565B0, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6439..6681
DNA (243bp) protein (81aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0003126B3D
Transcriptional regulator {ECO:0000313|EMBL:ESZ49966.1}; TaxID=1287094 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L103C565B0.;"
hypothetical protein
S9_scaffold_44_curated_5
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6681..7073
DNA (393bp) protein (131aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232B00.;"
UPI0003CE1268 related cluster n=1 Tax=unknown RepID=UPI0003CE1268
Probable ribonuclease VapC 4
S9_scaffold_44_curated_6
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7095..7793)
DNA (699bp) protein (233aa)
DSBA oxidoreductase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HSR4_9RHIZ rbh
DSBA oxidoreductase {ECO:0000313|EMBL:EHK56252.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
putative dithiol-disulfide isomerase involved in polyketide biosynthesis
S9_scaffold_44_curated_7
Fulvimarina pelagi, Fulvimarina, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7814..9634)
DNA (1821bp) protein (607aa)
Probable peptide ABC transporter, substrate-binding protein n=1 Tax=Fulvimarina pelagi HTCC2506 RepID=Q0FZX9_9RHIZ rbh
Probable peptide ABC transporter, substrate-binding protein {ECO:0000313|EMBL:EAU40462.1}; TaxID=314231 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Fulvimarina.;" source="Fulvimarina pelagi HTCC2506.;"
peptide ABC transporter substrate-binding protein rbh
S9_scaffold_44_curated_8
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9771..10484
DNA (714bp) protein (238aa)
Invasion associated locus B family protein n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FPC4_9RHIZ
Invasion associated locus B family protein {ECO:0000313|EMBL:ESX82271.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
Invasion associated locus B family protein
S9_scaffold_44_curated_trna_1
unknown

Not on your lists

10646..10725
DNA (80bp)
transferRNA Thr
S9_scaffold_44_curated_9
Halomonas salina, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10759..12234
DNA (1476bp) protein (492aa)
Anion transporter n=1 Tax=Halomonas sp. PBN3 RepID=U7NN69_9GAMM rbh
Anion transporter {ECO:0000313|EMBL:KGE78071.1}; TaxID=42565 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas salina.;"
sodium: dicarboxylate cotransporter rbh
S9_scaffold_44_curated_10
unknown

Not on your lists

comp(12242..12397)
DNA (156bp) protein (52aa)

This feature has no annotations

S9_scaffold_44_curated_11
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12510..12839)
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2MI65_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EKF20410.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
hypothetical protein
S9_scaffold_44_curated_12
unknown

Not on your lists

comp(13204..13392)
DNA (189bp) protein (63aa)

This feature has no annotations

S9_scaffold_44_curated_13
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13612..14013)
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11D59_MESSB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG64666.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
S9_scaffold_44_curated_trna_6
unknown

Not on your lists

comp(14135..14206)
DNA (72bp)
transferRNA Asn
S9_scaffold_44_curated_14
Mesorhizobium sp. LSHC412B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14380..14664
DNA (285bp) protein (95aa)
UPI0003CF34DF related cluster n=1 Tax=unknown RepID=UPI0003CF34DF
Uncharacterized protein {ECO:0000313|EMBL:ESX89170.1}; TaxID=1287285 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC412B00.;"
hypothetical protein
S9_scaffold_44_curated_trna_2
unknown

Not on your lists

14756..14826
DNA (71bp)
transferRNA Cys
S9_scaffold_44_curated_15
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14866..15540
DNA (675bp) protein (225aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0003140013
Protein-L-isoaspartate(D-aspartate) O-methyltransferase {ECO:0000313|EMBL:EKF16933.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
methyltransferase small domain protein
S9_scaffold_44_curated_16
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15726..17111
DNA (1386bp) protein (462aa)
Outer membrane efflux protein BepC n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YD11_9RHIZ rbh
Outer membrane efflux protein BepC {ECO:0000313|EMBL:EHH10483.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
TolC family type I secretion outer membrane protein rbh
S9_scaffold_44_curated_17
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17306..17968
DNA (663bp) protein (221aa)
Mll1106 protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98LA9_RHILO
hypothetical protein
Mll1106 protein {ECO:0000313|EMBL:BAB48554.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
S9_scaffold_44_curated_18
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


18119..20890
DNA (2772bp) protein (924aa)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02004}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
valS; valyl-tRNA synthetase (EC:6.1.1.9) rbh
Valine--tRNA ligase n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2M7E1_9RHIZ rbh
S9_scaffold_44_curated_19
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21122..22846
DNA (1725bp) protein (575aa)
Dihydroxy-acid dehydratase {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040}; Short=DAD {ECO:0000256|HAMAP-Rule:MF_00012};; EC=4.2.1.9 {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040};; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
dihydroxy-acid dehydratase (EC:4.2.1.9) rbh
Dihydroxy-acid dehydratase n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2MIE6_9RHIZ rbh
S9_scaffold_44_curated_20
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22833..23630
DNA (798bp) protein (266aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000363B337 rbh
Sel1 domain-containing protein repeat-containing protein {ECO:0000313|EMBL:EHK54895.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
exopolysaccharide regulatory protein exoR rbh
S9_scaffold_44_curated_21
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23971..26082
DNA (2112bp) protein (704aa)
Outer membrane autotransporter barrel domain protein n=1 Tax=Rhodopseudomonas palustris (strain TIE-1) RepID=B3QJS7_RHOPT rbh
Uncharacterized protein {ECO:0000313|EMBL:KKB82830.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
outer membrane autotransporter barrel domain-containing protein rbh
S9_scaffold_44_curated_22
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26302..26574
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Methylobacterium mesophilicum SR1.6/6 RepID=M7XXU8_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CDX36260.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
S9_scaffold_44_curated_trna_5
unknown

Not on your lists

comp(26678..26751)
DNA (74bp)
transferRNA Pro
S9_scaffold_44_curated_23
Nitratireductor aquibiodomus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26826..28283)
DNA (1458bp) protein (486aa)
Trk system potassium uptake protein n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5C7F0_9RHIZ rbh
Trk system potassium uptake protein {ECO:0000256|PIRNR:PIRNR006247}; TaxID=1189611 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor aquibiodomus RA22.;"
cation transporter rbh
S9_scaffold_44_curated_24
Tistrella mobilis, Tistrella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28511..29266
DNA (756bp) protein (252aa)
Diguanylate cyclase n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TVG6_TISMK
yhcK; diguanylate cyclase
Diguanylate cyclase {ECO:0000313|EMBL:AFK56754.1}; TaxID=1110502 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Tistrella.;" source="Tistrella mobilis (strain KA081020-065).;"
S9_scaffold_44_curated_25
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29376..30581
DNA (1206bp) protein (402aa)
Major facilitator superfamily (MFS) transporter n=1 Tax=Nitratireductor indicus C115 RepID=K2N8U5_9RHIZ rbh
Major facilitator superfamily (MFS) transporter {ECO:0000313|EMBL:EKF43923.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
Major facilitator superfamily (MFS) transporter rbh
S9_scaffold_44_curated_26
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30585..31565)
DNA (981bp) protein (327aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HVU5_9RHIZ rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EHK55099.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
hypothetical protein rbh
Displaying items 1-30 of 169 in total

View Taxonomy