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S9_scaffold_496_curated

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Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S9_scaffold_496_curated_1
Rhizobium sp. R2-400B4, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..189
DNA (189bp) protein (63aa)
amidohydrolase n=1 Tax=Pannonibacter phragmitetus RepID=UPI00036973A5
Amidohydrolase {ECO:0000313|EMBL:KEQ10435.1}; TaxID=1509404 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. R2-400B4.;"
amidohydrolase
S9_scaffold_496_curated_2
Rhizobium sp. R2-400B4, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

274..1395
DNA (1122bp) protein (374aa)
TRAP-T family transporter, DctP (Periplasmic binding) subunit n=1 Tax=Rhizobium sp. RepID=L0NII5_RHISP rbh
C4-dicarboxylate ABC transporter substrate-binding protein {ECO:0000313|EMBL:KEQ10434.1}; TaxID=1509404 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. R2-400B4.;"
TRAP C4-dicarboxylate transporter subunit DctP rbh
S9_scaffold_496_curated_3
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

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1452..1970
DNA (519bp) protein (173aa)
TRAP transporter, DctQ-like membrane protein n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J6B4_POLGS
TRAP transporter DctQ-like membrane protein
TRAP transporter, DctQ-like membrane protein {ECO:0000313|EMBL:ADZ71287.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
S9_scaffold_496_curated_4
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

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1967..3271
DNA (1305bp) protein (435aa)
TRAP-T family transporter, DctM (12 TMs) subunit n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J6B3_POLGS rbh
TRAP C4-dicarboxylate transporter permease DctM rbh
TRAP-T family transporter, DctM (12 TMs) subunit {ECO:0000313|EMBL:ADZ71288.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
S9_scaffold_496_curated_5
Halomonas sp. BC04, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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3414..3776
DNA (363bp) protein (121aa)
hypothetical protein n=1 Tax=Halomonas sp. KM-1 RepID=UPI0002881461
Uncharacterized protein {ECO:0000313|EMBL:EWG99711.1}; TaxID=1403540 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas sp. BC04.;"
hypothetical protein
S9_scaffold_496_curated_6
Halomonas anticariensis, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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3783..4172
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Halomonas anticariensis FP35 = DSM 16096 RepID=S2L2W9_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EPC02074.1}; TaxID=1121939 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas anticariensis FP35 = DSM 16096.;"
cytochrome C
S9_scaffold_496_curated_7
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4571..5497
DNA (927bp) protein (309aa)
UPI0003D011B4 related cluster n=1 Tax=unknown RepID=UPI0003D011B4 rbh
Coenzyme PQQ synthesis protein B {ECO:0000256|HAMAP-Rule:MF_00653, ECO:0000256|SAAS:SAAS00055095}; Pyrroloquinoline quinone biosynthesis protein B {ECO:0000256|HAMAP-Rule:MF_00653}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
coenzyme PQQ biosynthesis protein B rbh
S9_scaffold_496_curated_8
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5494..6249
DNA (756bp) protein (252aa)
Pyrroloquinoline-quinone synthase {ECO:0000256|HAMAP-Rule:MF_00654}; EC=1.3.3.11 {ECO:0000256|HAMAP-Rule:MF_00654};; Coenzyme PQQ synthesis protein C {ECO:0000256|HAMAP-Rule:MF_00654}; Pyrroloquinoline quinone biosynthesis protein C {ECO:0000256|HAMAP-Rule:MF_00654}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
pyrroloquinoline quinone biosynthesis protein PqqC n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002DEFE14 rbh
coenzyme PQQ biosynthesis protein C rbh
S9_scaffold_496_curated_9
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6249..6548
DNA (300bp) protein (100aa)
UPI0003CF6636 related cluster n=1 Tax=unknown RepID=UPI0003CF6636
Coenzyme PQQ synthesis protein D {ECO:0000313|EMBL:CDX30177.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
coenzyme PQQ biosynthesis protein PqqD
S9_scaffold_496_curated_10
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6545..7687
DNA (1143bp) protein (381aa)
Coenzyme PQQ synthesis protein E n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HRF2_9RHIZ rbh
Coenzyme PQQ synthesis protein E {ECO:0000256|HAMAP-Rule:MF_00660}; Pyrroloquinoline quinone biosynthesis protein E {ECO:0000256|HAMAP-Rule:MF_00660}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
coenzyme PQQ biosynthesis protein E rbh
S9_scaffold_496_curated_11
Halomonas anticariensis, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7693..8502)
DNA (810bp) protein (270aa)
Multidrug ABC transporter permease n=1 Tax=Halomonas anticariensis FP35 = DSM 16096 RepID=S2KJE1_9GAMM rbh
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=1121939 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas anticariensis FP35 = DSM 16096.;"
putative ABC transporter (permease protein) rbh
S9_scaffold_496_curated_12
Halomonas sp. BC04, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8499..9284)
DNA (786bp) protein (262aa)
hypothetical protein n=1 Tax=Halomonas sp. BJGMM-B45 RepID=UPI0003AEDCF1
2-phenylethanol ABC transporter ATP-binding protein {ECO:0000313|EMBL:EWG99707.1}; TaxID=1403540 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas sp. BC04.;"
ABC transporter ATP-binding protein
S9_scaffold_496_curated_13
Halomonas sp. BC04, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9281..10255)
DNA (975bp) protein (325aa)
membrane protein n=1 Tax=Halomonas sp. KM-1 RepID=UPI000287FB3E rbh
Membrane protein {ECO:0000313|EMBL:EWG99706.1}; TaxID=1403540 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas sp. BC04.;"
40-residue YVTN family beta-propeller repeat-containing protein rbh
S9_scaffold_496_curated_14
Halomonas huangheensis, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10276..11490)
DNA (1215bp) protein (405aa)
hypothetical protein n=1 Tax=Halomonas sp. BJGMM-B45 RepID=UPI0003AE8D4C rbh
Uncharacterized protein {ECO:0000313|EMBL:ERL49832.1}; TaxID=1178482 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas huangheensis.;"
hypothetical protein rbh
S9_scaffold_496_curated_15
Methyloceanibacter caenitepidi, Methyloceanibacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11487..11924)
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BNR6_NEPCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAQ17709.1}; TaxID=1384459 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methyloceanibacter.;" source="Methyloceanibacter caenitepidi.;"
S9_scaffold_496_curated_16
Halomonas anticariensis, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11957..12604)
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Halomonas anticariensis FP35 = DSM 16096 RepID=S2L2X2_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EPC02079.1}; TaxID=1121939 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas anticariensis FP35 = DSM 16096.;"
hypothetical protein
S9_scaffold_496_curated_17
Halomonas anticariensis, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12601..13461)
DNA (861bp) protein (287aa)
hypothetical protein n=1 Tax=Halomonas sp. KM-1 RepID=UPI000287B1BD rbh
Uncharacterized protein {ECO:0000313|EMBL:EPC02080.1}; TaxID=1121939 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas anticariensis FP35 = DSM 16096.;"
hypothetical protein
S9_scaffold_496_curated_18
Halomonas anticariensis, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13499..13966)
DNA (468bp) protein (156aa)
putative cytochrome c protein n=1 Tax=Halomonas sp. KM-1 RepID=UPI0002884EEA
Uncharacterized protein {ECO:0000313|EMBL:EPC02081.1}; TaxID=1121939 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas anticariensis FP35 = DSM 16096.;"
hypothetical protein
S9_scaffold_496_curated_19
Halomonas anticariensis, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14121..15941)
DNA (1821bp) protein (607aa)
methanol dehydrogenase n=1 Tax=Halomonas sp. KM-1 RepID=UPI000289403B rbh
Methanol dehydrogenase {ECO:0000313|EMBL:EPC02082.1}; TaxID=1121939 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas anticariensis FP35 = DSM 16096.;"
moxF2; Methanol PQQ-dependent dehydrogenase, large (alpha) subunit rbh
S9_scaffold_496_curated_20
Hyphomicrobium sp. MC1, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16344..17024
DNA (681bp) protein (227aa)
Glycerol metabolism activator n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JB55_HYPSM
agmR; glycerol metabolism activator
Glycerol metabolism activator {ECO:0000313|EMBL:CCB67578.1}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
S9_scaffold_496_curated_21
Magnetospirillum sp. SO-1, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(16967..19291)
DNA (2325bp) protein (775aa)
signal transduction histidine kinase (EC:2.7.3.-) rbh
hypothetical protein n=1 Tax=Meganema perideroedes RepID=UPI00037B8327 rbh
Signal transduction histidine kinase {ECO:0000313|EMBL:EME69501.1}; TaxID=1244869 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum sp. SO-1.;"
S9_scaffold_496_curated_22
Methyloceanibacter caenitepidi, Methyloceanibacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19288..20457)
DNA (1170bp) protein (390aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QL97_9BRAD
GfdT protein
GfdT protein {ECO:0000313|EMBL:BAQ16277.1}; TaxID=1384459 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methyloceanibacter.;" source="Methyloceanibacter caenitepidi.;"
S9_scaffold_496_curated_23
Pseudomonas resinovorans, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21027..21464
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Pseudomonas resinovorans NBRC 106553 RepID=S6AIS3_PSERE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAN48330.1}; TaxID=1245471 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas resinovorans NBRC 106553.;"
S9_scaffold_496_curated_24
Lutibaculum baratangense, Lutibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21655..22638
DNA (984bp) protein (328aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002DF9C86 rbh
ABC transporter substrate-binding protein {ECO:0000313|EMBL:ESR25806.1}; TaxID=631454 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Lutibaculum.;" source="Lutibaculum baratangense AMV1.;"
ABC transporter substrate-binding protein rbh
S9_scaffold_496_curated_25
Lutibaculum baratangense, Lutibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22646..23404
DNA (759bp) protein (253aa)
Putative ABC transporter protein n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4R1E6_9RHIZ rbh
Putative ABC transporter protein {ECO:0000313|EMBL:ESR25807.1}; TaxID=631454 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Lutibaculum.;" source="Lutibaculum baratangense AMV1.;"
binding-protein-dependent transport system inner membrane protein rbh
S9_scaffold_496_curated_26

Not on your lists

23364..24113
DNA (750bp) protein (250aa)
Putative ABC transporter n=1 Tax=Manganese-oxidizing bacterium (strain SI85-9A1) RepID=Q1YEF3_MOBAS
Uncharacterized protein {ECO:0000313|EMBL:KKN96261.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
ABC transporter
S9_scaffold_496_curated_27
Paracoccus sphaerophysae, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24123..24215)
DNA (93bp) protein (31aa)
S-(hydroxymethyl)glutathione dehydrogenase {ECO:0000256|RuleBase:RU362016}; EC=1.1.1.284 {ECO:0000256|RuleBase:RU362016};; TaxID=690417 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sphaerophysae.;"
S-(hydroxymethyl)glutathione dehydrogenase (EC:1.1.1.284)
Alcohol dehydrogenase n=2 Tax=Labrenzia RepID=U7GI02_9RHOB
Displaying 27 items

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