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S9_scaffold_228_curated

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Displaying items 1-30 of 83 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S9_scaffold_228_curated_1

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2..862
DNA (861bp) protein (287aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=L7Y6J9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:AGD93232.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
S9_scaffold_228_curated_2
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1141..1698)
DNA (558bp) protein (186aa)
Transcriptional regulator, LuxR family/sensory box protein n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3V9N6_9RHOB
Transcriptional regulator, LuxR family/sensory box protein {ECO:0000313|EMBL:EAQ14627.1}; TaxID=314271 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Maritimibacter.;" source="Maritimibacter alkaliphilus HTCC2654.;"
LuxR family transcriptional regulator
S9_scaffold_228_curated_3
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1944..3149
DNA (1206bp) protein (402aa)
ABC transporter permease n=1 Tax=Oceanicola sp. S124 RepID=UPI0002557982 rbh
Branched-chain amino acid ABC transporter, periplasmic branched-chain amino acid-binding protein {ECO:0000313|EMBL:EAQ14628.1}; TaxID=314271 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Maritimibacter.;" source="Maritimibacter alkaliphilus HTCC2654.;"
extracellular ligand-binding receptor rbh
S9_scaffold_228_curated_4
Oceanibulbus indolifex, Oceanibulbus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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3292..4092
DNA (801bp) protein (267aa)
ABC transporter related protein n=1 Tax=Oceanibulbus indolifex HEL-45 RepID=A9DUE5_9RHOB rbh
ABC transporter related protein {ECO:0000313|EMBL:EDQ06846.1}; TaxID=391624 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanibulbus.;" source="Oceanibulbus indolifex HEL-45.;"
ABC transporter ATPase rbh
S9_scaffold_228_curated_5
Sulfitobacter mediterraneus, Sulfitobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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4092..4811
DNA (720bp) protein (240aa)
ABC transporter related protein n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3V9N9_9RHOB rbh
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KAJ02526.1}; TaxID=83219 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sulfitobacter.;" source="Sulfitobacter mediterraneus.;"
ABC transporter rbh
S9_scaffold_228_curated_6
Sulfitobacter mediterraneus, Sulfitobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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4822..5817
DNA (996bp) protein (332aa)
ABC transporter permease n=1 Tax=Oceanicola sp. S124 RepID=UPI0002557985 rbh
ABC transporter permease {ECO:0000313|EMBL:KAJ02525.1}; TaxID=83219 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sulfitobacter.;" source="Sulfitobacter mediterraneus.;"
livH; High-affinity branched-chain amino acid transport system permease protein LivH (LIV-I protein H) rbh
S9_scaffold_228_curated_7
Oceanibulbus indolifex, Oceanibulbus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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5829..6926
DNA (1098bp) protein (366aa)
Branched-chain amino acid ABC transporter, permease protein n=1 Tax=Oceanibulbus indolifex HEL-45 RepID=A9DUD9_9RHOB rbh
Branched-chain amino acid ABC transporter, permease protein {ECO:0000313|EMBL:EDQ06843.1}; TaxID=391624 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanibulbus.;" source="Oceanibulbus indolifex HEL-45.;"
putative amino acid or sugar ABC transport system, permease protein rbh
S9_scaffold_228_curated_8
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6923..7762
DNA (840bp) protein (280aa)
Hydrolase n=2 Tax=Alcaligenes xylosoxydans xylosoxydans RepID=E5UFU7_ALCXX rbh
putative hydrolase rbh
D-(-)-3-hydroxybutyrate oligomer hydrolase {ECO:0000313|EMBL:AHC50451.1}; TaxID=1216976 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter xylosoxidans NBRC 15126 = ATCC 27061.;"
S9_scaffold_228_curated_9
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7765..8214)
DNA (450bp) protein (150aa)
Protein required for attachment to host cells-like protein n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2MBI3_9RHIZ
Protein required for attachment to host cells-like protein {ECO:0000313|EMBL:EKF19511.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
protein required for attachment to host cells-like
S9_scaffold_228_curated_10
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8430..9860
DNA (1431bp) protein (477aa)
UPI0003D0462E related cluster n=1 Tax=unknown RepID=UPI0003D0462E rbh
Siroheme synthase {ECO:0000313|EMBL:ESZ24450.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
siroheme synthase rbh
S9_scaffold_228_curated_11
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9875..10183
DNA (309bp) protein (103aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002D9139D
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EHK59306.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
S9_scaffold_228_curated_12
Nitratireductor basaltis, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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10206..11876
DNA (1671bp) protein (557aa)
Sulfite reductase (NADPH) protein n=1 Tax=Rhizobium grahamii CCGE 502 RepID=S3HII3_9RHIZ rbh
Nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin-like protein {ECO:0000313|EMBL:KFB08405.1}; TaxID=472175 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor basaltis.;"
nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin-like protein rbh
S9_scaffold_228_curated_13
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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11851..12597
DNA (747bp) protein (249aa)
Phosphoadenylyl-sulfate reductase (thioredoxin) {ECO:0000256|SAAS:SAAS00089161}; EC=1.8.4.8 {ECO:0000256|SAAS:SAAS00089161};; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
Phosphoadenosine phosphosulfate reductase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HJ09_9RHIZ rbh
phosphoadenosine phosphosulfate reductase rbh
S9_scaffold_228_curated_14
Mesorhizobium sp. LNJC399B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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12594..13112
DNA (519bp) protein (173aa)
Uncharacterized protein n=2 Tax=Mesorhizobium RepID=V7H670_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ESY07904.1}; TaxID=1287277 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC399B00.;"
hypothetical protein
S9_scaffold_228_curated_15
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(13117..13602)
DNA (486bp) protein (162aa)
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594};; Prolipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161}; Signal peptidase II {ECO:0000256|HAMAP-Rule:MF_00161}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
lspA; Lipoprotein signal peptidase (EC:3.4.23.36)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00036CA3F7
S9_scaffold_228_curated_16
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(13599..14462)
DNA (864bp) protein (288aa)
tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11C30_MESSB rbh
tRNA/rRNA methyltransferase SpoU rbh
tRNA/rRNA methyltransferase (SpoU) {ECO:0000313|EMBL:ABG65045.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
S9_scaffold_228_curated_17
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(14459..15499)
DNA (1041bp) protein (347aa)
Uncharacterized protein n=1 Tax=Nitratireductor indicus C115 RepID=K2P2T5_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:EKF44414.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
hypothetical protein rbh
S9_scaffold_228_curated_18
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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15649..16290
DNA (642bp) protein (214aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00035E0A69 rbh
methyltransferase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
S9_scaffold_228_curated_19
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(16300..17265)
DNA (966bp) protein (322aa)
Ornithine cyclodeaminase {ECO:0000313|EMBL:ESW89888.1}; EC=4.3.1.12 {ECO:0000313|EMBL:ESW89888.1};; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
Ornithine cyclodeaminase (EC:4.3.1.12) rbh
UPI0003CEF19A related cluster n=1 Tax=unknown RepID=UPI0003CEF19A rbh
S9_scaffold_228_curated_20
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(17318..17626)
DNA (309bp) protein (103aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HIY9_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHK59284.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
hypothetical protein
S9_scaffold_228_curated_21
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(17649..17942)
DNA (294bp) protein (98aa)
Integration host factor subunit beta n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=IHFB_MESSB
integration host factor subunit beta
Integration host factor subunit beta {ECO:0000255|HAMAP-Rule:MF_00381}; Short=IHF-beta {ECO:0000255|HAMAP-Rule:MF_00381};; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
S9_scaffold_228_curated_22
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(18005..18973)
DNA (969bp) protein (323aa)
Signal peptide peptidase A. Serine peptidase. MEROPS family S49 n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11C36_MESSB rbh
signal peptide peptidase SppA rbh
Signal peptide peptidase A. Serine peptidase. MEROPS family S49 {ECO:0000313|EMBL:ABG65039.1}; Flags: Precursor;; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
S9_scaffold_228_curated_23
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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19246..19974
DNA (729bp) protein (243aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HIY6_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHK59281.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
hypothetical protein
S9_scaffold_228_curated_24
Nitratireductor aquibiodomus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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19964..20518
DNA (555bp) protein (185aa)
OstA-like protein n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5C113_9RHIZ
OstA-like protein {ECO:0000313|EMBL:EIM75515.1}; TaxID=1189611 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor aquibiodomus RA22.;"
OstA-like protein
S9_scaffold_228_curated_25
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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20617..21330
DNA (714bp) protein (238aa)
ABC transporter n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2MRV7_9RHIZ rbh
ABC transporter {ECO:0000313|EMBL:EKF20062.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
ABC transporter rbh
S9_scaffold_228_curated_26
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(21337..21894)
DNA (558bp) protein (186aa)
Peroxiredoxin n=1 Tax=Sinorhizobium meliloti GR4 RepID=M4IPT6_RHIML
Peroxiredoxin
Uncharacterized protein {ECO:0000313|EMBL:CDH84123.1}; TaxID=1401243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti RU11/001.;"
S9_scaffold_228_curated_27
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(21921..22607)
DNA (687bp) protein (229aa)
ribulose-phosphate 3-epimerase (EC:5.1.3.1) rbh
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
UPI0003CFC8D1 related cluster n=1 Tax=unknown RepID=UPI0003CFC8D1 rbh
S9_scaffold_228_curated_28
Pelagibacterium halotolerans, Pelagibacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(22709..24550)
DNA (1842bp) protein (614aa)
ATP-dependent RNA helicase, DEAD/DEAH box family n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RED8_PELHB rbh
ATP-dependent RNA helicase, DEAD/DEAH box family rbh
ATP-dependent RNA helicase, DEAD/DEAH box family {ECO:0000313|EMBL:AEQ52883.1}; TaxID=1082931 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Pelagibacterium.;" source="Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2).;"
S9_scaffold_228_curated_29
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(24667..24933)
DNA (267bp) protein (89aa)
Formate dehydrogenase subunit delta n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2N590_9RHIZ
Formate dehydrogenase subunit delta {ECO:0000313|EMBL:EKF19383.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
fdsD; NAD-dependent formate dehydrogenase subunit delta
S9_scaffold_228_curated_30
Mesorhizobium sp. L103C120A0, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(24923..25747)
DNA (825bp) protein (275aa)
Formate dehydrogenase accessory protein FdhD n=1 Tax=Mesorhizobium sp. L103C120A0 RepID=V7HLS0_9RHIZ rbh
Protein FdhD homolog {ECO:0000256|HAMAP-Rule:MF_00187, ECO:0000256|SAAS:SAAS00093832}; TaxID=1287086 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L103C120A0.;"
formate dehydrogenase family accessory protein FdhD rbh
Displaying items 1-30 of 83 in total

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