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S9_scaffold_80_curated

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Displaying items 1-30 of 203 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S9_scaffold_80_curated_1
Nitratireductor aquibiodomus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..114
DNA (114bp) protein (38aa)
Orotate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216337}; Short=OPRT {ECO:0000256|HAMAP-Rule:MF_01208};; Short=OPRTase {ECO:0000256|HAMAP-Rule:MF_01208};; EC=2.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216337};; TaxID=1189611 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor aquibiodomus RA22.;"
Orotate phosphoribosyltransferase n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5BQB9_9RHIZ
S9_scaffold_80_curated_2
Hoeflea sp. BRH_c9, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(284..2008)
DNA (1725bp) protein (575aa)
Adenine deaminase {ECO:0000256|HAMAP-Rule:MF_01518, ECO:0000256|SAAS:SAAS00006067}; Short=Adenase {ECO:0000256|HAMAP-Rule:MF_01518};; Short=Adenine aminase {ECO:0000256|HAMAP-Rule:MF_01518};; EC=3.5.4.2 {ECO:0000256|HAMAP-Rule:MF_01518, ECO:0000256|SAAS:SAAS00006067};; TaxID=1629712 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BRH_c9.;"
Adenine deaminase n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9D2F8_9RHIZ rbh
adenine deaminase
S9_scaffold_80_curated_3
Spiribacter sp. UAH-SP71, Spiribacter, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2078..3217)
DNA (1140bp) protein (380aa)
Uncharacterized protein n=1 Tax=Spiribacter sp. UAH-SP71 RepID=U5T4P4_9GAMM rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGY91298.1}; TaxID=1335757 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Spiribacter.;" source="Spiribacter sp. UAH-SP71.;"
S9_scaffold_80_curated_4
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3225..4508)
DNA (1284bp) protein (428aa)
TRAP dicarboxylate transporter subunit DctM n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2M9Q2_9RHIZ rbh
TRAP dicarboxylate transporter subunit DctM {ECO:0000313|EMBL:EKF18871.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
TRAP dicarboxylate transporter-DctM subunit rbh
S9_scaffold_80_curated_5
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4511..5023)
DNA (513bp) protein (171aa)
Tripartite ATP-independent periplasmic transporter DctQ n=1 Tax=Nitratireductor indicus C115 RepID=K2NMR4_9RHIZ
Tripartite ATP-independent periplasmic transporter DctQ {ECO:0000313|EMBL:EKF40725.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
tripartite ATP-independent periplasmic transporter, DctQ component
S9_scaffold_80_curated_6
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5095..6093)
DNA (999bp) protein (333aa)
TRAP dicarboxylate transporter, DctP subunit n=1 Tax=Nitratireductor indicus C115 RepID=K2P091_9RHIZ rbh
TRAP dicarboxylate transporter, DctP subunit {ECO:0000313|EMBL:EKF40726.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
TRAP dicarboxylate transporter, DctP subunit rbh
S9_scaffold_80_curated_7
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6285..6896
DNA (612bp) protein (204aa)
Pyridoxamine 5'-phosphate oxidase-like FMN-binding protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HW09_9RHIZ rbh
Pyridoxamine 5'-phosphate oxidase-like FMN-binding protein {ECO:0000313|EMBL:EHK55087.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
pyridoxamine 5'-phosphate oxidase-like FMN-binding protein
S9_scaffold_80_curated_8
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7084..9570)
DNA (2487bp) protein (829aa)
ATPase n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002FAD3CD rbh
Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:ABE39540.1}; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB5).;"
heavy metal translocating P-type ATPase rbh
S9_scaffold_80_curated_9
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9708..10103
DNA (396bp) protein (132aa)
Transcriptional regulator n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FBH4_9RHIZ
Transcriptional regulator {ECO:0000313|EMBL:ESX65726.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
MerR family transcriptional regulator
S9_scaffold_80_curated_10
bacterium YEK0313, Bacteria

Not on your lists

comp(10193..10501)
DNA (309bp) protein (103aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
Ribonuclease VapC n=1 Tax=Sphingobium baderi LL03 RepID=T0HXD5_9SPHN
hypothetical protein
S9_scaffold_80_curated_11
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10828..12576)
DNA (1749bp) protein (583aa)
Putative phosphohydrolase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YKY8_9RHIZ rbh
Putative Metallophosphoesterase {ECO:0000313|EMBL:KFC70077.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Metallophosphoesterase rbh
S9_scaffold_80_curated_12
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12610..13356)
DNA (747bp) protein (249aa)
ABC-type cobalt transport system, permease component CbiQ n=1 Tax=Microvirga sp. WSM3557 RepID=I4YV77_9RHIZ rbh
ABC-type cobalt transport system, permease component CbiQ {ECO:0000313|EMBL:EIM27869.1}; Flags: Precursor;; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
cobalt transport protein
S9_scaffold_80_curated_13
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13350..15002)
DNA (1653bp) protein (551aa)
ATPase component of various ABC-type transport systems with duplicated ATPase domain n=1 Tax=Microvirga sp. WSM3557 RepID=I4YV76_9RHIZ rbh
ATPase component of various ABC-type transport systems with duplicated ATPase domain {ECO:0000313|EMBL:EIM27868.1}; Flags: Precursor;; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
ABC transporter ATP-binding protein rbh
S9_scaffold_80_curated_14
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14995..15579)
DNA (585bp) protein (195aa)
Putative membrane protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YV75_9RHIZ
Putative membrane protein {ECO:0000313|EMBL:EIM27867.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
substrate-specific component YkoE of thiamin-regulated ECF transporter for hydroxymethylpyrimidine
S9_scaffold_80_curated_15
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15640..16251)
DNA (612bp) protein (204aa)
YKOF-like protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YV74_9RHIZ rbh
YKOF-like protein {ECO:0000313|EMBL:EIM27866.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
YKOF-like protein
S9_scaffold_80_curated_16
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16571..17611
DNA (1041bp) protein (347aa)
C4-dicarboxylate ABC transporter n=2 Tax=Labrenzia RepID=U7FMK1_9RHOB
TRAP dicarboxylate transporter-DctP subunit
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
S9_scaffold_80_curated_17
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17618..18124
DNA (507bp) protein (169aa)
Tripartite ATP-independent periplasmic n=1 Tax=Roseibium sp. TrichSKD4 RepID=E2CBQ3_9RHOB
C4-dicarboxylate ABC transporter substrate-binding protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
S9_scaffold_80_curated_18
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18121..19428
DNA (1308bp) protein (436aa)
TRAP dicarboxylate transporter subunit DctM n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2N9R5_9RHIZ rbh
TRAP C4-dicarboxylate transport system permease DctM rbh
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
S9_scaffold_80_curated_19
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19435..20649)
DNA (1215bp) protein (405aa)
Putative LysR family transcriptional regulator n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J6A0_POLGS rbh
LysR family transcriptional regulator rbh
Putative LysR family transcriptional regulator {ECO:0000313|EMBL:ADZ71274.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
S9_scaffold_80_curated_20
Rhizobium sp., Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20782..22194)
DNA (1413bp) protein (471aa)
gcvT1; aminomethyltransferase GcvT (EC:2.1.2.10)
Glycine cleavage system T protein, aminomethyltransferase n=1 Tax=Rhizobium sp. RepID=L0NF71_RHISP rbh
Glycine cleavage system T protein, aminomethyltransferase {ECO:0000313|EMBL:CCF19728.1}; TaxID=391 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp.;"
S9_scaffold_80_curated_21
Magnetospirillum magnetotacticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22543..23730
DNA (1188bp) protein (396aa)
Permease of the major facilitator superfamily n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2W2Y7_MAGSA
Putative MFS transporter {ECO:0000313|EMBL:KIL98436.1}; TaxID=272627 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum magnetotacticum MS-1.;"
major facilitator superfamily permease
S9_scaffold_80_curated_22
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23894..25360
DNA (1467bp) protein (489aa)
NAD-dependent aldehyde dehydrogenase n=1 Tax=Rhizobium sp. CF080 RepID=J2J933_9RHIZ rbh
NAD-dependent aldehyde dehydrogenase
NAD-dependent aldehyde dehydrogenase {ECO:0000313|EMBL:CDN48431.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
S9_scaffold_80_curated_23
Ruegeria lacuscaerulensis, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25664..26566)
DNA (903bp) protein (301aa)
methylenetetrahydrofolate reductase n=1 Tax=Oceanicola sp. S124 RepID=UPI00025579D1 rbh
Methylenetetrahydrofolate reductase {ECO:0000313|EMBL:EEX10850.1}; TaxID=644107 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Silicibacter lacuscaerulensis ITI-1157.;"
hypothetical protein rbh
S9_scaffold_80_curated_24
Rhizobium sp. PDO1-076, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26821..27216
DNA (396bp) protein (132aa)
Endoribonuclease L-PSP n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4FCC3_9RHIZ
Endoribonuclease L-PSP {ECO:0000313|EMBL:EHS49512.1}; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. PDO1-076.;"
endoribonuclease L-PSP protein
S9_scaffold_80_curated_25
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27223..27804)
DNA (582bp) protein (194aa)
NAD(P)H dehydrogenase n=1 Tax=Rhizobium freirei PRF 81 RepID=N6U5J3_9RHIZ
NAD(P)H dehydrogenase {ECO:0000313|EMBL:ENN85533.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
NAD(P)H dehydrogenase protein
S9_scaffold_80_curated_26
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27804..29213)
DNA (1410bp) protein (470aa)
FAD-linked oxidase n=1 Tax=Rhizobium leguminosarum RepID=UPI0003749AA6 rbh
FAD-linked oxidase
FAD/FMN-dependent dehydrogenase {ECO:0000313|EMBL:EJC64199.1}; TaxID=755176 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. viciae WSM1455.;"
S9_scaffold_80_curated_27
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29210..30526)
DNA (1317bp) protein (439aa)
codAch2; cytosine deaminase-like protein (EC:3.5.4.1) rbh
Cytosine deaminase-like metal-dependent hydrolase n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2012 RepID=J0KE46_RHILT rbh
Cytosine deaminase-like metal-dependent hydrolase {ECO:0000313|EMBL:EJC75384.1}; Flags: Precursor;; TaxID=754522 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM2012.;"
S9_scaffold_80_curated_28
Rhizobium sp. CCGE 510, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30538..31419)
DNA (882bp) protein (294aa)
ABC transporter ATP-binding protein n=1 Tax=Rhizobium leguminosarum RepID=UPI0003799B24 rbh
Binding-protein-dependent transport system inner membrane protein {ECO:0000313|EMBL:EJT05849.1}; TaxID=1132836 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CCGE 510.;"
binding-protein-dependent transport system inner membrane protein rbh
S9_scaffold_80_curated_29
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31412..32260)
DNA (849bp) protein (283aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component n=1 Tax=Rhizobium sp. CF080 RepID=J3C8I0_9RHIZ rbh
Nitrate ABC transporter ATPase {ECO:0000313|EMBL:KKB78404.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component
S9_scaffold_80_curated_30
Labrenzia sp. C1B10, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32348..33373)
DNA (1026bp) protein (342aa)
Nitrate ABC transporter substrate-binding protein n=2 Tax=Labrenzia RepID=U7GGY1_9RHOB rbh
Nitrate ABC transporter substrate-binding protein {ECO:0000313|EMBL:ERP97455.1}; TaxID=1397530 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenzia sp. C1B10.;"
sulfonate/nitrate/taurine transport system substrate-binding protein
Displaying items 1-30 of 203 in total

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