ggKbase home page

S9_scaffold_54_curated

Search features with annotation key words

Displaying items 1-30 of 167 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S9_scaffold_54_curated_1
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

240..1421
DNA (1182bp) protein (394aa)
Major facilitator transporter n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HVU4_9RHIZ rbh
Major facilitator transporter {ECO:0000313|EMBL:EHK55098.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
putative MFS-type transporter rbh
S9_scaffold_54_curated_2
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1508..2005
DNA (498bp) protein (166aa)
Xanthine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01903, ECO:0000256|SAAS:SAAS00010603}; EC=2.4.2.22 {ECO:0000256|HAMAP-Rule:MF_01903, ECO:0000256|SAAS:SAAS00010679};; Xanthine-guanine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01903}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
Xanthine phosphoribosyltransferase (EC:2.4.2.22) rbh
Xanthine phosphoribosyltransferase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HRY2_9RHIZ rbh
S9_scaffold_54_curated_3
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2291..2767
DNA (477bp) protein (159aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002E420F2
NUDIX hydrolase {ECO:0000313|EMBL:CDX17709.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
NUDIX hydrolase
S9_scaffold_54_curated_4
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2997..4559
DNA (1563bp) protein (521aa)
Phosphate transporter n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HRY4_9RHIZ rbh
Phosphate transporter {ECO:0000313|EMBL:EHK56508.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
phosphate transporter rbh
S9_scaffold_54_curated_5
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5153..9049
DNA (3897bp) protein (1299aa)
Ribonucleotide-diphosphate reductase subunit alpha {ECO:0000313|EMBL:ESX82076.1}; EC=1.17.4.1 {ECO:0000313|EMBL:ESX82076.1};; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
ribonucleotide-diphosphate reductase subunit alpha (EC:1.17.4.-) rbh
Ribonucleotide-diphosphate reductase subunit alpha n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FNS5_9RHIZ rbh
S9_scaffold_54_curated_6
Mesorhizobium sp. L2C054A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9423..10139
DNA (717bp) protein (239aa)
UPI0003CFDE69 related cluster n=1 Tax=unknown RepID=UPI0003CFDE69
Uncharacterized protein {ECO:0000313|EMBL:ESZ40246.1}; TaxID=1287100 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C054A000.;"
S9_scaffold_54_curated_7
Rhizobium sp., Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10182..10877)
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. RepID=L0NCD6_RHISP rbh
Uncharacterized protein {ECO:0000313|EMBL:CCF18554.1}; TaxID=391 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp.;"
20S proteasome subunit A/B
S9_scaffold_54_curated_8
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11160..12827)
DNA (1668bp) protein (556aa)
Amidohydrolase 3 id=2576134 bin=GWF1_Rhodobacteraceae_65_7 species=Rhodobacter sp. SW2 genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good + rbh
Putative metal-dependent hydrolase rbh
Tax=GWF1_Rhodobacteraceae_65_7_curated
S9_scaffold_54_curated_9
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12999..13523
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. CF080 RepID=J3AVN0_9RHIZ
Conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDN56907.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
S9_scaffold_54_curated_10
Oceanicaulis sp. HTCC2633, Oceanicaulis, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13590..14039)
DNA (450bp) protein (150aa)
hypothetical protein n=1 Tax=Oceanicaulis alexandrii RepID=UPI0003B5E0FD
Uncharacterized protein {ECO:0000313|EMBL:EAP91629.1}; TaxID=314254 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Oceanicaulis.;" source="Oceanicaulis sp. HTCC2633.;"
YHS domain-containing protein
S9_scaffold_54_curated_11
Lyngbya confervoides, Lyngbya, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(14150..14461)
DNA (312bp) protein (104aa)
UPI0003CE4AF3 related cluster n=1 Tax=unknown RepID=UPI0003CE4AF3
Uncharacterized protein {ECO:0000313|EMBL:KIF44403.1}; TaxID=1574623 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Lyngbya.;" source="Lyngbya confervoides BDU141951.;"
Protein of unknown function (DUF2853)
S9_scaffold_54_curated_12

Not on your lists

15141..15692
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. LNJC394B00 RepID=V7G7L6_9RHIZ
Stringent starvation protein B {ECO:0000313|EMBL:AIA19250.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
S9_scaffold_54_curated_13
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15699..15899
DNA (201bp) protein (67aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HTD0_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CDX13087.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
hypothetical protein
S9_scaffold_54_curated_14
unknown

Not on your lists

15968..16198
DNA (231bp) protein (77aa)

This feature has no annotations

S9_scaffold_54_curated_15
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16542..20825)
DNA (4284bp) protein (1428aa)
UPI0003CE5E98 related cluster n=1 Tax=unknown RepID=UPI0003CE5E98 rbh
AsmA protein {ECO:0000313|EMBL:ESW86355.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
hypothetical protein rbh
S9_scaffold_54_curated_16
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20919..22346)
DNA (1428bp) protein (476aa)
FAD linked oxidase domain-containing protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HTD8_9RHIZ rbh
FAD linked oxidase domain-containing protein {ECO:0000313|EMBL:EHK55916.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
FAD/FMN-dependent dehydrogenase rbh
S9_scaffold_54_curated_17
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22475..22960
DNA (486bp) protein (162aa)
UPI0003D013CD related cluster n=1 Tax=unknown RepID=UPI0003D013CD
Thioesterase {ECO:0000313|EMBL:ESZ23496.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
hypothetical protein
S9_scaffold_54_curated_18
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23229..23405
DNA (177bp) protein (59aa)
UPI0003CFAF84 related cluster n=1 Tax=unknown RepID=UPI0003CFAF84
Uncharacterized protein {ECO:0000313|EMBL:ESZ20340.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
hypothetical protein
S9_scaffold_54_curated_19
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23433..24311)
DNA (879bp) protein (293aa)
Twin-arginine translocation pathway signal n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HTE2_9RHIZ rbh
Twin-arginine translocation pathway signal {ECO:0000313|EMBL:EHK55920.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
twin-arginine translocation pathway signal rbh
S9_scaffold_54_curated_20
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24568..25128)
DNA (561bp) protein (187aa)
Putative glyoxalase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EV13_9RHIZ
Putative glyoxalase {ECO:0000313|EMBL:EYR82244.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
glyoxalase
S9_scaffold_54_curated_21
unknown

Not on your lists

25234..25410
DNA (177bp) protein (59aa)

This feature has no annotations

S9_scaffold_54_curated_22
unknown

Not on your lists

25444..25689
DNA (246bp) protein (82aa)

This feature has no annotations

S9_scaffold_54_curated_23
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25795..28524
DNA (2730bp) protein (910aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
UvrD/REP helicase n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7YFZ1_MESOW rbh
UvrD/REP helicase rbh
S9_scaffold_54_curated_24
unknown

Not on your lists

28527..29432
DNA (906bp) protein (302aa)

This feature has no annotations

S9_scaffold_54_curated_25
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29543..30181)
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TJD9_MESCW
Transposase {ECO:0000313|EMBL:KJB92578.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
hypothetical protein
S9_scaffold_54_curated_26
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30728..31375)
DNA (648bp) protein (216aa)
Acetyltransferase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HTF5_9RHIZ rbh
Chloramphenicol acetyltransferase {ECO:0000313|EMBL:CDX13157.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
phosphonate metabolim protein, transferase hexapeptide repeat family rbh
S9_scaffold_54_curated_27
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31415..31909)
DNA (495bp) protein (165aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YGN4_9RHIZ
CreA family protein
Putative uncharacterized protein {ECO:0000313|EMBL:EHH08414.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
S9_scaffold_54_curated_28
unknown

Not on your lists

32052..32195
DNA (144bp) protein (48aa)

This feature has no annotations

S9_scaffold_54_curated_29
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32236..32817
DNA (582bp) protein (194aa)
Sco copper chaperone family protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0003121F79 rbh
Sco1p-like protein {ECO:0000313|EMBL:EHK55936.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems
S9_scaffold_54_curated_30
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32837..33964
DNA (1128bp) protein (376aa)
Pentachlorophenol 4-monooxygenase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LLR3_RHITR rbh
pentachlorophenol 4-monooxygenase rbh
Pentachlorophenol 4-monooxygenase {ECO:0000313|EMBL:AGB71631.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
Displaying items 1-30 of 167 in total

View Taxonomy