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S9_scaffold_130_curated

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Displaying items 1-30 of 118 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S9_scaffold_130_curated_1
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(182..361)
DNA (180bp) protein (60aa)
Uncharacterized protein n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8T7B8_MESCW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ESY75423.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
S9_scaffold_130_curated_2
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

586..789
DNA (204bp) protein (68aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00037EB4A2
Uncharacterized protein {ECO:0000313|EMBL:CDX34405.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
hypothetical protein
S9_scaffold_130_curated_3
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

892..1395
DNA (504bp) protein (168aa)
N5-carboxyaminoimidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338}; Short=N5-CAIR mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; EC=5.4.99.18 {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; 5-(carboxyamino)imidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
phosphoribosylaminoimidazole carboxylase catalytic subunit (EC:4.1.1.21)
UPI0003CE8922 related cluster n=1 Tax=unknown RepID=UPI0003CE8922
S9_scaffold_130_curated_4
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1392..2483
DNA (1092bp) protein (364aa)
phosphoribosylaminoimidazole carboxylase, ATPase subunit (EC:4.1.1.21) rbh
N5-carboxyaminoimidazole ribonucleotide synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200}; Short=N5-CAIR synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200};; EC=6.3.4.18 {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200};; 5-(carboxyamino)imidazole ribonucleotide synthetase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200}; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
Phosphoribosylaminoimidazole carboxylase, ATPase subunit n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7XZC7_MESOW rbh
S9_scaffold_130_curated_5

Not on your lists

2961..3965
DNA (1005bp) protein (335aa)
ABC-type thiamine transport system, periplasmic component n=1 Tax=uncultured bacterium HF130_12L15 RepID=E0XPQ9_9BACT rbh
ABC-type thiamine transport system, periplasmic component {ECO:0000313|EMBL:ADI16400.1}; TaxID=710815 species="Bacteria; environmental samples.;" source="uncultured bacterium HF130_12L15.;"
thiamine ABC transporter, periplasmic binding protein rbh
S9_scaffold_130_curated_6

Not on your lists

3978..5576
DNA (1599bp) protein (533aa)
ABC-type Fe3+ transport system, permease component n=1 Tax=uncultured bacterium HF130_12L15 RepID=E0XPQ8_9BACT rbh
ABC-type Fe3+ transport system, permease component {ECO:0000313|EMBL:ADI16399.1}; TaxID=710815 species="Bacteria; environmental samples.;" source="uncultured bacterium HF130_12L15.;"
thiP; thiamine transporter membrane protein rbh
S9_scaffold_130_curated_7
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5573..6319
DNA (747bp) protein (249aa)
Thiamine import ATP-binding protein ThiQ {ECO:0000256|HAMAP-Rule:MF_01723}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01723};; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
Thiamine ABC transporter, ATP-binding protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HLC2_9RHIZ rbh
ABC transporter ATPase rbh
S9_scaffold_130_curated_8

Not on your lists

6403..7980
DNA (1578bp) protein (526aa)
Putative Zn-dependent protease n=1 Tax=uncultured bacterium HF130_12L15 RepID=E0XPQ6_9BACT rbh
Putative Zn-dependent protease {ECO:0000313|EMBL:ADI16397.1}; TaxID=710815 species="Bacteria; environmental samples.;" source="uncultured bacterium HF130_12L15.;"
hypothetical protein rbh
S9_scaffold_130_curated_9

Not on your lists

comp(8011..8880)
DNA (870bp) protein (290aa)
RNA polymerase sigma factor n=1 Tax=uncultured bacterium HF130_12L15 RepID=E0XPQ5_9BACT rbh
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=710815 species="Bacteria; environmental samples.;" source="uncultured bacterium HF130_12L15.;"
rpoH2; RNA polymerase factor sigma-32 rbh
S9_scaffold_130_curated_10

Not on your lists

9035..10825
DNA (1791bp) protein (597aa)
Acyl-CoA dehydrogenases n=1 Tax=uncultured bacterium HF130_12L15 RepID=E0XPQ4_9BACT rbh
Acyl-CoA dehydrogenases {ECO:0000313|EMBL:ADI16395.1}; TaxID=710815 species="Bacteria; environmental samples.;" source="uncultured bacterium HF130_12L15.;"
acyl-CoA dehydrogenase rbh
S9_scaffold_130_curated_11
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10833..11588)
DNA (756bp) protein (252aa)
Enoyl-CoA hydratase (EC:4.2.1.17)
Crotonase n=1 Tax=Roseovarius sp. 217 RepID=A3W4P5_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:ETW96250.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
S9_scaffold_130_curated_12
Roseovarius mucosus, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11585..12889)
DNA (1305bp) protein (435aa)
Phenylacetate-CoA ligase {ECO:0000313|EMBL:KGM89910.1}; EC=6.2.1.30 {ECO:0000313|EMBL:KGM89910.1};; TaxID=1288298 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseovarius.;" source="Roseovarius mucosus DSM 17069.;"
Phenylacetate-coenzyme A ligase (EC:6.2.1.30)
Putative coenzyme F390 synthetase n=1 Tax=Roseovarius sp. 217 RepID=A3W4P6_9RHOB rbh
S9_scaffold_130_curated_13
Roseobacter sp. AzwK-3b, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13057..13755
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=Roseobacter sp. AzwK-3b RepID=A6FRV6_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EDM70922.1}; TaxID=351016 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Roseobacter sp. AzwK-3b.;"
S9_scaffold_130_curated_14

Not on your lists

comp(13821..14393)
DNA (573bp) protein (191aa)
Transcriptional regulators, similar to M. xanthus card n=1 Tax=uncultured bacterium HF130_12L15 RepID=E0XPQ1_9BACT rbh
Transcriptional regulators, similar to M. xanthus card {ECO:0000313|EMBL:ADI16392.1}; TaxID=710815 species="Bacteria; environmental samples.;" source="uncultured bacterium HF130_12L15.;"
CarD family transcriptional regulator rbh
S9_scaffold_130_curated_15
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14849..15187)
DNA (339bp) protein (113aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0003025A90
4Fe-4S ferredoxin {ECO:0000313|EMBL:ESY63465.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
ferredoxin II
S9_scaffold_130_curated_16
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15368..15781)
DNA (414bp) protein (138aa)
hypothetical protein n=1 Tax=Mesorhizobium sp. WSM4349 RepID=UPI00035C1C69
Uncharacterized protein {ECO:0000313|EMBL:KEC73384.1}; TaxID=1408223 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. phaseoli CCGM1.;"
Protein of hypothetical function DUF1801
S9_scaffold_130_curated_17
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15888..16136)
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. (strain NGR234) RepID=C3MG68_RHISN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACP26140.1}; TaxID=394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium sp. (strain NGR234).;"
S9_scaffold_130_curated_18
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16163..16573)
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EUU2_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR80157.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
activator of Hsp90 ATPase 1 family protein
S9_scaffold_130_curated_19
Burkholderia ambifaria, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16570..16893)
DNA (324bp) protein (108aa)
Transcriptional regulator, ArsR family n=1 Tax=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) RepID=Q0BAG6_BURCM
ArsR family transcriptional regulator
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:ABI88857.1}; TaxID=339670 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) (Burkholderia; cepacia (strain AMMD)).;"
S9_scaffold_130_curated_20

Not on your lists

comp(17000..17377)
DNA (378bp) protein (126aa)
Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) n=1 Tax=uncultured bacterium HF130_12L15 RepID=E0XPP9_9BACT
Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) {ECO:0000313|EMBL:ADI16390.1}; TaxID=710815 species="Bacteria; environmental samples.;" source="uncultured bacterium HF130_12L15.;"
RNA-binding S4 domain-containing protein
S9_scaffold_130_curated_21

Not on your lists

comp(17378..20989)
DNA (3612bp) protein (1204aa)
Superfamily II DNA and RNA helicases n=1 Tax=uncultured bacterium HF130_12L15 RepID=E0XPP8_9BACT rbh
Superfamily II DNA and RNA helicases {ECO:0000313|EMBL:ADI16389.1}; TaxID=710815 species="Bacteria; environmental samples.;" source="uncultured bacterium HF130_12L15.;"
helicase domain-containing protein rbh
S9_scaffold_130_curated_22
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21429..22118
DNA (690bp) protein (230aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000369E35F rbh
Aquaporin Z {ECO:0000256|HAMAP-Rule:MF_01146}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
apqZ; aquaporin Z rbh
S9_scaffold_130_curated_23
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22507..22830
DNA (324bp) protein (108aa)
DNA-binding protein n=1 Tax=Aquaspirillum serpens RepID=UPI0003B4DF86
DNA-binding protein
DNA-binding protein {ECO:0000313|EMBL:GAO34632.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
S9_scaffold_130_curated_24
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22862..23584)
DNA (723bp) protein (241aa)
phbB; acetoacetyl-CoA reductase (EC:1.1.1.36) rbh
Acetoacetyl-CoA reductase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HLQ7_9RHIZ rbh
Acetoacetyl-CoA reductase {ECO:0000313|EMBL:EHK58315.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
S9_scaffold_130_curated_25
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23719..24906)
DNA (1188bp) protein (396aa)
Acetyl-CoA acetyltransferase with thiolase domain (Acetoacetyl-CoA thiolase) {ECO:0000313|EMBL:CDX34010.1}; EC=2.3.1.9 {ECO:0000313|EMBL:CDX34010.1};; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
acetyl-CoA acetyltransferase (EC:2.3.1.9) rbh
Acetyl-CoA acetyltransferase n=6 Tax=Mesorhizobium RepID=V7ET96_9RHIZ rbh
S9_scaffold_130_curated_26
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25176..25787
DNA (612bp) protein (204aa)
UPI0003CFF884 related cluster n=1 Tax=unknown RepID=UPI0003CFF884 rbh
Polyhydroxyalkanoate synthesis repressor PhaR {ECO:0000313|EMBL:ESZ19588.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
polyhydroxyalkanoate synthesis repressor PhaR rbh
S9_scaffold_130_curated_27
Hoeflea sp. BRH_c9, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26275..27861)
DNA (1587bp) protein (529aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002F98F50 rbh
Gamma-glutamyltranspeptidase {ECO:0000313|EMBL:KJS09310.1}; TaxID=1629712 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BRH_c9.;"
gamma-glutamyltranspeptidase rbh
S9_scaffold_130_curated_28
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27861..28262)
DNA (402bp) protein (134aa)
Membrane protein n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FGW9_9RHIZ
Membrane protein {ECO:0000313|EMBL:ESX68779.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
hypothetical protein
S9_scaffold_130_curated_29
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28454..29125
DNA (672bp) protein (224aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YC96_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHH10661.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
cation efflux protein
S9_scaffold_130_curated_30
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29167..29859)
DNA (693bp) protein (231aa)
Two component transcriptional regulator n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YC97_9RHIZ rbh
Two component transcriptional regulator {ECO:0000313|EMBL:EHH10662.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
putative two-component response regulator
Displaying items 1-30 of 118 in total

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