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S9_scaffold_436_curated

Search features with annotation key words

Displaying items 1-30 of 58 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S9_scaffold_436_curated_1
unknown

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1..99
DNA (99bp) protein (33aa)

This feature has no annotations

S9_scaffold_436_curated_2
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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353..1450
DNA (1098bp) protein (366aa)
peptidase M24 n=1 Tax=gamma proteobacterium SCGC AB-629-P17 RepID=UPI000369AB56 rbh
Peptidase M24 {ECO:0000313|EMBL:KGM31871.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
conserved putative hydrolase/peptidase of the M24 family
S9_scaffold_436_curated_3
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1545..2474
DNA (930bp) protein (310aa)
multidrug ABC transporter ATP-binding protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI000309D87C rbh
ABC transporter-like protein {ECO:0000313|EMBL:EHK57040.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
ABC-type multidrug transport system, ATPase component rbh
S9_scaffold_436_curated_4
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2471..3232
DNA (762bp) protein (254aa)
ABC transporter n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YK60_9RHIZ rbh
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
ABC transporter rbh
S9_scaffold_436_curated_5
Phyllobacterium sp. YR531, Phyllobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3426..3731
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Phyllobacterium sp. YR531 RepID=J3HTR2_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EJN05566.1}; Flags: Precursor;; TaxID=1144343 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Phyllobacterium.;" source="Phyllobacterium sp. YR531.;"
S9_scaffold_436_curated_6
Aurantimonas manganoxydans, Aurantimonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4201..5136
DNA (936bp) protein (312aa)
Flagellin protein n=1 Tax=Manganese-oxidizing bacterium (strain SI85-9A1) RepID=Q1YLM4_MOBAS rbh
Flagellin protein {ECO:0000313|EMBL:EAS51707.1}; TaxID=287752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aurantimonas.;" source="Manganese-oxidizing bacterium (strain SI85-9A1).;"
flaC; flagellin C
S9_scaffold_436_curated_7
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5621..6790
DNA (1170bp) protein (390aa)
Extracellular ligand-binding receptor n=3 Tax=Oligotropha carboxidovorans RepID=B6JG83_OLICO rbh
extracellular ligand-binding receptor rbh
Extracellular ligand-binding receptor protein {ECO:0000313|EMBL:AEI06907.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
S9_scaffold_436_curated_8
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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6864..9278
DNA (2415bp) protein (805aa)
chemotaxis protein n=1 Tax=Rhizobium leguminosarum RepID=UPI000361946F rbh
mcpU; methyl-accepting chemotaxis protein McpU
Methyl-accepting chemotaxis protein McpU {ECO:0000313|EMBL:ACG77612.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacterium zucineum (strain HLK1).;"
S9_scaffold_436_curated_9
unknown

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9278..9478
DNA (201bp) protein (67aa)

This feature has no annotations

S9_scaffold_436_curated_10
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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9475..11052
DNA (1578bp) protein (526aa)
Methyl-accepting chemotaxis protein n=1 Tax=Caulobacter crescentus OR37 RepID=R0E643_CAUCE rbh
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:ENZ81028.1}; TaxID=1292034 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus OR37.;"
methyl-accepting chemotaxis sensory transducer rbh
S9_scaffold_436_curated_11
Beijerinckia indica, Beijerinckia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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11070..11357
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) RepID=B2IGA0_BEII9
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACB97174.1}; TaxID=395963 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Beijerinckia.;" source="Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB; 8712).;"
S9_scaffold_436_curated_12
Methylocella silvestris, Methylocella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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11359..11724
DNA (366bp) protein (122aa)
Response regulator receiver protein n=1 Tax=Methylosinus trichosporium OB3b RepID=D5QM52_METTR
response regulator receiver protein
Response regulator receiver protein {ECO:0000313|EMBL:ACK50411.1}; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906).;"
S9_scaffold_436_curated_13
Beijerinckia indica, Beijerinckia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11741..13957
DNA (2217bp) protein (739aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=395963 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Beijerinckia.;" source="Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB; 8712).;"
hypothetical protein n=1 Tax=Methyloferula stellata RepID=UPI00036A61EB rbh
CheA signal transduction histidine kinase rbh
S9_scaffold_436_curated_14
Beijerinckia indica, Beijerinckia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13954..14430
DNA (477bp) protein (159aa)
chemotaxis protein CheW n=1 Tax=Methyloferula stellata RepID=UPI00037F8B79
CheW protein
CheW protein {ECO:0000313|EMBL:ACB97177.1}; TaxID=395963 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Beijerinckia.;" source="Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB; 8712).;"
S9_scaffold_436_curated_15
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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14427..15311
DNA (885bp) protein (295aa)
CheR-type MCP methyltransferase (EC:2.1.1.80) rbh
hypothetical protein n=1 Tax=Methyloferula stellata RepID=UPI000362B074 rbh
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
S9_scaffold_436_curated_16
Rhizobium mesoamericanum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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15308..16375
DNA (1068bp) protein (356aa)
Chemotaxis response regulator protein-glutamate methylesterase {ECO:0000256|HAMAP-Rule:MF_00099}; EC=3.1.1.61 {ECO:0000256|HAMAP-Rule:MF_00099};; TaxID=1211777 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium mesoamericanum STM3625.;"
cheB; methyl-accepting chemotaxis protein methylesterase (EC:3.1.1.61)
Chemotaxis response regulator protein-glutamate methylesterase n=1 Tax=Rhizobium mesoamericanum STM3625 RepID=K0PCT7_9RHIZ rbh
S9_scaffold_436_curated_17

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16363..16752
DNA (390bp) protein (130aa)
Response regulator receiver protein n=1 Tax=Methylosinus trichosporium OB3b RepID=D5QM56_METTR
Uncharacterized protein {ECO:0000313|EMBL:KKN60324.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
response regulator receiver protein
S9_scaffold_436_curated_18
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16749..17291
DNA (543bp) protein (181aa)
Probable chemoreceptor glutamine deamidase CheD {ECO:0000256|HAMAP-Rule:MF_01440}; EC=3.5.1.44 {ECO:0000256|HAMAP-Rule:MF_01440};; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB; 11706 / TK 0415).;"
Probable chemoreceptor glutamine deamidase CheD n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JVY0_HYPDA
chemotaxis protein CheD
S9_scaffold_436_curated_19
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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17302..17694
DNA (393bp) protein (131aa)
hypothetical protein n=1 Tax=Rhizobium sp. 42MFCr.1 RepID=UPI00036A6412
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
S9_scaffold_436_curated_20
Nitratireductor aquibiodomus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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17838..18794
DNA (957bp) protein (319aa)
TRAP transporter solute receptor TAXI family protein n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5C1R6_9RHIZ rbh
TRAP transporter solute receptor TAXI family protein {ECO:0000313|EMBL:EIM75768.1}; TaxID=1189611 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor aquibiodomus RA22.;"
TRAP transporter solute receptor TAXI family protein rbh
S9_scaffold_436_curated_21
Nitratireductor aquibiodomus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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19077..21173
DNA (2097bp) protein (699aa)
TRAP transporter, 4TM/12TM fusion protein n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5C1R7_9RHIZ rbh
TRAP transporter, 4TM/12TM fusion protein {ECO:0000313|EMBL:EIM75769.1}; TaxID=1189611 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor aquibiodomus RA22.;"
TRAP transporter 4TM/12TM fusion protein rbh
S9_scaffold_436_curated_22
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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21181..21543
DNA (363bp) protein (121aa)
hypothetical protein n=1 Tax=Rhizobium loti RepID=UPI00035DBF94
Uncharacterized protein {ECO:0000313|EMBL:ESZ23243.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
hypothetical protein
S9_scaffold_436_curated_23
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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21677..22585
DNA (909bp) protein (303aa)
LysR family transcriptional regulator n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0I3M6_9RHIZ rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:EHK52403.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
LysR family transcriptional regulator rbh
S9_scaffold_436_curated_24
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22645..23259
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Rhodovulum sp. PH10 RepID=J6J0B9_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EJW10575.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
hypothetical protein
S9_scaffold_436_curated_25
Hoeflea sp. BAL378, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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23461..24618
DNA (1158bp) protein (386aa)
Spermidine/putrescine ABC transporter n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0I3M7_9RHIZ rbh
Spermidine/putrescine ABC transporter substrate-binding protein {ECO:0000313|EMBL:KGF68267.1}; TaxID=1547437 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BAL378.;"
Spermidine/putrescine ABC transporter rbh
S9_scaffold_436_curated_26
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24791..25789
DNA (999bp) protein (333aa)
ABC transporter ATP-binding protein n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FMF2_9RHIZ rbh
ABC transporter ATP-binding protein {ECO:0000313|EMBL:ESX81413.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
ABC-type spermidine/putrescine transport system, ATPase component rbh
S9_scaffold_436_curated_27
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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25786..26754
DNA (969bp) protein (323aa)
spermidine/putrescine ABC transporter permease n=1 Tax=Rhizobium loti RepID=UPI00037BC5C0 rbh
Inner membrane ABC transporter permease protein ydcU {ECO:0000313|EMBL:AID34198.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
ABC transporter permease rbh
S9_scaffold_436_curated_28
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26958..27773
DNA (816bp) protein (272aa)
ABC transporter integral membrane protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0I3N0_9RHIZ rbh
ABC transporter integral membrane protein {ECO:0000313|EMBL:EHK52407.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
Inner membrane ABC transporter permease protein
S9_scaffold_436_curated_29
Mesorhizobium australicum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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27792..29219
DNA (1428bp) protein (476aa)
NAD-dependent aldehyde dehydrogenase n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KBF3_MESAW rbh
NAD-dependent aldehyde dehydrogenase rbh
NAD-dependent aldehyde dehydrogenase {ECO:0000313|EMBL:AGB42647.1}; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073).;"
S9_scaffold_436_curated_30
Labrenzia aggregata, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(29601..30146)
DNA (546bp) protein (182aa)
Glyoxalase family protein n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NLT6_9RHOB rbh
Glyoxalase family protein {ECO:0000313|EMBL:EAV46031.1}; TaxID=384765 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenzia aggregata (strain ATCC 25650 / DSM 13394 / JCM 20685 / NBRC; 16684 / NCIMB 2208 / IAM 12614) (Stappia aggregata).;"
glyoxalase rbh
Displaying items 1-30 of 58 in total

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