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S9_scaffold_117_curated

Search features with annotation key words

Displaying items 1-30 of 90 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S9_scaffold_117_curated_1
unknown

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2..202
DNA (201bp) protein (67aa)

This feature has no annotations

S9_scaffold_117_curated_2
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(310..957)
DNA (648bp) protein (216aa)
isochorismatase n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B6C60D
Isochorismatase {ECO:0000313|EMBL:EZQ15797.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
isochorismatase family protein
S9_scaffold_117_curated_3
Nitratireductor basaltis, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(954..1988)
DNA (1035bp) protein (345aa)
ABC transporter permease n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B55528 rbh
Inner-membrane translocator {ECO:0000313|EMBL:KFB10861.1}; TaxID=472175 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor basaltis.;"
putative branched-chain amino acid ABC transporter permease rbh
S9_scaffold_117_curated_4
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1969..2859)
DNA (891bp) protein (297aa)
ABC transporter permease n=1 Tax=Desulfospira joergensenii RepID=UPI0003B3CD96 rbh
ABC transporter permease {ECO:0000313|EMBL:EZQ15799.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
putative branched-chain amino acid ABC transporter permease rbh
S9_scaffold_117_curated_5
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2856..3578)
DNA (723bp) protein (241aa)
amino acid ABC transporter ATPase n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B62BE7
Amino acid ABC transporter ATPase {ECO:0000313|EMBL:EXL06763.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
amino acid ABC transporter ATP-binding protein
S9_scaffold_117_curated_6
Nitratireductor basaltis, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3571..4386)
DNA (816bp) protein (272aa)
ABC transporter n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B6145B
ABC transporter related protein {ECO:0000313|EMBL:KFB10864.1}; TaxID=472175 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor basaltis.;"
branched chain amino acid ABC transporter ATP-binding protein
S9_scaffold_117_curated_7
Nitratireductor basaltis, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4500..5324
DNA (825bp) protein (275aa)
N-formylglutamate amidohydrolase n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LHA2_HALO1
N-formylglutamate amidohydrolase {ECO:0000313|EMBL:KFB10865.1}; TaxID=472175 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor basaltis.;"
N-formylglutamate amidohydrolase
S9_scaffold_117_curated_8
Mesorhizobium sp. L103C565B0, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5347..6066)
DNA (720bp) protein (240aa)
UPI0003CFFDA6 related cluster n=1 Tax=unknown RepID=UPI0003CFFDA6 rbh
Asp/Glu/hydantoin racemase {ECO:0000313|EMBL:ESZ52535.1}; TaxID=1287094 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L103C565B0.;"
hydantoin racemase rbh
S9_scaffold_117_curated_9
Rhizobium lupini, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6080..6898)
DNA (819bp) protein (273aa)
ABC transporter permease n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0003086DE8 rbh
Spermidine/putrescine ABC transporter permease {ECO:0000313|EMBL:EKJ93110.1}; TaxID=1229491 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium lupini HPC(L).;"
ABC transporter permease protein rbh
S9_scaffold_117_curated_10
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6900..7808)
DNA (909bp) protein (303aa)
ABC transporter permease n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00031F4008 rbh
ABC transporter, permease protein {ECO:0000313|EMBL:CCV08044.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
ABC transporter permease rbh
S9_scaffold_117_curated_11
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7918..9207)
DNA (1290bp) protein (430aa)
ABC transporter substrate-binding protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0003140E26 rbh
ABC transporter substrate-binding protein {ECO:0000313|EMBL:ESZ18510.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
putative spermidine/putrescine ABC transporter,substrate-binding protein rbh
S9_scaffold_117_curated_12
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9242..10330)
DNA (1089bp) protein (363aa)
Spermidine/putrescine ABC transporter ATPase n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FTD7_9RHIZ rbh
Spermidine/putrescine ABC transporter ATPase {ECO:0000313|EMBL:ESX82962.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
ABC transporter ATP-binding protein rbh
S9_scaffold_117_curated_13
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10592..11308
DNA (717bp) protein (239aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000309B8E9 rbh
Transcriptional regulator {ECO:0000313|EMBL:CCV08040.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
transcriptional regulator rbh
S9_scaffold_117_curated_14
Pelagibacterium halotolerans, Pelagibacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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11703..13523
DNA (1821bp) protein (607aa)
Allophanate hydrolase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4REN2_PELHB rbh
allophanate hydrolase rbh
Allophanate hydrolase {ECO:0000313|EMBL:AEQ50882.1}; TaxID=1082931 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Pelagibacterium.;" source="Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2).;"
S9_scaffold_117_curated_15
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

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13520..14500
DNA (981bp) protein (327aa)
Oxidoreductase, 2OG-Fe(II) oxygenase family n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2IWS0_POLGS rbh
2OG-Fe(II) oxygenase rbh
Oxidoreductase, 2OG-Fe(II) oxygenase family {ECO:0000313|EMBL:ADZ70395.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
S9_scaffold_117_curated_16
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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14719..15819
DNA (1101bp) protein (367aa)
ABC transporter substrate-binding protein n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2IWR9_POLGS rbh
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KFL32664.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
ABC transporter substrate-binding protein rbh
S9_scaffold_117_curated_17
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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16182..17291
DNA (1110bp) protein (370aa)
Probable sugar ABC transporter, permease protein n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2IWR8_POLGS rbh
ABC transporter permease {ECO:0000313|EMBL:KKB09630.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
sugar ABC transporter permease rbh
S9_scaffold_117_curated_18
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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17288..18208
DNA (921bp) protein (307aa)
Simple sugar transport system permease protein n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2IWR7_POLGS rbh
ABC transporter permease {ECO:0000313|EMBL:KKB09631.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
Simple sugar transporter permease rbh
S9_scaffold_117_curated_19
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18216..18950
DNA (735bp) protein (245aa)
Hypothetical isochorismatase family protein n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2IWR5_POLGS rbh
Cysteine hydrolase {ECO:0000313|EMBL:KKB09633.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
isochorismatase rbh
S9_scaffold_117_curated_20
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18947..20509
DNA (1563bp) protein (521aa)
Predicted ABC-type uncharacterized transport system, ATPase component n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2IWR4_POLGS rbh
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KKB09634.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
ABC transporter ATPase rbh
S9_scaffold_117_curated_21
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20652..21332
DNA (681bp) protein (227aa)
Isochorismatase family protein n=1 Tax=Pseudomonas psychrotolerans L19 RepID=H0JJC1_9PSED rbh
Cysteine hydrolase {ECO:0000313|EMBL:KFL32659.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
isochorismatase hydrolase rbh
S9_scaffold_117_curated_22
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21325..22095
DNA (771bp) protein (257aa)
hypothetical protein n=1 Tax=Meganema perideroedes RepID=UPI0003710329 rbh
5-formyltetrahydrofolate cyclo-ligase {ECO:0000313|EMBL:KFL32658.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
5-formyltetrahydrofolate cyclo-ligase
S9_scaffold_117_curated_23
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22098..22475
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Methylobacterium sp. GXF4 RepID=I9WQH1_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KKB09637.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
protein of unassigned function
S9_scaffold_117_curated_24
unknown

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comp(22607..23020)
DNA (414bp) protein (138aa)

This feature has no annotations

S9_scaffold_117_curated_25
Oceanicola batsensis, Oceanicola, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(23457..24188)
DNA (732bp) protein (244aa)
Probable short chain dehydrogenase n=1 Tax=Oceanicola batsensis HTCC2597 RepID=A3U0E1_9RHOB
Probable short chain dehydrogenase {ECO:0000313|EMBL:EAQ02232.1}; TaxID=252305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanicola.;" source="Oceanicola batsensis (strain ATCC BAA-863 / DSM 15984 / HTCC2597).;"
short-chain dehydrogenase/reductase SDR
S9_scaffold_117_curated_26
Oceanicola batsensis, Oceanicola, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24185..24826)
DNA (642bp) protein (214aa)
isochorismatase hydrolase (EC:3.5.1.59)
Hydrolase, isochorismatase family protein n=1 Tax=Oceanicola batsensis HTCC2597 RepID=A3U0E0_9RHOB rbh
Hydrolase, isochorismatase family protein {ECO:0000313|EMBL:EAQ02231.1}; TaxID=252305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanicola.;" source="Oceanicola batsensis (strain ATCC BAA-863 / DSM 15984 / HTCC2597).;"
S9_scaffold_117_curated_27
Citreicella sp. SE45, Citreicella, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24840..25700)
DNA (861bp) protein (287aa)
Carboxyvinyl-carboxyphosphonate phosphorylmutase {ECO:0000313|EMBL:EEX12313.1}; EC=2.7.8.23 {ECO:0000313|EMBL:EEX12313.1};; TaxID=501479 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Citreicella.;" source="Citreicella sp. SE45.;"
2,3-dimethylmalate lyase (EC:4.1.3.32) rbh
Carboxyvinyl-carboxyphosphonate phosphorylmutase n=1 Tax=Citreicella sp. SE45 RepID=D0DCC9_9RHOB rbh
S9_scaffold_117_curated_28
Oceanicola batsensis, Oceanicola, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25723..26469)
DNA (747bp) protein (249aa)
Putative decarboxylase n=1 Tax=Oceanicola batsensis HTCC2597 RepID=A3U0D8_9RHOB
Putative decarboxylase {ECO:0000313|EMBL:EAQ02229.1}; TaxID=252305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanicola.;" source="Oceanicola batsensis (strain ATCC BAA-863 / DSM 15984 / HTCC2597).;"
decarboxylase
S9_scaffold_117_curated_29
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26703..27461
DNA (759bp) protein (253aa)
Transcriptional regulator n=1 Tax=Rhizobium sp. CF142 RepID=J2LEH7_9RHIZ
Transcriptional regulator {ECO:0000313|EMBL:EJJ31489.1}; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
mngR; Mannosyl-D-glycerate transport/metabolism system repressor mngR
S9_scaffold_117_curated_30
Oceanicola batsensis, Oceanicola, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27482..28360)
DNA (879bp) protein (293aa)
Putative beta-lactamase n=1 Tax=Oceanicola batsensis HTCC2597 RepID=A3U0D6_9RHOB rbh
Putative beta-lactamase {ECO:0000313|EMBL:EAQ02227.1}; TaxID=252305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanicola.;" source="Oceanicola batsensis (strain ATCC BAA-863 / DSM 15984 / HTCC2597).;"
Beta-lactamase-like protein
Displaying items 1-30 of 90 in total

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