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S9_scaffold_185_curated

Search features with annotation key words

Displaying items 1-30 of 82 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S9_scaffold_185_curated_1
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..2326
DNA (2325bp) protein (775aa)
Translation initiation factor IF-2 n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EG37_9RHIZ rbh
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
translation initiation factor IF-2 rbh
S9_scaffold_185_curated_2
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2542..2955
DNA (414bp) protein (138aa)
Ribosome-binding factor A n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HJW2_9RHIZ
Ribosome-binding factor A {ECO:0000256|HAMAP-Rule:MF_00003, ECO:0000256|SAAS:SAAS00023386}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
rbfA; ribosome-binding factor A
S9_scaffold_185_curated_3
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2955..3938
DNA (984bp) protein (328aa)
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043051}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043054};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
tRNA pseudouridine synthase B n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HJW1_9RHIZ rbh
truB; tRNA pseudouridine synthase B rbh
S9_scaffold_185_curated_4
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4017..5096
DNA (1080bp) protein (360aa)
UPI0003D05023 related cluster n=1 Tax=unknown RepID=UPI0003D05023 rbh
magnesium and cobalt transport protein CorA rbh
Magnesium transport protein CorA {ECO:0000256|RuleBase:RU362010}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
S9_scaffold_185_curated_5
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5301..5825
DNA (525bp) protein (175aa)
Uncharacterized protein n=7 Tax=Bacteria RepID=H0P0T8_9SYNC
Bacterial SH3 domain-containing protein {ECO:0000313|EMBL:EYR84147.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
ssl1792; hypothetical protein
S9_scaffold_185_curated_6
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


6024..6293
DNA (270bp) protein (90aa)
30S ribosomal protein S15 n=1 Tax=Nitratireductor indicus C115 RepID=K2PB31_9RHIZ
30S ribosomal protein S15 {ECO:0000256|HAMAP-Rule:MF_01343, ECO:0000256|RuleBase:RU003920}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
30S ribosomal protein S15
S9_scaffold_185_curated_7
Mesorhizobium sp. LSHC426A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6567..8717
DNA (2151bp) protein (717aa)
Polyribonucleotide nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01595}; EC=2.7.7.8 {ECO:0000256|HAMAP-Rule:MF_01595};; Polynucleotide phosphorylase {ECO:0000256|HAMAP-Rule:MF_01595}; TaxID=1287298 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC426A00.;"
polyribonucleotide nucleotidyltransferase (EC:2.7.7.8) rbh
UPI0003CF29A1 related cluster n=1 Tax=unknown RepID=UPI0003CF29A1 rbh
S9_scaffold_185_curated_8
Mesorhizobium sp. LNHC221B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9480..9908)
DNA (429bp) protein (143aa)
UPI0003CF53BB related cluster n=1 Tax=unknown RepID=UPI0003CF53BB
Fur family transcriptional regulator {ECO:0000313|EMBL:ESY77537.1}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC221B00.;"
Fur family ferric uptake regulator
S9_scaffold_185_curated_9
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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10155..10670
DNA (516bp) protein (172aa)
3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase {ECO:0000256|HAMAP-Rule:MF_00405, ECO:0000256|SAAS:SAAS00064161}; EC=4.2.1.59 {ECO:0000256|HAMAP-Rule:MF_00405, ECO:0000256|SAAS:SAAS00064166};; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabA {ECO:0000256|HAMAP-Rule:MF_00405}; Beta-hydroxydecanoyl thioester dehydrase {ECO:0000256|HAMAP-Rule:MF_00405}; Trans-2-decenoyl-[acyl-carrier-protein] isomerase {ECO:0000256|HAMAP-Rule:MF_00405}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA (EC:4.2.1.60) rbh
UPI0003CF1F7D related cluster n=1 Tax=unknown RepID=UPI0003CF1F7D rbh
S9_scaffold_185_curated_10
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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10704..11924
DNA (1221bp) protein (407aa)
3-oxoacyl-ACP synthase {ECO:0000313|EMBL:ESZ11818.1}; EC=2.3.1.41 {ECO:0000313|EMBL:ESZ11818.1};; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
UPI0003D05D59 related cluster n=1 Tax=unknown RepID=UPI0003D05D59 rbh
beta-ketoacyl synthase rbh
S9_scaffold_185_curated_11
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11937..12737
DNA (801bp) protein (267aa)
Enoyl-[acyl-carrier-protein] reductase [NADH] {ECO:0000256|PIRNR:PIRNR000094}; EC=1.3.1.9 {ECO:0000256|PIRNR:PIRNR000094};; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
short-chain dehydrogenase/reductase SDR (EC:1.3.1.9) rbh
Enoyl-[acyl-carrier-protein] reductase [NADH] n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HJV4_9RHIZ rbh
S9_scaffold_185_curated_12
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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12950..14479
DNA (1530bp) protein (510aa)
Diguanylate cyclase/phosphodiesterase n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FM49_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:CDX16238.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
hypothetical protein rbh
S9_scaffold_185_curated_13
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(14514..15536)
DNA (1023bp) protein (341aa)
Methyltransferase small n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7YE52_MESOW rbh
methyltransferase small rbh
Methyltransferase small {ECO:0000313|EMBL:AEH84512.1}; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
S9_scaffold_185_curated_14
Mesorhizobium sp. LNHC209A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15591..16157)
DNA (567bp) protein (189aa)
UPI0003CE1F6A related cluster n=1 Tax=unknown RepID=UPI0003CE1F6A
Uncharacterized protein {ECO:0000313|EMBL:ESY94785.1}; TaxID=1287226 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC209A00.;"
hypothetical protein
S9_scaffold_185_curated_15
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16326..17327
DNA (1002bp) protein (334aa)
Glyoxylate reductase (EC:1.1.1.26) rbh
D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HJU8_9RHIZ rbh
D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding protein {ECO:0000313|EMBL:EHK59011.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
S9_scaffold_185_curated_16
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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17405..18184
DNA (780bp) protein (260aa)
thiamine biosynthesis protein ThiF n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002EA18B4 rbh
Molybdopterin biosynthesis protein MoeB {ECO:0000313|EMBL:EKF19456.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
UBA/THIF-type NAD/FAD binding protein rbh
S9_scaffold_185_curated_17
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18188..19441
DNA (1254bp) protein (418aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HJU6_9RHIZ rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EHK59009.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
hypothetical protein
S9_scaffold_185_curated_18
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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19438..19878
DNA (441bp) protein (147aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YBT9_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CDX50824.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
hypothetical protein
S9_scaffold_185_curated_19
unknown

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19950..20099
DNA (150bp) protein (50aa)

This feature has no annotations

S9_scaffold_185_curated_20
unknown

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20252..20401
DNA (150bp) protein (50aa)

This feature has no annotations

S9_scaffold_185_curated_21
Tistrella mobilis, Tistrella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20770..21066
DNA (297bp) protein (99aa)
hypothetical protein n=1 Tax=Xanthobacteraceae RepID=UPI0003770588
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFK57468.1}; TaxID=1110502 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Tistrella.;" source="Tistrella mobilis (strain KA081020-065).;"
S9_scaffold_185_curated_22
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21106..22023
DNA (918bp) protein (306aa)
Putative uncharacterized protein n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0QC24_ACIAP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADX45011.1}; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB; 1011).;"
S9_scaffold_185_curated_23
Phyllobacterium sp. YR531, Phyllobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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22113..22577
DNA (465bp) protein (155aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000361A23E
Uncharacterized protein {ECO:0000313|EMBL:EJM99564.1}; Flags: Precursor; Fragment;; TaxID=1144343 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Phyllobacterium.;" source="Phyllobacterium sp. YR531.;"
Hypothetical protein
S9_scaffold_185_curated_24
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23054..24859)
DNA (1806bp) protein (602aa)
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP-Rule:MF_00071}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
Elongation factor 4 n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HJZ3_9RHIZ rbh
GTP-binding protein LepA rbh
S9_scaffold_185_curated_25
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24942..25604)
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8P6F3_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS34008.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
transcriptional regulator, TetR family
S9_scaffold_185_curated_26
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25845..26795
DNA (951bp) protein (317aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8NZT8_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS34009.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
Homocysteine S-methyltransferase rbh
S9_scaffold_185_curated_27
unknown

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26827..27018
DNA (192bp) protein (64aa)

This feature has no annotations

S9_scaffold_185_curated_28
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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27176..27634
DNA (459bp) protein (153aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
Alkylhydroperoxidase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HK01_9RHIZ
alkylhydroperoxidase
S9_scaffold_185_curated_29
unknown

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27766..28050
DNA (285bp) protein (95aa)

This feature has no annotations

S9_scaffold_185_curated_30
Moorea producens, Moorea, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

28068..29456
DNA (1389bp) protein (463aa)
Subtilisin-like serine protease n=1 Tax=Moorea producens 3L RepID=F4XT49_9CYAN
Subtilisin-like serine protease {ECO:0000313|EMBL:EGJ32224.1}; TaxID=489825 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Moorea.;" source="Moorea producens 3L.;"
peptidase
Displaying items 1-30 of 82 in total

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