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S9_scaffold_28_curated

Search features with annotation key words

Displaying items 1-30 of 250 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S9_scaffold_28_curated_1
unknown

Not on your lists

2..70
DNA (69bp) protein (23aa)

This feature has no annotations

S9_scaffold_28_curated_2
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

243..521
DNA (279bp) protein (93aa)
Site-specific recombinase, DNA invertase Pin-like protein n=1 Tax=Sinorhizobium meliloti GR4 RepID=M4IR32_RHIML
Site-specific recombinase, DNA invertase Pin-like protein
Resolvase domain-containing protein {ECO:0000313|EMBL:EKF40237.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
S9_scaffold_28_curated_3
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(815..1219)
DNA (405bp) protein (135aa)
MerR family transcriptional regulator n=1 Tax=Nitratireductor indicus C115 RepID=K2MYC2_9RHIZ
MerR family transcriptional regulator {ECO:0000313|EMBL:EKF40238.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
MerR family transcriptional regulator
S9_scaffold_28_curated_4
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1290..1949)
DNA (660bp) protein (220aa)
DSBA oxidoreductase n=1 Tax=Nitratireductor indicus C115 RepID=K2NQW7_9RHIZ rbh
DSBA oxidoreductase {ECO:0000313|EMBL:EKF40239.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
DSBA oxidoreductase
S9_scaffold_28_curated_5
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2608..4740
DNA (2133bp) protein (711aa)
copper-translocating P-type ATPase (EC:3.6.3.4)
Heavy metal translocating P-type ATPase n=1 Tax=Nitratireductor indicus C115 RepID=K2NYT2_9RHIZ rbh
Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:EKF40241.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
S9_scaffold_28_curated_6
Rhizobium sp. H41, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4807..5424
DNA (618bp) protein (206aa)
Co/Zn/Cd efflux system component n=1 Tax=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) RepID=A6X3W1_OCHA4 rbh
cation efflux family protein
Cation transporter {ECO:0000313|EMBL:KGE81710.1}; TaxID=1510041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. H41.;"
S9_scaffold_28_curated_7
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5417..5920
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Nitratireductor indicus C115 RepID=K2MYC6_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:EKF40243.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
hypothetical protein
S9_scaffold_28_curated_8
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5917..6537
DNA (621bp) protein (207aa)
Electron transport protein SCO1/SenC n=1 Tax=Nitratireductor indicus C115 RepID=K2NQX0_9RHIZ rbh
Electron transport protein SCO1/SenC {ECO:0000313|EMBL:EKF40244.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
SCO1/SenC family protein
S9_scaffold_28_curated_9
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6537..7280
DNA (744bp) protein (248aa)
Cytochrome c biogenesis protein transmembrane region n=1 Tax=Nitratireductor indicus C115 RepID=K2NLB4_9RHIZ rbh
Cytochrome c biogenesis protein transmembrane region {ECO:0000313|EMBL:EKF40245.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
cytochrome C biogenesis transmembrane region family protein
S9_scaffold_28_curated_10
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7306..7770
DNA (465bp) protein (155aa)
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594};; Prolipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161}; Signal peptidase II {ECO:0000256|HAMAP-Rule:MF_00161}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
lspA; signal peptidase II (EC:3.4.23.36)
Lipoprotein signal peptidase n=1 Tax=Nitratireductor indicus C115 RepID=K2NYT6_9RHIZ rbh
S9_scaffold_28_curated_11
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7767..8879
DNA (1113bp) protein (371aa)
hypothetical protein n=1 Tax=Martelella mediterranea RepID=UPI00036A9443 rbh
FAD-dependent pyridine nucleotide-disulfide oxidoreductase rbh
FAD-dependent pyridine nucleotide-disulphide oxidoreductase {ECO:0000313|EMBL:ABS65067.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
S9_scaffold_28_curated_12
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9039..11132
DNA (2094bp) protein (698aa)
Transposase for transposon Tn3926 n=1 Tax=Rhizobium fredii (strain HH103) RepID=G9A3E3_RHIFH rbh
tnpa9; transposase for transposon Tn3926 rbh
Transposase for transposon Tn3926 {ECO:0000313|EMBL:CCE97891.1}; TaxID=1117943 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium fredii (strain HH103) (Sinorhizobium fredii).;"
S9_scaffold_28_curated_13
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11129..11305)
DNA (177bp) protein (59aa)
Uncharacterized protein n=2 Tax=Oligotropha carboxidovorans RepID=F8BQJ6_OLICM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI08089.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
S9_scaffold_28_curated_14
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11286..12026)
DNA (741bp) protein (247aa)
Uncharacterized protein n=2 Tax=Oligotropha carboxidovorans RepID=F8BQJ7_OLICM rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEI08090.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
S9_scaffold_28_curated_15
unknown

Not on your lists

comp(12252..12782)
DNA (531bp) protein (177aa)

This feature has no annotations

S9_scaffold_28_curated_16
unknown

Not on your lists

12999..13124
DNA (126bp) protein (42aa)

This feature has no annotations

S9_scaffold_28_curated_17
Sinorhizobium sp. M14, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13288..13428
DNA (141bp) protein (47aa)
Uncharacterized protein n=1 Tax=Sinorhizobium sp. M14 RepID=R4IL76_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:AFR74915.1}; TaxID=430451 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium sp. M14.;"
S9_scaffold_28_curated_18
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13411..13851)
DNA (441bp) protein (147aa)
MerR n=2 Tax=Rhizobiales RepID=R4ILG1_9RHIZ
merR1; mercuric resistance operon regulatory protein
Putative transcriptional regulator, MerR family {ECO:0000313|EMBL:ABS15864.1}; TaxID=439375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168).;"
S9_scaffold_28_curated_19
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13937..14362
DNA (426bp) protein (142aa)
Mercuric transport protein MerT n=2 Tax=Rhizobiales RepID=A6X3R1_OCHA4
mercuric transporter MerT
Mercuric transport protein MerT {ECO:0000313|EMBL:ABS15865.1}; TaxID=439375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168).;"
S9_scaffold_28_curated_20
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14383..14676
DNA (294bp) protein (98aa)
Heavy metal transport/detoxification protein n=2 Tax=Rhizobiales RepID=A6X3R2_OCHA4
heavy metal transport/detoxification protein
Heavy metal transport/detoxification protein {ECO:0000313|EMBL:ABS15866.1}; Flags: Precursor;; TaxID=439375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168).;"
S9_scaffold_28_curated_21
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14677..14925
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) RepID=A6X3R3_OCHA4
putative membrane protein
Uncharacterized protein {ECO:0000313|EMBL:ABS15867.1}; Flags: Precursor;; TaxID=439375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168).;"
S9_scaffold_28_curated_22
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14922..17159
DNA (2238bp) protein (746aa)
merA; mercuric reductase (EC:1.16.1.1)
Mercuric reductase n=2 Tax=Rhizobiales RepID=A6X3R4_OCHA4 rbh
Mercuric reductase {ECO:0000313|EMBL:ABS15868.1}; TaxID=439375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168).;"
S9_scaffold_28_curated_23
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17172..17546)
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) RepID=A6X3R5_OCHA4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS15869.1}; TaxID=439375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168).;"
S9_scaffold_28_curated_24
Paracoccus versutus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17543..19687)
DNA (2145bp) protein (715aa)
Uncharacterized protein n=1 Tax=Sinorhizobium sp. M14 RepID=R4ILG2_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:KGJ12603.1}; TaxID=34007 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus versutus (Thiobacillus versutus).;"
hypothetical protein rbh
S9_scaffold_28_curated_25
Sinorhizobium sp. M14, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19684..21492)
DNA (1809bp) protein (603aa)
Uncharacterized protein n=2 Tax=Rhizobiales RepID=A6X3R7_OCHA4 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFR74917.1}; TaxID=430451 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium sp. M14.;"
S9_scaffold_28_curated_26
Sinorhizobium sp. M14, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21492..22931)
DNA (1440bp) protein (480aa)
Phage integrase domain protein SAM domain protein n=2 Tax=Rhizobiales RepID=A6X3R8_OCHA4 rbh
phage integrase family protein
Uncharacterized protein {ECO:0000313|EMBL:AFR74918.1}; TaxID=430451 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium sp. M14.;"
S9_scaffold_28_curated_27
unknown

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comp(23055..23174)
DNA (120bp) protein (40aa)

This feature has no annotations

S9_scaffold_28_curated_28
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23400..24341
DNA (942bp) protein (314aa)
Uncharacterized protein n=1 Tax=Agrobacterium tumefaciens str. Cherry 2E-2-2 RepID=M8AUV2_RHIRD rbh
Uncharacterized protein {ECO:0000313|EMBL:EMS94836.1}; TaxID=1281779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens str. Cherry 2E-2-2.;"
hypothetical protein rbh
S9_scaffold_28_curated_29
unknown

Not on your lists

24515..24736
DNA (222bp) protein (74aa)

This feature has no annotations

S9_scaffold_28_curated_30
unknown

Not on your lists

25027..25281
DNA (255bp) protein (85aa)

This feature has no annotations

Displaying items 1-30 of 250 in total

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