ggKbase home page

OR_07182017_22_scaffold_31

Search features with annotation key words

Displaying items 1-30 of 114 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_07182017_22_scaffold_31_1
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..434)
DNA (432bp) protein (144aa)
Putative uncharacterized protein Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KY88_HALNC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACX95411.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_07182017_22_scaffold_31_2
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(434..970)
DNA (537bp) protein (179aa)
Putative uncharacterized protein Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KY87_HALNC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACX95410.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_07182017_22_scaffold_31_3
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1136..2161)
DNA (1026bp) protein (342aa)
Beta-lactamase domain protein Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KY86_HALNC
beta-lactamase
Beta-lactamase domain protein {ECO:0000313|EMBL:ACX95409.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_07182017_22_scaffold_31_4
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2420..2878
DNA (459bp) protein (153aa)
Ferric uptake regulator, Fur family Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KY85_HALNC
Fur family ferric uptake regulator
Ferric uptake regulator, Fur family {ECO:0000313|EMBL:ACX95408.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_07182017_22_scaffold_31_5
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3022..3612
DNA (591bp) protein (197aa)
Methyltransferase small Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KY84_HALNC
methyltransferase small
Methyltransferase small {ECO:0000313|EMBL:ACX95407.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_07182017_22_scaffold_31_6
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3688..4626
DNA (939bp) protein (313aa)
Mg2 transporter protein CorA family protein Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KY83_HALNC
Mg2 transporter protein CorA family protein
Mg2 transporter protein CorA family protein {ECO:0000313|EMBL:ACX95406.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_07182017_22_scaffold_31_7
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4618..5232)
DNA (615bp) protein (205aa)
Methionine biosynthesis protein MetW Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L1T5_HALNC
methionine biosynthesis protein MetW
Methionine biosynthesis protein MetW {ECO:0000313|EMBL:ACX96658.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_07182017_22_scaffold_31_8
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5229..6428)
DNA (1200bp) protein (400aa)
homoserine O-acetyltransferase (EC:2.3.1.31)
Homoserine O-acetyltransferase {ECO:0000256|HAMAP-Rule:MF_00296, ECO:0000256|SAAS:SAAS00070949}; EC=2.3.1.31 {ECO:0000256|HAMAP-Rule:MF_00296, ECO:0000256|SAAS:SAAS00070942};; Homoserine O-trans-acetylase {ECO:0000256|HAMAP-Rule:MF_00296}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
Homoserine O-acetyltransferase Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L1T6_HALNC
OR_07182017_22_scaffold_31_9
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6472..7020)
DNA (549bp) protein (183aa)
Putative uncharacterized protein Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L1T7_HALNC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACX96660.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_07182017_22_scaffold_31_10
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7017..7868)
DNA (852bp) protein (284aa)
pyrroline-5-carboxylate reductase (EC:1.5.1.2)
Pyrroline-5-carboxylate reductase {ECO:0000256|HAMAP-Rule:MF_01925, ECO:0000256|RuleBase:RU003903}; Short=P5C reductase {ECO:0000256|HAMAP-Rule:MF_01925};; Short=P5CR {ECO:0000256|HAMAP-Rule:MF_01925};; EC=1.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01925, ECO:0000256|RuleBase:RU003903};; PCA reductase {ECO:0000256|HAMAP-Rule:MF_01925}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
Pyrroline-5-carboxylate reductase Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L1T8_HALNC
OR_07182017_22_scaffold_31_11
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7981..8649)
DNA (669bp) protein (223aa)
Alanine racemase domain protein Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L1T9_HALNC
alanine racemase domain-containing protein
Alanine racemase domain protein {ECO:0000313|EMBL:ACX96662.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_07182017_22_scaffold_31_12
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8849..9898
DNA (1050bp) protein (350aa)
Twitching motility protein Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L1U0_HALNC
twitching motility protein
Twitching motility protein {ECO:0000313|EMBL:ACX96663.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_07182017_22_scaffold_31_13
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9959..11104
DNA (1146bp) protein (382aa)
Twitching motility protein Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L1U1_HALNC
twitching motility protein
Twitching motility protein {ECO:0000313|EMBL:ACX96664.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_07182017_22_scaffold_31_14
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11196..12359
DNA (1164bp) protein (388aa)
Twitching motility protein Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L1U2_HALNC
twitching motility protein
Twitching motility protein {ECO:0000313|EMBL:ACX96665.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_07182017_22_scaffold_31_15
unknown

Not on your lists

comp(12448..12960)
DNA (513bp) protein (171aa)

This feature has no annotations

OR_07182017_22_scaffold_31_16
Methylomonas methanica, Methylomonas, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12957..13928)
DNA (972bp) protein (324aa)
cytochrome oxidase assembly protein Tax=Methylomicrobium buryatense RepID=UPI00034737C9
cytochrome oxidase assembly
Cytochrome oxidase assembly {ECO:0000313|EMBL:AEG00333.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomonas.;" source="Methylomonas methanica (strain MC09).;"
OR_07182017_22_scaffold_31_17
unknown

Not on your lists

comp(13939..14910)
DNA (972bp) protein (324aa)

This feature has no annotations

OR_07182017_22_scaffold_31_18
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14920..15840)
DNA (921bp) protein (307aa)
Protoheme IX farnesyltransferase {ECO:0000255|HAMAP-Rule:MF_00154}; EC=2.5.1.- {ECO:0000255|HAMAP-Rule:MF_00154};; Heme B farnesyltransferase {ECO:0000255|HAMAP-Rule:MF_00154}; Heme O synthase {ECO:0000255|HAMAP-Rule:MF_00154}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio sulfidiphilus (strain HL-EbGR7).;"
protoheme IX farnesyltransferase Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI000369172C
protoheme IX farnesyltransferase
OR_07182017_22_scaffold_31_19
unknown

Not on your lists

16014..16163
DNA (150bp) protein (50aa)

This feature has no annotations

OR_07182017_22_scaffold_31_20
Solemya velum gill symbiont, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16174..16659
DNA (486bp) protein (162aa)
Ba3-type cytochrome c oxidase CydAB, subunit B {ECO:0000313|EMBL:KHF25116.1}; EC=1.9.3.1 {ECO:0000313|EMBL:KHF25116.1};; species="Bacteria; Proteobacteria; Gammaproteobacteria; sulfur-oxidizing symbionts.;" source="Solemya velum gill symbiont.;"
cytochrome C oxidase subunit II Tax=Methylohalobius crimeensis RepID=UPI0003B797E8
cytochrome C oxidase subunit II
OR_07182017_22_scaffold_31_21
Solemya velum gill symbiont, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16672..18354
DNA (1683bp) protein (561aa)
Ba3-type cytochrome c oxidase CydAB, subunit A {ECO:0000313|EMBL:KHF25115.1}; EC=1.9.3.1 {ECO:0000313|EMBL:KHF25115.1};; species="Bacteria; Proteobacteria; Gammaproteobacteria; sulfur-oxidizing symbionts.;" source="Solemya velum gill symbiont.;"
cytochrome C oxidase subunit I Tax=Methylomicrobium buryatense RepID=UPI000349767E
cytochrome C oxidase subunit I
OR_07182017_22_scaffold_31_22
BJP_IG2158_Methylococcales_50_91, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18385..19098
DNA (714bp) protein (238aa)
hypothetical protein Tax=Methylobacter marinus RepID=UPI0003656DBE
cytochrome c family protein
Tax=BJP_IG2158_Methylococcales_50_91
OR_07182017_22_scaffold_31_23
R_Rhodocyclales_63_24, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19279..21795
DNA (2517bp) protein (839aa)
Heavy metal translocating P-type ATPase Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SH92_THIDA
ATPase, E1-E2 type:copper-translocating P-type ATPase:heavy metal translocating P-type ATPase
Tax=RIFCSPLOWO2_02_FULL_Rhodocyclales_63_24_curated
OR_07182017_22_scaffold_31_24
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21792..22484
DNA (693bp) protein (231aa)
Electron transport protein SCO1/SenC Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KVG5_HALNC
Uncharacterized protein {ECO:0000313|EMBL:KHD04448.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;" source="Candidatus Thiomargarita nelsonii.;"
hypothetical protein
OR_07182017_22_scaffold_31_25
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22712..23071
DNA (360bp) protein (120aa)
Cytochrome c class I Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L1U3_HALNC
cytochrome C class I
Cytochrome c class I {ECO:0000313|EMBL:ACX96666.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_07182017_22_scaffold_31_26
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23080..24441
DNA (1362bp) protein (454aa)
FAD-dependent pyridine nucleotide-disulphide oxidoreductase Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L1U4_HALNC
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
FAD-dependent pyridine nucleotide-disulphide oxidoreductase {ECO:0000313|EMBL:ACX96667.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_07182017_22_scaffold_31_27
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24768..26231
DNA (1464bp) protein (488aa)
Cytochrome c class I Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L1U5_HALNC
cytochrome C class I
Cytochrome c class I {ECO:0000313|EMBL:ACX96668.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_07182017_22_scaffold_31_28
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26235..27464
DNA (1230bp) protein (410aa)
Putative uncharacterized protein Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L1U6_HALNC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACX96669.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_07182017_22_scaffold_31_29
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27522..28244
DNA (723bp) protein (241aa)
Cytochrome c class I Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L1U7_HALNC
cytochrome C class I
Cytochrome c class I {ECO:0000313|EMBL:ACX96670.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_07182017_22_scaffold_31_30
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28561..29703)
DNA (1143bp) protein (381aa)
Cell division protein FtsZ Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KXY9_HALNC
cell division protein FtsZ
Cell division protein FtsZ {ECO:0000256|HAMAP-Rule:MF_00909, ECO:0000256|RuleBase:RU000631}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
Displaying items 1-30 of 114 in total

View Taxonomy