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OR_07182017_22_scaffold_113

Search features with annotation key words

Displaying items 1-30 of 49 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_07182017_22_scaffold_113_1
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(79..984)
DNA (906bp) protein (302aa)
Type II site-specific deoxyribonuclease Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4DC30_9GAMM
type II restriction endonuclease BsuBI
Type II restriction endonuclease BsuBI {ECO:0000313|EMBL:AHF01741.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
OR_07182017_22_scaffold_113_2
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(996..2519)
DNA (1524bp) protein (508aa)
Site-specific DNA-methyltransferase (Adenine-specific) Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4DC31_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF02353.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
OR_07182017_22_scaffold_113_3
RIFOXYD2_FULL_Sulfurimonas_34_21_curated, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2624..3064)
DNA (441bp) protein (147aa)
Uncharacterized protein Tax=Allochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 103801 / D) RepID=D3RP80_ALLVD
hypothetical protein
Tax=RIFOXYD2_FULL_Sulfurimonas_34_21_curated
OR_07182017_22_scaffold_113_4
Nitrosomonas sp. AL212, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3662..4039)
DNA (378bp) protein (126aa)
Transcriptional regulator, XRE family Tax=Nitrosomonas sp. AL212 RepID=F9ZI92_9PROT
XRE family transcriptional regulator
Transcriptional regulator, XRE family {ECO:0000313|EMBL:ADZ26315.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas sp. AL212.;"
OR_07182017_22_scaffold_113_5
Nitrosomonas sp. AL212, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4048..4272)
DNA (225bp) protein (75aa)
Putative uncharacterized protein Tax=Nitrosomonas sp. AL212 RepID=F9ZI93_9PROT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADZ26316.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas sp. AL212.;"
OR_07182017_22_scaffold_113_6
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4397..4837)
DNA (441bp) protein (147aa)
Single-stranded DNA-binding protein Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L1A3_HALNC
single-strand binding protein
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_07182017_22_scaffold_113_7
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4850..7324)
DNA (2475bp) protein (825aa)
TRAG family protein Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L1A2_HALNC
TRAG family protein {ECO:0000313|EMBL:ACX96475.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
TRAG family protein
OR_07182017_22_scaffold_113_8
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7395..9266)
DNA (1872bp) protein (624aa)
Putative uncharacterized protein Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L1A1_HALNC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACX96474.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_07182017_22_scaffold_113_9
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9263..9451)
DNA (189bp) protein (63aa)
Putative uncharacterized protein Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L1A0_HALNC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACX96473.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_07182017_22_scaffold_113_10
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9477..10568)
DNA (1092bp) protein (364aa)
Putative uncharacterized protein Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L198_HALNC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACX96471.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_07182017_22_scaffold_113_11
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10584..11231)
DNA (648bp) protein (216aa)
Putative uncharacterized protein Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L197_HALNC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACX96470.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_07182017_22_scaffold_113_12
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11228..12688)
DNA (1461bp) protein (487aa)
Type IV secretory pathway VirD2 pilin (Relaxase)-like protein Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L196_HALNC
type IV secretory pathway VirD2 pilin (relaxase)-like protein
Type IV secretory pathway VirD2 pilin (Relaxase)-like protein {ECO:0000313|EMBL:ACX96469.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_07182017_22_scaffold_113_13
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12755..13099)
DNA (345bp) protein (115aa)
Putative uncharacterized protein Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L195_HALNC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACX96468.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_07182017_22_scaffold_113_14
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13096..13311)
DNA (216bp) protein (72aa)
Putative uncharacterized protein Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L194_HALNC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACX96467.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_07182017_22_scaffold_113_15
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13298..13768)
DNA (471bp) protein (157aa)
Putative uncharacterized protein Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L193_HALNC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACX96466.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_07182017_22_scaffold_113_16
unknown

Not on your lists

comp(13809..14078)
DNA (270bp) protein (90aa)

This feature has no annotations

OR_07182017_22_scaffold_113_17
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14355..15335
DNA (981bp) protein (327aa)
Putative uncharacterized protein Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L189_HALNC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACX96462.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_07182017_22_scaffold_113_18
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15417..16115
DNA (699bp) protein (233aa)
Putative uncharacterized protein Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JTZ0_9GAMM
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:AEM46742.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
OR_07182017_22_scaffold_113_19
Aromatoleum aromaticum, Aromatoleum, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16130..16594)
DNA (465bp) protein (155aa)
hypothetical protein Tax=Methylosarcina fibrata RepID=UPI00037E08A5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI09968.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Aromatoleum.;" source="Aromatoleum aromaticum (strain EbN1) (Azoarcus sp. (strain EbN1)).;"
OR_07182017_22_scaffold_113_20
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16594..17022)
DNA (429bp) protein (143aa)
hypothetical protein Tax=Methylosarcina fibrata RepID=UPI00036A4839
hypothetical protein
Tax=CG_Rhodof_02
OR_07182017_22_scaffold_113_21
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17082..17369)
DNA (288bp) protein (96aa)
Plasmid maintenance system antidote protein, XRE family Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L187_HALNC
plasmid maintenance system antidote protein
Plasmid maintenance system antidote protein, XRE family {ECO:0000313|EMBL:ACX96460.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_07182017_22_scaffold_113_22
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17697..19061)
DNA (1365bp) protein (455aa)
Putative uncharacterized protein Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L184_HALNC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACX96457.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_07182017_22_scaffold_113_23
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19165..19872)
DNA (708bp) protein (236aa)
Putative uncharacterized protein Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L183_HALNC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACX96456.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_07182017_22_scaffold_113_24
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19949..20356
DNA (408bp) protein (136aa)
Transcriptional regulator, XRE family Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L182_HALNC
XRE family transcriptional regulator
Transcriptional regulator, XRE family {ECO:0000313|EMBL:ACX96455.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_07182017_22_scaffold_113_25
BJP_IG2158_Actinobacteria_57_21, Bacteria

Not on your lists

20686..20883
DNA (198bp) protein (66aa)
Uncharacterized protein Tax=Shinella zoogloeoides DD12 RepID=V5EW06_9RHIZ
hypothetical protein
Tax=BJP_IG2158_Actinobacteria_57_21
OR_07182017_22_scaffold_113_26
unknown

Not on your lists

21171..21428
DNA (258bp) protein (86aa)

This feature has no annotations

OR_07182017_22_scaffold_113_27
Ectothiorhodospira sp. PHS-1, Ectothiorhodospira, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21458..21871
DNA (414bp) protein (138aa)
hypothetical protein Tax=Herbaspirillum lusitanum RepID=UPI00035F71A3
General secretion pathway protein G {ECO:0000313|EMBL:EHQ51895.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Ectothiorhodospira.;" source="Ectothiorhodospira sp. PHS-1.;"
secretion system protein G
OR_07182017_22_scaffold_113_28
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21927..22967
DNA (1041bp) protein (347aa)
P-type conjugative transfer ATPase TrbB Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L177_HALNC
P-type conjugative transfer ATPase TrbB
P-type conjugative transfer ATPase TrbB {ECO:0000313|EMBL:ACX96450.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_07182017_22_scaffold_113_29
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23083..23502
DNA (420bp) protein (140aa)
Conjugal transfer protein TrbC Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L174_HALNC
conjugal transfer protein Trbc
Conjugal transfer protein TrbC {ECO:0000313|EMBL:ACX96447.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_07182017_22_scaffold_113_30
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23559..23855
DNA (297bp) protein (99aa)
Conjugal transfer TrbD family protein Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L173_HALNC
conjugal transfer proteinTrbD
Conjugal transfer TrbD family protein {ECO:0000313|EMBL:ACX96446.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
Displaying items 1-30 of 49 in total

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