ggKbase home page

OR_07182017_22_scaffold_269

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_07182017_22_scaffold_269_1
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..286)
DNA (285bp) protein (95aa)
Elongation factor Tu Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KXH0_HALNC
translation elongation factor Tu
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_07182017_22_scaffold_269_trna_4
unknown

Not on your lists

comp(347..419)
DNA (73bp)
transferRNA Thr
OR_07182017_22_scaffold_269_trna_3
unknown

Not on your lists

comp(448..518)
DNA (71bp)
transferRNA Gly
OR_07182017_22_scaffold_269_trna_2
unknown

Not on your lists

comp(560..641)
DNA (82bp)
transferRNA Tyr
OR_07182017_22_scaffold_269_trna_1
unknown

Not on your lists

comp(731..803)
DNA (73bp)
transferRNA Thr
OR_07182017_22_scaffold_269_2
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(818..1687)
DNA (870bp) protein (290aa)
Type III pantothenate kinase {ECO:0000256|HAMAP-Rule:MF_01274}; EC=2.7.1.33 {ECO:0000256|HAMAP-Rule:MF_01274};; PanK-III {ECO:0000256|HAMAP-Rule:MF_01274}; Pantothenic acid kinase {ECO:0000256|HAMAP-Rule:MF_01274}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
Type III pantothenate kinase Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KXF7_HALNC
Baf family transcriptional regulator
OR_07182017_22_scaffold_269_3
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1684..2514)
DNA (831bp) protein (277aa)
Biotin/acetyl-CoA-carboxylase ligase Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KXF6_HALNC
biotin--acetyl-CoA-carboxylase ligase
Biotin/acetyl-CoA-carboxylase ligase {ECO:0000313|EMBL:ACX95170.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_07182017_22_scaffold_269_4
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2520..4307)
DNA (1788bp) protein (596aa)
Peptidase M61 domain protein Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KXF5_HALNC
peptidase M61 domain-containing protein
Peptidase M61 domain protein {ECO:0000313|EMBL:ACX95169.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_07182017_22_scaffold_269_5
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4304..4858)
DNA (555bp) protein (185aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915, ECO:0000256|RuleBase:RU004231}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
Peptidyl-prolyl cis-trans isomerase Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KXF4_HALNC
FKBP-type peptidylprolyl isomerase
OR_07182017_22_scaffold_269_6
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4883..5797)
DNA (915bp) protein (305aa)
Auxin Efflux Carrier Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KXF3_HALNC
hypothetical protein
Auxin Efflux Carrier {ECO:0000313|EMBL:ACX95167.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_07182017_22_scaffold_269_7
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5827..6204)
DNA (378bp) protein (126aa)
Thioredoxin Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KXF2_HALNC
thioredoxin
Thioredoxin {ECO:0000313|EMBL:ACX95166.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_07182017_22_scaffold_269_8
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6281..6916)
DNA (636bp) protein (212aa)
Peptidase S16 lon domain protein Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KXF1_HALNC
peptidase S16
Peptidase S16 lon domain protein {ECO:0000313|EMBL:ACX95165.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_07182017_22_scaffold_269_9
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6951..8327)
DNA (1377bp) protein (459aa)
UDP-N-acetylmuramate Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KXF0_HALNC
UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase
UDP-N-acetylmuramate {ECO:0000313|EMBL:ACX95164.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_07182017_22_scaffold_269_10
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8373..8903)
DNA (531bp) protein (177aa)
Putative uncharacterized protein Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KXE9_HALNC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACX95163.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_07182017_22_scaffold_269_11
Thiorhodococcus drewsii, Thiorhodococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9212..11740)
DNA (2529bp) protein (843aa)
Diguanylate cyclase/phosphodiesterase with GAF sensor Tax=Thiorhodococcus drewsii AZ1 RepID=G2E6B5_9GAMM
Diguanylate cyclase/phosphodiesterase with GAF sensor {ECO:0000313|EMBL:EGV28373.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiorhodococcus.;" source="Thiorhodococcus drewsii AZ1.;"
diguanylate cyclase/phosphodiesterase
OR_07182017_22_scaffold_269_12
RBG_13_Nitrospirae_43_8_curated, Nitrospirae, Bacteria

Not on your lists

comp(11742..12203)
DNA (462bp) protein (154aa)
hypothetical protein Tax=Geopsychrobacter electrodiphilus RepID=UPI00035D65A7
putative type II protein secretion system
Tax=RBG_13_Nitrospirae_43_8_curated
OR_07182017_22_scaffold_269_13
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12404..14608
DNA (2205bp) protein (735aa)
ATP-dependent DNA helicase RecQ Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KXE8_HALNC
ATP-dependent DNA helicase RecQ {ECO:0000313|EMBL:KJS04289.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium BRH_c0.;"
ATP-dependent DNA helicase RecQ
OR_07182017_22_scaffold_269_14
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14605..15249)
DNA (645bp) protein (215aa)
Undecaprenyl-diphosphatase {ECO:0000313|EMBL:ABD69474.1}; EC=3.6.1.27 {ECO:0000313|EMBL:ABD69474.1};; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118); (Albidiferax ferrireducens).;"
Undecaprenyl-diphosphatase Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21XM9_RHOFD
PA-phosphatase-like phosphoesterase
OR_07182017_22_scaffold_269_15
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15399..16541)
DNA (1143bp) protein (381aa)
FAD-dependent pyridine nucleotide-disulphide oxidoreductase Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KXE7_HALNC
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
FAD-dependent pyridine nucleotide-disulphide oxidoreductase {ECO:0000313|EMBL:ACX95161.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_07182017_22_scaffold_269_16
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16550..17269)
DNA (720bp) protein (240aa)
hydroxyacylglutathione hydrolase (EC:3.1.2.6)
Hydroxyacylglutathione hydrolase {ECO:0000313|EMBL:ACX95160.1}; EC=3.1.2.6 {ECO:0000313|EMBL:ACX95160.1};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
Hydroxyacylglutathione hydrolase Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KXE6_HALNC
OR_07182017_22_scaffold_269_17
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17480..18544
DNA (1065bp) protein (355aa)
Aminoglycoside phosphotransferase Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KXE5_HALNC
aminoglycoside phosphotransferase
Aminoglycoside phosphotransferase {ECO:0000313|EMBL:ACX95159.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_07182017_22_scaffold_269_18
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18679..19329)
DNA (651bp) protein (217aa)
Putative uncharacterized protein Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KXE4_HALNC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACX95158.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_07182017_22_scaffold_269_19
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19447..20523)
DNA (1077bp) protein (359aa)
Uncharacterized protein Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GAD4_ALIDK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:GAO24686.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
OR_07182017_22_scaffold_269_20
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20462..21919)
DNA (1458bp) protein (486aa)
Uncharacterized protein Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GAD4_ALIDK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB83489.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
OR_07182017_22_scaffold_269_21
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22278..22586)
DNA (309bp) protein (103aa)
ATP-dependent helicase HrpA Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KXD2_HALNC
ATP-dependent helicase HrpA
ATP-dependent helicase HrpA {ECO:0000313|EMBL:ACX95146.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_07182017_22_scaffold_269_22
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22624..23067)
DNA (444bp) protein (148aa)
ATP-dependent helicase HrpA Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KXD2_HALNC
ATP-dependent helicase HrpA
ATP-dependent helicase HrpA {ECO:0000313|EMBL:ACX95146.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
Displaying 26 items

View Taxonomy