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OR_07242016_13_scaffold_40

Search features with annotation key words

Displaying items 1-30 of 226 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_07242016_13_scaffold_40_1
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..284
DNA (282bp) protein (94aa)
Type II site-specific deoxyribonuclease Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4DC30_9GAMM
type II restriction endonuclease BsuBI
Type II restriction endonuclease BsuBI {ECO:0000313|EMBL:AHF01741.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
OR_07242016_13_scaffold_40_2
GWE2_Spirochaetes_31_10_curated, Spirochaetes, Bacteria

Not on your lists

369..842
DNA (474bp) protein (158aa)
id=2165823 bin=GWE2_Spirochaete_31_10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_Spirochaete_31_10 organism_group=Spirochaetes organism_desc=Good +
Tax=GWE2_Spirochaetes_31_10_curated
OR_07242016_13_scaffold_40_3
Salinisphaera shabanensis, Salinisphaera, Salinisphaerales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

934..1602
DNA (669bp) protein (223aa)
hypothetical protein Tax=Cycloclasticus pugetii RepID=UPI00037D84D4
Uncharacterized protein {ECO:0000313|EMBL:ERJ17989.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Salinisphaerales; Salinisphaeraceae; Salinisphaera.;" source="Salinisphaera shabanensis E1L3A.;"
hypothetical protein
OR_07242016_13_scaffold_40_4
Granulicella tundricola, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

1648..2379
DNA (732bp) protein (244aa)
Uncharacterized protein Tax=Acidobacterium sp. (strain MP5ACTX9) RepID=E8X829_ACISM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADW71613.1}; species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella tundricola (strain ATCC BAA-1859 / DSM 23138 / MP5ACTX9).;"
OR_07242016_13_scaffold_40_5
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2596..3285
DNA (690bp) protein (230aa)
Conjugal transfer protein Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L1B8_HALNC
Conjugal transfer protein
Conjugal transfer protein {ECO:0000313|EMBL:ACX96491.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_07242016_13_scaffold_40_6
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3300..4313
DNA (1014bp) protein (338aa)
P-type conjugative transfer protein TrbG Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L1B9_HALNC
P-type conjugative transfer protein TrbG
P-type conjugative transfer protein TrbG {ECO:0000313|EMBL:ACX96492.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_07242016_13_scaffold_40_7
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4317..5618
DNA (1302bp) protein (434aa)
Conjugation TrbI family protein Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L1C0_HALNC
conjugation TrbI family protein
Conjugation TrbI family protein {ECO:0000313|EMBL:ACX96493.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_07242016_13_scaffold_40_8
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5615..5968
DNA (354bp) protein (118aa)
Putative uncharacterized protein Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L1C1_HALNC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACX96494.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_07242016_13_scaffold_40_9
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5965..6768
DNA (804bp) protein (268aa)
Cobyrinic acid ac-diamide synthase Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L1C2_HALNC
cobyrinic acid ac-diamide synthase
Cobyrinic acid ac-diamide synthase {ECO:0000313|EMBL:ACX96495.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_07242016_13_scaffold_40_10
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6770..7810
DNA (1041bp) protein (347aa)
ParB-like partition protein Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L1C3_HALNC
parB-like partition protein
ParB-like partition protein {ECO:0000313|EMBL:ACX96496.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_07242016_13_scaffold_40_11
unknown

Not on your lists

7881..8123
DNA (243bp) protein (81aa)

This feature has no annotations

OR_07242016_13_scaffold_40_12
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8126..8407
DNA (282bp) protein (94aa)
Putative uncharacterized protein Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L1C4_HALNC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACX96497.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_07242016_13_scaffold_40_13
Burkholderia multivorans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8404..8673
DNA (270bp) protein (90aa)
Uncharacterized protein Tax=Burkholderia multivorans RepID=B9BQJ2_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EEE06887.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia multivorans CGD2.;"
hypothetical protein
OR_07242016_13_scaffold_40_14
Laribacter hongkongensis, Laribacter, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8670..9656)
DNA (987bp) protein (329aa)
Probable integrase/recombinase protein Tax=Laribacter hongkongensis (strain HLHK9) RepID=C1D8J3_LARHH
integrase/recombinase protein
Probable integrase/recombinase protein {ECO:0000313|EMBL:ACO74783.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Laribacter.;" source="Laribacter hongkongensis (strain HLHK9).;"
OR_07242016_13_scaffold_40_15
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9935..10168)
DNA (234bp) protein (78aa)
Lytic transglycosylase catalytic Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L164_HALNC
lytic transglycosylase
Lytic transglycosylase catalytic {ECO:0000313|EMBL:ACX96437.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_07242016_13_scaffold_40_16

Not on your lists

comp(10196..10939)
DNA (744bp) protein (248aa)
Transposase Tax=mine drainage metagenome RepID=E6QPU3_9ZZZZ
Transposase {ECO:0000313|EMBL:CBI09264.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
IstB domain-containing protein ATP-binding protein
OR_07242016_13_scaffold_40_17

Not on your lists

comp(10929..11246)
DNA (318bp) protein (106aa)
Transposase Tax=mine drainage metagenome RepID=E6QPU4_9ZZZZ
Transposase {ECO:0000313|EMBL:CBI09265.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
integrase catalytic subunit
OR_07242016_13_scaffold_40_18

Not on your lists

comp(11206..12306)
DNA (1101bp) protein (367aa)
Transposase Tax=mine drainage metagenome RepID=E6QPU4_9ZZZZ
Transposase {ECO:0000313|EMBL:CBI09265.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
integrase catalytic subunit
OR_07242016_13_scaffold_40_19
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13162..14316)
DNA (1155bp) protein (385aa)
ribonucleoside-diphosphate reductase (EC:1.17.4.1)
Ribonucleoside-diphosphate reductase subunit beta {ECO:0000256|PIRNR:PIRNR000355}; EC=1.17.4.1 {ECO:0000256|PIRNR:PIRNR000355};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
Ribonucleoside-diphosphate reductase subunit beta Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KZH2_HALNC
OR_07242016_13_scaffold_40_20
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14352..17240)
DNA (2889bp) protein (963aa)
Ribonucleoside-diphosphate reductase {ECO:0000256|RuleBase:RU003410}; EC=1.17.4.1 {ECO:0000256|RuleBase:RU003410};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
ribonucleotide-diphosphate reductase subunit alpha (EC:1.17.4.1)
Ribonucleoside-diphosphate reductase Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KZH3_HALNC
OR_07242016_13_scaffold_40_21
Desulfococcus multivorans, Desulfococcus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17787..18494)
DNA (708bp) protein (236aa)
ATP-binding protein Tax=Desulfococcus multivorans RepID=Q2N4Y0_DESML
ABC transporter ATP-binding protein
ATP-binding protein {ECO:0000313|EMBL:CAJ13814.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfococcus.;" source="Desulfococcus multivorans.;"
OR_07242016_13_scaffold_40_22
Sedimenticola sp. SIP-G1, Sedimenticola, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18496..19698)
DNA (1203bp) protein (401aa)
Uncharacterized protein Tax=gamma proteobacterium HdN1 RepID=E1VPG8_9GAMM
ABC transporter permease {ECO:0000313|EMBL:AKH21674.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Sedimenticola.;" source="Sedimenticola sp. SIP-G1.;"
hypothetical protein
OR_07242016_13_scaffold_40_23
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19695..20858)
DNA (1164bp) protein (388aa)
Efflux transporter, RND family, MFP subunit Tax=Desulfarculus baarsii (strain ATCC 33931 / DSM 2075 / VKM B-1802 / 2st14) RepID=E1QHX7_DESB2
RND family efflux transporter MFP subunit
Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
OR_07242016_13_scaffold_40_24
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20846..21466)
DNA (621bp) protein (207aa)
Transcriptional regulator, TetR family Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BTR0_DELAS
TetR family transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ABX35324.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
OR_07242016_13_scaffold_40_25
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21815..22822
DNA (1008bp) protein (336aa)
NAD-dependent epimerase/dehydratase Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KZH4_HALNC
NAD-dependent epimerase/dehydratase
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:ACX95847.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_07242016_13_scaffold_40_26
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22827..23834)
DNA (1008bp) protein (336aa)
Alcohol dehydrogenase zinc-binding domain protein Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L0I6_HALNC
alcohol dehydrogenase zinc-binding domain-containing protein
Alcohol dehydrogenase zinc-binding domain protein {ECO:0000313|EMBL:ACX96209.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_07242016_13_scaffold_40_27
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23874..24482)
DNA (609bp) protein (203aa)
Nitroreductase Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L0I5_HALNC
nitroreductase
Nitroreductase {ECO:0000313|EMBL:ACX96208.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_07242016_13_scaffold_40_28
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24531..25241)
DNA (711bp) protein (237aa)
Anti-ECFsigma factor, ChrR Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L0I4_HALNC
anti-ECF sigma factor ChrR
Anti-ECFsigma factor, ChrR {ECO:0000313|EMBL:ACX96207.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_07242016_13_scaffold_40_29
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25356..26240
DNA (885bp) protein (295aa)
Putative uncharacterized protein Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L1K4_HALNC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACX96577.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_07242016_13_scaffold_40_30
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26831..27385)
DNA (555bp) protein (185aa)
PAS sensor protein Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L0A3_HALNC
PAS sensor protein
PAS sensor protein {ECO:0000313|EMBL:ACX96126.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
Displaying items 1-30 of 226 in total

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