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OR_07242016_13_scaffold_35_26

Organism: OR_07242016_13_Halothiobacillus_neapolitanus_53_149

near complete RP 52 / 55 BSCG 51 / 51 ASCG 12 / 38 MC: 2
Location: 29356..31173

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoD Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KXZ4_HALNC similarity UNIREF
DB: UNIREF100
  • Identity: 90.8
  • Coverage: 608.0
  • Bit_score: 1063
  • Evalue 0.0
RNA polymerase sigma factor RpoD {ECO:0000256|HAMAP-Rule:MF_00963}; Sigma-70 {ECO:0000256|HAMAP-Rule:MF_00963}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.8
  • Coverage: 608.0
  • Bit_score: 1063
  • Evalue 0.0
RNA polymerase sigma-70 subunit RpoD similarity KEGG
DB: KEGG
  • Identity: 90.8
  • Coverage: 608.0
  • Bit_score: 1063
  • Evalue 0.0

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Taxonomy

Halothiobacillus neapolitanus → Halothiobacillus → Chromatiales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1818
ATGTACGAAGATAAGCAGGCCAGCATCAAAACACTCATCGCACACGGCCGCGAGCAGGGTTACTTAACCTACGCTGAAATCAGCGATCATTTGCCCGAATCCCTAGTGGATGCCGATCAGATCGAAGACATCATCGGCATGATTCAGGAAATGGGCATTACCGTCTCCGAGGTCGCCCCCGATAGTGATGACTTAGGCCTAGCCGATGAAGCGCGCGTCTCTAATGATGAAGATGCCACCGAAGAAGCCGTCGCCGTCCTCGCATCCCAAGTGGATGCCGAGTTTGGTCGCACCACCGACCCCGTGCGCATGTATATGCGCGAGATGGGCACGGTCGATTTGCTCAATCGCCAAGGCGAGATTGAAATTGCCAAGCGCATCGAAGAAGGCTTGCTCGATGTCACCCGCGCGCTGGCGTTTTATCCGCCCACCATCGAAATGCTGCTCGAATCCTATGCCCGCGTTGAAGCAGGCGATATGCGCCTACAAGATGTGATTGTCGGCATCATCGAGCCCGATATTGAAATCCCGCTTGAAGCCGAAGAAGCTCCGCTGGATGTGGTTGATGGCGATATCGCGGTCGCCGATGACGAAGAAGAAACCGAAGCTGAAGAAGAAGCGGTGGTCGATAACAGCTTAGACCCGGAATTGGTGCGTACCCATCTGCTCGCCATCAAAGAACTGGCCGTCCACCTCAATGACCGAAAGCCTGAGTATTTAACCCTGCTGGCCGATCAGCTGGTTCAACTCAAATTAAACCCCAATTTCAATGAAAAATTGCTGGCGCAAATTCGCCAAGCGATTGCCCGCATTCGCCTGCTTGAAAAGCAAATCATGCAGCAAGCCGTTGAAAAAGGCGGCTTAAAGCGCGAAACCTTTATCGAAGCCTTCCGCAGCCACGAATCGGACATCGGCTGGGTTGAGCTTGCCACTAAAGGCAAACCTACCGCCAAATTTATTCTCGTGCAGCCCGAAATCGAGCGCCTGCAAAAACGCCTCAACACGGTGGCGCGCGATAGCAAACTCACCGTGGCGCAAACCCGCGAAGTGCACCGCCTCATTACCTTGGGTGAGGCCAAAGCCCGCCGCGCCAAAAAAGAGATGATCGAAGCGAACTTGCGCCTCGTGATTTCGATTGCAAAAAAATACACCAACCGTGGCCTGCAATTTTTGGATTTAATCCAAGAAGGCAATATCGGCCTGATGAAAGCGGTGGATAAATTCGAATACCGGCGCGGTTATAAGTTTTCGACCTATGCCACCTGGTGGATTCGCCAAGCCATCACCCGCTCAATTGCCGACCAAGCGCGCACCATCCGCATCCCCGTGCACATGATCGAAACGATCAACAAGCTCAACCGCATCAGCCGGCAAATGCTGCAAGAAATGGGGCGCGAACCCACGCCTGAAGAGCTGGCCGTGCGCATGGATTTACCCGAAGATAAAATCCGCAAAGTGCTCAAAATCGCCAAAGAGCCCATTTCGATGGAAACCCCCATTGGTGAAGATGACGATTCCAACTTAGGCGATTTTATCGAAGATCAAAGCGCCATTTCCCCGATGGACTCGGCCACCAATGCCAGCTTGTCGGAAATTGTGCGCGAGATTTTAGCCTCACTTACCCCGCGTGAAGCCAAGGTATTGATGATGCGTTTTGGTATCGGCATGAACACCGACCACACGCTCGAGGAAGTCGGCAAGCAATTTGATGTCACCCGCGAACGCATTCGGCAAATCGAGGCCAAAGCACTGCGCAAATTACGTCATCCTTCCCGCTCAGAGCGCCTACGCAGTTTTATCGAGATGAATATCGACTAA
PROTEIN sequence
Length: 606
MYEDKQASIKTLIAHGREQGYLTYAEISDHLPESLVDADQIEDIIGMIQEMGITVSEVAPDSDDLGLADEARVSNDEDATEEAVAVLASQVDAEFGRTTDPVRMYMREMGTVDLLNRQGEIEIAKRIEEGLLDVTRALAFYPPTIEMLLESYARVEAGDMRLQDVIVGIIEPDIEIPLEAEEAPLDVVDGDIAVADDEEETEAEEEAVVDNSLDPELVRTHLLAIKELAVHLNDRKPEYLTLLADQLVQLKLNPNFNEKLLAQIRQAIARIRLLEKQIMQQAVEKGGLKRETFIEAFRSHESDIGWVELATKGKPTAKFILVQPEIERLQKRLNTVARDSKLTVAQTREVHRLITLGEAKARRAKKEMIEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKLNRISRQMLQEMGREPTPEELAVRMDLPEDKIRKVLKIAKEPISMETPIGEDDDSNLGDFIEDQSAISPMDSATNASLSEIVREILASLTPREAKVLMMRFGIGMNTDHTLEEVGKQFDVTRERIRQIEAKALRKLRHPSRSERLRSFIEMNID*