ggKbase home page

OR_11072017_0_5m_0_2um_scaffold_652

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
OR_11072017_0_5m_0_2um_scaffold_652_1
Sedimenticola sp. SIP-G1, Sedimenticola, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..881
-----------------
DNA (879bp)
protein (293aa)
CRISPR-associated endonuclease Cas1 n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9M9X7_ACIET
Uncharacterized protein {ECO:0000313|EMBL:AKH21523.1}; TaxID=1543721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Sedimenticola.;" source="Sedimenticola sp. SIP-G1.;"
hypothetical protein
OR_11072017_0_5m_0_2um_scaffold_652_2
Sedimenticola sp. SIP-G1, Sedimenticola, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

871..1203
-----------------
DNA (333bp)
protein (111aa)
CRISPR-associated endoribonuclease Cas2 n=1 Tax=uncultured bacterium RepID=K2F861_9BACT
CRISPR-associated protein Cas2 {ECO:0000313|EMBL:AKH21522.1}; TaxID=1543721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Sedimenticola.;" source="Sedimenticola sp. SIP-G1.;"
crispr-associated protein cas2
OR_11072017_0_5m_0_2um_scaffold_652_3
Neisseria sp. oral taxon 020, Neisseria, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1189..1518)
-----------------
DNA (330bp)
protein (110aa)
Uncharacterized protein n=1 Tax=Neisseria sp. oral taxon 020 str. F0370 RepID=L1NPU6_9NEIS
Uncharacterized protein {ECO:0000313|EMBL:EKY05549.1}; TaxID=1127694 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Neisseriaceae; Neisseria.;" source="Neisseria sp. oral taxon 020 str. F0370.;"
OR_11072017_0_5m_0_2um_scaffold_652_4
unknown

Not on your lists

comp(1529..2296)
-----------------
DNA (768bp)
protein (256aa)

This feature has no annotations

OR_11072017_0_5m_0_2um_scaffold_652_5
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2764..4071)
-----------------
DNA (1308bp)
protein (436aa)
Ammonium transporter n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KX45_HALNC
ammonium transporter
Ammonium transporter {ECO:0000256|RuleBase:RU362002}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_11072017_0_5m_0_2um_scaffold_652_6
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4084..4422)
-----------------
DNA (339bp)
protein (113aa)
Nitrogen regulatory protein P-II n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KX46_HALNC
nitrogen regulatory protein P-II
Nitrogen regulatory protein P-II {ECO:0000313|EMBL:ACX97166.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_11072017_0_5m_0_2um_scaffold_652_7
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4450..5244)
-----------------
DNA (795bp)
protein (265aa)
Putative uncharacterized protein n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KX47_HALNC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACX97167.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_11072017_0_5m_0_2um_scaffold_652_8
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5731..5982
-----------------
DNA (252bp)
protein (84aa)
Putative uncharacterized protein n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KXL3_HALNC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACX97201.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_11072017_0_5m_0_2um_scaffold_652_9
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6026..7537
-----------------
DNA (1512bp)
protein (504aa)
Mg chelatase, subunit ChlI n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KXL4_HALNC
Mg chelatase subunit ChlI
Mg chelatase, subunit ChlI {ECO:0000313|EMBL:ACX97202.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
OR_11072017_0_5m_0_2um_scaffold_652_10
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7543..8511)
-----------------
DNA (969bp)
protein (323aa)
tRNA (mo5U34)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01590, ECO:0000256|SAAS:SAAS00194472}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_01590, ECO:0000256|SAAS:SAAS00194476};; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
tRNA (mo5U34)-methyltransferase n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KXL5_HALNC
methyltransferase
OR_11072017_0_5m_0_2um_scaffold_652_11
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8511..9260)
-----------------
DNA (750bp)
protein (250aa)
tRNA (cmo5U34)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01589}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_01589};; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
tRNA (cmo5U34)-methyltransferase n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KXL6_HALNC
methyltransferase
OR_11072017_0_5m_0_2um_scaffold_652_12
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9458..10570)
-----------------
DNA (1113bp)
protein (371aa)
tRNA 2-selenouridine synthase {ECO:0000256|HAMAP-Rule:MF_01622, ECO:0000256|SAAS:SAAS00035454}; EC=2.9.1.- {ECO:0000256|HAMAP-Rule:MF_01622, ECO:0000256|SAAS:SAAS00035457};; Selenophosphate-dependent tRNA 2-selenouridine synthase {ECO:0000256|HAMAP-Rule:MF_01622}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
tRNA 2-selenouridine synthase n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KXL7_HALNC
tRNA 2-selenouridine synthase
OR_11072017_0_5m_0_2um_scaffold_652_13
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10570..11055)
-----------------
DNA (486bp)
protein (162aa)
Selenide, water dikinase {ECO:0000256|HAMAP-Rule:MF_00625, ECO:0000256|SAAS:SAAS00014883}; EC=2.7.9.3 {ECO:0000256|HAMAP-Rule:MF_00625, ECO:0000256|SAAS:SAAS00014883};; Selenium donor protein {ECO:0000256|HAMAP-Rule:MF_00625}; Selenophosphate synthase {ECO:0000256|HAMAP-Rule:MF_00625}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
Selenide, water dikinase n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KXL8_HALNC
selenide, water dikinase
Displaying 13 items

View Taxonomy