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B_1_S1_Biohub_coassembly_k141_2191120

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Displaying items 1-30 of 52 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
B_1_S1_Biohub_coassembly_k141_2191120_1
RBG_13_Chloroflexi_52_14_curated, Chloroflexi, Bacteria

Not on your lists

151..1377
DNA (1227bp) protein (409aa)
CoA-transferase family iii bin=bin7_NC10_sister species=Actinomadura madurae genus=Actinomadura taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin7_NC10_sister organism_group=NC10
putative acyl-CoA transferase/carnitine dehydratase
Tax=RBG_13_Chloroflexi_52_14_curated
B_1_S1_Biohub_coassembly_k141_2191120_2
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

1350..2618
DNA (1269bp) protein (423aa)
CoA-transferase family iii bin=bin7_NC10_sister species=Actinomadura madurae genus=Actinomadura taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin7_NC10_sister organism_group=NC10
L-carnitine dehydratase/bile acid-inducible protein F
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
B_1_S1_Biohub_coassembly_k141_2191120_3
RBG_16_Chloroflexi_57_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(2715..3170)
DNA (456bp) protein (152aa)
hypothetical protein bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
hypothetical protein
Tax=RBG_16_Chloroflexi_57_11_curated
B_1_S1_Biohub_coassembly_k141_2191120_4
Phytophthora infestans, Phytophthora, Peronosporales, Eukaryota

Not on your lists

3214..3819
DNA (606bp) protein (202aa)
Putative uncharacterized protein Tax=Phytophthora infestans (strain T30-4) RepID=D0NL39_PHYIT
Putative uncharacterized protein {ECO:0000313|EMBL:EEY60357.1}; species="Eukaryota; Stramenopiles; Oomycetes; Peronosporales; Phytophthora.;" source="Phytophthora infestans (strain T30-4) (Potato late blight fungus).;"
glutamate receptor
B_1_S1_Biohub_coassembly_k141_2191120_5
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3973..4737)
DNA (765bp) protein (255aa)
Enoyl-CoA hydratase {ECO:0000313|EMBL:ETX03267.1}; EC=4.2.1.17 {ECO:0000313|EMBL:ETX03267.1};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
enoyl-CoA hydratase (EC:4.2.1.17)
Enoyl-CoA hydratase Tax=Oceanicola batsensis HTCC2597 RepID=A3U153_9RHOB
B_1_S1_Biohub_coassembly_k141_2191120_6
RBG_16_Chloroflexi_57_8_curated, Chloroflexi, Bacteria

Not on your lists

comp(4886..6010)
DNA (1125bp) protein (375aa)
Uncharacterized protein Tax=Dehalococcoides mccartyi RepID=M1RB72_9CHLR
hypothetical protein
Tax=RBG_16_Chloroflexi_57_8_curated
B_1_S1_Biohub_coassembly_k141_2191120_7

Not on your lists

comp(6034..6570)
DNA (537bp) protein (179aa)
RNA polymerase, sigma-24 subunit, ECF subfamily Tax=Dehalogenimonas lykanthroporepellens (strain ATCC BAA-1523 / JCM 15061 / BL-DC-9) RepID=D8K1C5_DEHLB
Marine sediment metagenome DNA, contig: S03H2_S00766 {ECO:0000313|EMBL:GAH57556.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
ECF subfamily RNA polymerase, sigma-24 subunit
B_1_S1_Biohub_coassembly_k141_2191120_8
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(6686..7747)
DNA (1062bp) protein (354aa)
Hydrogenase maturation factor Tax=uncultured Chloroflexi bacterium HF0500_03M05 RepID=E0XY73_9CHLR
AIR synthase-like protein
Tax=GWA2_Rokubacteria_73_35_curated
B_1_S1_Biohub_coassembly_k141_2191120_9
Brevundimonas subvibrioides, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7912..8445
DNA (534bp) protein (178aa)
Putative uncharacterized protein Tax=Brevundimonas subvibrioides (strain ATCC 15264 / DSM 4735 / LMG 14903 / NBRC 16000 / CB 81) RepID=D9QIK2_BRESC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADL01335.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas subvibrioides (strain ATCC 15264 / DSM 4735 / LMG 14903; / NBRC 16000 / CB 81) (Caulobacter subvibrioides).;"
B_1_S1_Biohub_coassembly_k141_2191120_10
Luminiphilus syltensis, Luminiphilus, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8442..8849
DNA (408bp) protein (136aa)
hypothetical protein Tax=Sporichthya polymorpha RepID=UPI00037B84A6
Putative Fatty acid synthase subunit beta {ECO:0000313|EMBL:EED36131.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade; Luminiphilus.;" source="Luminiphilus syltensis NOR5-1B.;"
MaoC domain-containing protein dehydratase
B_1_S1_Biohub_coassembly_k141_2191120_11

Not on your lists

comp(8967..10151)
DNA (1185bp) protein (395aa)
Aminotransferase, class V Tax=Aneurinibacillus aneurinilyticus ATCC 12856 RepID=U1WGA6_ANEAE
Uncharacterized protein {ECO:0000313|EMBL:KKL06957.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
class V aminotransferase
B_1_S1_Biohub_coassembly_k141_2191120_12
BJP_IG2069_Chloroflexi_70_12, Chloroflexi, Bacteria

Not on your lists

comp(10320..11111)
DNA (792bp) protein (264aa)
hypothetical protein Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI00036BA46E
short-chain dehydrogenase
Tax=BJP_IG2069_Chloroflexi_70_12
B_1_S1_Biohub_coassembly_k141_2191120_13
RBG_19FT_COMBO_Chloroflexi_55_16_curated, Chloroflexi, Bacteria

Not on your lists

11251..12429
DNA (1179bp) protein (393aa)
Amidohydrolase Tax=Meiothermus silvanus (strain ATCC 700542 / DSM 9946 / VI-R2) RepID=D7BFD1_MEISD
amidohydrolase
Tax=RBG_19FT_COMBO_Chloroflexi_55_16_curated
B_1_S1_Biohub_coassembly_k141_2191120_14
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12538..13095)
DNA (558bp) protein (186aa)
UPI0003CFFDA7 related cluster Tax=unknown RepID=UPI0003CFFDA7
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
B_1_S1_Biohub_coassembly_k141_2191120_15
Peptococcaceae bacterium BRH_c23, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13115..13339)
DNA (225bp) protein (75aa)
UPI0003CFB664 related cluster Tax=unknown RepID=UPI0003CFB664
Uncharacterized protein {ECO:0000313|EMBL:KJS47639.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae.;" source="Peptococcaceae bacterium BRH_c23.;"
hypothetical protein
B_1_S1_Biohub_coassembly_k141_2191120_16
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(13332..14036)
DNA (705bp) protein (235aa)
Methyltransferase type 11 Tax=Chroococcidiopsis thermalis PCC 7203 RepID=K9U9T6_9CYAN
type 11 methyltransferase
Tax=RBG_16_Chloroflexi_68_14_curated
B_1_S1_Biohub_coassembly_k141_2191120_17
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14184..14762
DNA (579bp) protein (193aa)
UPI0003D03B9E related cluster Tax=unknown RepID=UPI0003D03B9E
TetR family transcriptional regulator {ECO:0000313|EMBL:ESZ20121.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
transcriptional regulator
B_1_S1_Biohub_coassembly_k141_2191120_trna_3
unknown

Not on your lists

comp(14848..14921)
DNA (74bp)
transferRNA Glu
B_1_S1_Biohub_coassembly_k141_2191120_18
RBG_13_RIF08_66_14_curated, RIF8, Bacteria

Not on your lists

comp(14993..15457)
DNA (465bp) protein (155aa)
hypothetical protein Tax=zeta proteobacterium SCGC AB-137-C09 RepID=UPI00036113E2
integral membrane protein
Tax=RBG_13_RIF08_66_14_curated
B_1_S1_Biohub_coassembly_k141_2191120_19
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists

comp(15460..15828)
DNA (369bp) protein (123aa)
C_GCAxxG_C_C family protein Tax=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) RepID=A3CSR0_METMJ
C_GCAxxG_C_C family protein
Tax=RBG_16_RIF_CHLX_70_13_curated
B_1_S1_Biohub_coassembly_k141_2191120_20
RBG_13_Chloroflexi_46_9_curated, Chloroflexi, Bacteria

Not on your lists

comp(16238..16618)
DNA (381bp) protein (127aa)
twitching motility protein PilT Tax=Acetobacter aceti RepID=UPI00022605B2
PilT protein domain-containing protein
Tax=RBG_13_Chloroflexi_46_9_curated
B_1_S1_Biohub_coassembly_k141_2191120_21
RBG_13_Chloroflexi_46_9_curated, Chloroflexi, Bacteria

Not on your lists

comp(16608..16841)
DNA (234bp) protein (78aa)
Uncharacterized protein Tax=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) RepID=B5ZG02_GLUDA
hypothetical protein
Tax=RBG_13_Chloroflexi_46_9_curated
B_1_S1_Biohub_coassembly_k141_2191120_22

Not on your lists

comp(17026..18552)
DNA (1527bp) protein (509aa)
Marine sediment metagenome DNA, contig: S12H4_L02703 {ECO:0000313|EMBL:GAI86603.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
B_1_S1_Biohub_coassembly_k141_2191120_trna_2
unknown

Not on your lists

comp(18705..18776)
DNA (72bp)
transferRNA Pseudo
B_1_S1_Biohub_coassembly_k141_2191120_23
unknown

Not on your lists

comp(19029..19241)
DNA (213bp) protein (71aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_2191120_trna_1
unknown

Not on your lists

comp(19298..19371)
DNA (74bp)
transferRNA Glu
B_1_S1_Biohub_coassembly_k141_2191120_24
RBG_16_Chloroflexi_64_32_curated, Chloroflexi, Bacteria

Not on your lists

comp(19382..20416)
DNA (1035bp) protein (345aa)
N-acetyl-gamma-glutamyl-phosphate reductase (EC:1.2.1.38)
hypothetical protein Tax=Chloroflexi bacterium SCGC AB-629-P13 RepID=UPI000376899E
Tax=RBG_16_Chloroflexi_64_32_curated
B_1_S1_Biohub_coassembly_k141_2191120_25
unknown

Not on your lists

20948..21337
DNA (390bp) protein (130aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_2191120_26
R_OD1_48_14, Parcubacteria, Bacteria

Not on your lists

21321..24290
DNA (2970bp) protein (990aa)
hypothetical protein Tax=Bacteria RepID=UPI0003772849
membrane protein-like protein
Tax=RIFCSPLOWO2_01_FULL_OD1_48_14_curated
B_1_S1_Biohub_coassembly_k141_2191120_27
R_OD1_48_14, Parcubacteria, Bacteria

Not on your lists

24295..25608
DNA (1314bp) protein (438aa)
hypothetical protein bin=ACD9 species=ACD9 genus=ACD9 taxon_order=ACD9 taxon_class=ACD9 phylum=OD1-i tax=ACD9 organism_group=OD1-i organism_desc=OD1-i
hypothetical protein
Tax=RIFCSPLOWO2_01_FULL_OD1_48_14_curated
Displaying items 1-30 of 52 in total

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