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B_1_S1_Biohub_coassembly_k141_5417384

Search features with annotation key words

Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
B_1_S1_Biohub_coassembly_k141_5417384_1
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2..1453)
DNA (1452bp) protein (484aa)
Asparagine synthase Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GA39_GEOUR
asparagine synthase
Asparagine synthase {ECO:0000313|EMBL:ABQ25547.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
B_1_S1_Biohub_coassembly_k141_5417384_2
GWC2_Pelobacteraceae_58_13_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1605..2516
DNA (912bp) protein (304aa)
Putative uncharacterized protein bin=GWC2_Pelobacter_58_13 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
hypothetical protein
Tax=GWC2_Pelobacteraceae_58_13_curated
B_1_S1_Biohub_coassembly_k141_5417384_3
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2532..3041)
DNA (510bp) protein (170aa)
GCN5-related N-acetyltransferase Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GA40_GEOUR
N-acetyltransferase GCN5
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ABQ25548.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
B_1_S1_Biohub_coassembly_k141_5417384_4
Intrasporangium oryzae, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3100..3651)
DNA (552bp) protein (184aa)
Tail Collar domain-containing protein Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HYU4_9RHIZ
Tail collar protein {ECO:0000313|EMBL:EWT02092.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium oryzae NRRL B-24470.;"
phage tail collar domain-containing protein
B_1_S1_Biohub_coassembly_k141_5417384_5
Shewanella oneidensis, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3678..4190)
DNA (513bp) protein (171aa)
Microcystin dependent MdpB family protein Tax=Shewanella oneidensis (strain MR-1) RepID=Q8EKB0_SHEON
microcystin dependent MdpB family protein
Microcystin dependent MdpB family protein {ECO:0000313|EMBL:AAN53272.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewanella oneidensis (strain MR-1).;"
B_1_S1_Biohub_coassembly_k141_5417384_6
Ruegeria sp. TM1040, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4195..4743)
DNA (549bp) protein (183aa)
Phage Tail Collar Tax=Ruegeria sp. (strain TM1040) RepID=Q1GM56_RUEST
phage tail Collar
Phage Tail Collar {ECO:0000313|EMBL:ABF62260.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Ruegeria sp. (strain TM1040) (Silicibacter sp.).;"
B_1_S1_Biohub_coassembly_k141_5417384_7
GWC2_Pelobacteraceae_58_13_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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4869..5723
DNA (855bp) protein (285aa)
Hpr(Ser) kinase/phosphatase bin=GWC2_Pelobacter_58_13 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
hypothetical protein
Tax=GWC2_Pelobacteraceae_58_13_curated
B_1_S1_Biohub_coassembly_k141_5417384_8
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5744..6598
DNA (855bp) protein (285aa)
Sulfotransferase Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GA47_GEOUR
sulfotransferase
Sulfotransferase {ECO:0000313|EMBL:ABQ25555.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
B_1_S1_Biohub_coassembly_k141_5417384_9
GWC2_Geobacteraceae_53_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6638..6940
DNA (303bp) protein (101aa)
Uncharacterized protein Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TH07_TISMK
hypothetical protein
Tax=GWC2_Geobacteraceae_53_11_curated
B_1_S1_Biohub_coassembly_k141_5417384_10
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7131..8321
DNA (1191bp) protein (397aa)
Uncharacterized protein {ECO:0000313|EMBL:KGM33524.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
B_1_S1_Biohub_coassembly_k141_5417384_11
unknown

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8457..10256
DNA (1800bp) protein (600aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_5417384_12
unknown

Not on your lists

comp(10272..11393)
DNA (1122bp) protein (374aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_5417384_13
unknown

Not on your lists

comp(11437..11793)
DNA (357bp) protein (119aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_5417384_14
unknown

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comp(11825..12085)
DNA (261bp) protein (87aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_5417384_15
unknown

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comp(12749..13198)
DNA (450bp) protein (150aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_5417384_16
unknown

Not on your lists

comp(13288..13755)
DNA (468bp) protein (156aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_5417384_17
RBG_16_Chloroflexi_57_11_curated, Chloroflexi, Bacteria

Not on your lists

14094..24620
DNA (10527bp) protein (3509aa)
hypothetical protein Tax=candidate division WS3 bacterium JGI 0000059-A10 RepID=UPI0003642B5A
hypothetical protein
Tax=RBG_16_Chloroflexi_57_11_curated
B_1_S1_Biohub_coassembly_k141_5417384_18
GWC2_Elusimicrobia_64_44_curated, Elusimicrobia, Bacteria

Not on your lists

24829..26412
DNA (1584bp) protein (528aa)
Gll3854 protein bin=GWC2_Elusimicrobia_64_44 species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GWC2_Elusimicrobia_64_44 organism_group=Elusimicrobia organism_desc=Good
hypothetical protein
Tax=GWC2_Elusimicrobia_64_44_curated
B_1_S1_Biohub_coassembly_k141_5417384_19
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

26409..27590
DNA (1182bp) protein (394aa)
Glycosyl transferase, group 1 bin=GWA2_Methylomirabilis_73_35 species=Oscillatoria sp. PCC 6506 genus=Oscillatoria taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Glycosyl transferase, group 1
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
B_1_S1_Biohub_coassembly_k141_5417384_20
Paenibacillus dendritiformis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(27717..28517)
DNA (801bp) protein (267aa)
hypothetical protein Tax=Brevibacillus laterosporus RepID=UPI00037E369F
Uncharacterized protein {ECO:0000313|EMBL:EHQ60690.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus dendritiformis C454.;"
hypothetical protein
B_1_S1_Biohub_coassembly_k141_5417384_21
Thermosipho africanus, Thermosipho, Thermotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists

comp(28514..29362)
DNA (849bp) protein (283aa)
Membrane protein, putative Tax=Thermosipho africanus RepID=B7IGB7_THEAB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKF48563.1}; species="Bacteria; Thermotogae; Thermotogales; Fervidobacteriaceae; Thermosipho.;" source="Thermosipho africanus H17ap60334.;"
B_1_S1_Biohub_coassembly_k141_5417384_22
Streptomyces sp. NTK 937, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29359..30357)
DNA (999bp) protein (333aa)
ABC transporter, ATP-binding protein Tax=Sorangium cellulosum (strain So ce56) RepID=A9GT98_SORC5
Methionine ABC transporter ATP-binding protein {ECO:0000313|EMBL:KDQ67090.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. NTK 937.;"
ABC transporter ATP-binding protein
B_1_S1_Biohub_coassembly_k141_5417384_23
unknown

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30502..33456
DNA (2955bp) protein (985aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_5417384_24
GWC2_OP9X_49_35_curated, OP9X, Bacteria

Not on your lists

33456..34403
DNA (948bp) protein (316aa)
Binding-protein-dependent transport systems inner membrane component Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TRN0_9CHLR
binding-protein-dependent transport system inner membrane protein
Tax=GWC2_OP9X_49_35_curated
B_1_S1_Biohub_coassembly_k141_5417384_25
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

34400..35353
DNA (954bp) protein (318aa)
hypothetical protein
Putative N-acetylglucosamine kinase bin=GWA2_Ignavibacteria_55_11 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
Tax=RBG_16_Acidobacteria_70_10_curated
B_1_S1_Biohub_coassembly_k141_5417384_26
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

35346..36335
DNA (990bp) protein (330aa)
N-acetylmuramic acid 6-phosphate etherase {ECO:0000256|HAMAP-Rule:MF_00068, ECO:0000256|SAAS:SAAS00085795}; Short=MurNAc-6-P etherase {ECO:0000256|HAMAP-Rule:MF_00068};; EC=4.2.1.126 {ECO:0000256|HAMAP-Rule:MF_00068, ECO:0000256|SAAS:SAAS00085795};; N-acetylmuramic acid 6-phosphate hydrolase {ECO:0000256|HAMAP-Rule:MF_00068}; N-acetylmuramic acid 6-phosphate lyase {ECO:0000256|HAMAP-Rule:MF_00068}; species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
N-acetylmuramic acid 6-phosphate etherase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6W7_GEMAT
hypothetical protein
B_1_S1_Biohub_coassembly_k141_5417384_27
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36350..38005
DNA (1656bp) protein (552aa)
Putative lipoprotein Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CLG6_MYXFH
putative lipoprotein
Putative lipoprotein {ECO:0000313|EMBL:AEI66490.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus fulvus (strain ATCC BAA-855 / HW-1).;"
B_1_S1_Biohub_coassembly_k141_5417384_28
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

38015..39208
DNA (1194bp) protein (398aa)
hypothetical protein Tax=unclassified candidate division EM 19 RepID=UPI00035EEC0B
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
B_1_S1_Biohub_coassembly_k141_5417384_29
Paenibacillus beijingensis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

39190..40734
DNA (1545bp) protein (515aa)
Beta-N-acetylhexosaminidase {ECO:0000256|SAAS:SAAS00114579}; EC=3.2.1.52 {ECO:0000256|SAAS:SAAS00114579};; species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus beijingensis.;"
beta-glucosidase
Beta-glucosidase-related glycosidase bin=GWC2_ACD39_50_8 species=Paenibacillus elgii genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_ACD39_50_8 organism_group=ACD39
B_1_S1_Biohub_coassembly_k141_5417384_30
R_Acidobacteria_67_28, Acidobacteria, Bacteria

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40893..41522
DNA (630bp) protein (210aa)
protein-L-isoaspartate o-methyltransferase (EC:2.1.1.77)
hypothetical protein Tax=Hydrogenedentes bacterium JGI 0000039-J10 RepID=UPI000369AD2A
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
Displaying items 1-30 of 43 in total

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