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B_1_S1_Biohub_coassembly_k141_771778

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Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
B_1_S1_Biohub_coassembly_k141_771778_1
unknown

Not on your lists

comp(79..447)
DNA (369bp) protein (123aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_771778_2
Paenibacillus polymyxa, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(449..1459)
DNA (1011bp) protein (337aa)
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473};; species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus polymyxa (strain E681).;"
B_1_S1_Biohub_coassembly_k141_771778_3

Not on your lists

1473..1979
DNA (507bp) protein (169aa)
Uncharacterized protein {ECO:0000313|EMBL:KKO03473.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
B_1_S1_Biohub_coassembly_k141_771778_4
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1999..2313)
DNA (315bp) protein (105aa)
Uncharacterized protein {ECO:0000313|EMBL:ABQ25626.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
B_1_S1_Biohub_coassembly_k141_771778_5
CG_Arma_01, Armatimonadetes, Bacteria

Not on your lists

comp(2419..3630)
DNA (1212bp) protein (404aa)
Tax=CG_Arma_01
B_1_S1_Biohub_coassembly_k141_771778_6
CG_Arma_01, Armatimonadetes, Bacteria

Not on your lists

comp(3630..4277)
DNA (648bp) protein (216aa)
Tax=CG_Arma_01
B_1_S1_Biohub_coassembly_k141_771778_7
Candidatus Brocadia sinica, Candidatus Brocadia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(4384..4848)
DNA (465bp) protein (155aa)
Transcriptional repressor NrdR {ECO:0000256|HAMAP-Rule:MF_00440, ECO:0000256|SAAS:SAAS00087559}; species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Brocadia.;" source="Candidatus Brocadia sinica JPN1.;"
B_1_S1_Biohub_coassembly_k141_771778_8
unknown

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5043..6026
DNA (984bp) protein (328aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_771778_9
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(6041..7336)
DNA (1296bp) protein (432aa)
tRNA modification GTPase MnmE {ECO:0000256|HAMAP-Rule:MF_00379}; EC=3.6.-.- {ECO:0000256|HAMAP-Rule:MF_00379};; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
B_1_S1_Biohub_coassembly_k141_771778_10
RBG_16_RIF03_38_10_curated, RIF03, Bacteria

Not on your lists

comp(7353..9113)
DNA (1761bp) protein (587aa)
Tax=RBG_16_RIF03_38_10_curated
B_1_S1_Biohub_coassembly_k141_771778_11
RBG_16_RIF03_38_10_curated, RIF03, Bacteria

Not on your lists

comp(9121..9393)
DNA (273bp) protein (91aa)
Tax=RBG_16_RIF03_38_10_curated
B_1_S1_Biohub_coassembly_k141_771778_12
Methylacidiphilum kamchatkense, Methylacidiphilum, Methylacidiphilales, Verrucomicrobia, Bacteria

Not on your lists

9688..9924
DNA (237bp) protein (79aa)
Ferredoxin {ECO:0000313|EMBL:KIE57945.1}; species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia; Methylacidiphilales; Methylacidiphilaceae; Methylacidiphilum.;" source="Methylacidiphilum kamchatkense Kam1.;"
B_1_S1_Biohub_coassembly_k141_771778_13
RBG_16_Chloroflexi_48_7_curated, Chloroflexi, Bacteria

Not on your lists

10170..11159
DNA (990bp) protein (330aa)
Tax=RBG_16_Chloroflexi_48_7_curated
B_1_S1_Biohub_coassembly_k141_771778_14
RBG_13_Deltaproteobacteria_65_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11156..12448
DNA (1293bp) protein (431aa)
Tax=RBG_13_Deltaproteobacteria_65_10_curated
B_1_S1_Biohub_coassembly_k141_771778_15
unknown

Not on your lists

comp(12452..13867)
DNA (1416bp) protein (472aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_771778_16
unknown

Not on your lists

comp(13864..14448)
DNA (585bp) protein (195aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_771778_17

Not on your lists

comp(14506..15372)
DNA (867bp) protein (289aa)
Uncharacterized protein {ECO:0000313|EMBL:KKN29597.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
B_1_S1_Biohub_coassembly_k141_771778_18
RBG_16_Zixibacteria_48_11_curated, Zixibacteria, Bacteria

Not on your lists

15653..17026
DNA (1374bp) protein (458aa)
Tax=RBG_16_Zixibacteria_48_11_curated
B_1_S1_Biohub_coassembly_k141_771778_19
unknown

Not on your lists

comp(17040..18236)
DNA (1197bp) protein (399aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_771778_20
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

18276..18893
DNA (618bp) protein (206aa)
Uncharacterized protein {ECO:0000313|EMBL:ACZ40459.1}; species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
B_1_S1_Biohub_coassembly_k141_771778_21
RBG_19FT_COMBO_Aminicenantes_58_17_curated, Aminicenantes, Bacteria

Not on your lists

comp(19543..20427)
DNA (885bp) protein (295aa)
Tax=RBG_19FT_COMBO_Aminicenantes_58_17_curated
B_1_S1_Biohub_coassembly_k141_771778_22
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(20433..20927)
DNA (495bp) protein (165aa)
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
B_1_S1_Biohub_coassembly_k141_771778_23
RIFOXYD12_FULL_Chloroflexi_57_15_curated, Chloroflexi, Bacteria

Not on your lists

comp(20928..21272)
DNA (345bp) protein (115aa)
Tax=RIFOXYD12_FULL_Chloroflexi_57_15_curated
B_1_S1_Biohub_coassembly_k141_771778_24
unknown

Not on your lists

comp(21332..21556)
DNA (225bp) protein (75aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_771778_25
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(21678..22013)
DNA (336bp) protein (112aa)
Tax=CSP1_5_NC10
B_1_S1_Biohub_coassembly_k141_771778_26
Paenibacillus beijingensis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(22016..22324)
DNA (309bp) protein (103aa)
2Fe-2S ferredoxin {ECO:0000313|EMBL:AJY75614.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus beijingensis.;"
B_1_S1_Biohub_coassembly_k141_771778_27
RBG_16_Deltaproteobacteria_71_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22561..24762)
DNA (2202bp) protein (734aa)
Tax=RBG_16_Deltaproteobacteria_71_12_curated
Displaying 27 items

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