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B_1_S1_Biohub_coassembly_k141_957841

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
B_1_S1_Biohub_coassembly_k141_957841_1
unknown

Not on your lists

comp(35..748)
DNA (714bp) protein (238aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_957841_2
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

958..3765
DNA (2808bp) protein (936aa)
protein kinase (EC:2.7.11.1)
Protein kinase {ECO:0000313|EMBL:CAN90469.1}; EC=2.7.11.1 {ECO:0000313|EMBL:CAN90469.1};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
Protein kinase Tax=Sorangium cellulosum (strain So ce56) RepID=A9GQM9_SORC5
B_1_S1_Biohub_coassembly_k141_957841_3
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(3770..5056)
DNA (1287bp) protein (429aa)
hemL; glutamate-1-semialdehyde-2,1-aminomutase (EC:5.4.3.8)
Glutamate-1-semialdehyde 2,1-aminomutase bin=GWC2_Methylomirabilis_70_16 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
B_1_S1_Biohub_coassembly_k141_957841_4
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5251..6228)
DNA (978bp) protein (326aa)
hypothetical protein bin=GWF1_Burkholderiales_GWF1_66_17 species=Thauera sp. 63 genus=Thauera taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
B_1_S1_Biohub_coassembly_k141_957841_5
unknown

Not on your lists

comp(6463..7029)
DNA (567bp) protein (189aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_957841_6
CG_Elusi_02, Elusimicrobia, Bacteria

Not on your lists

7138..8235
DNA (1098bp) protein (366aa)
arabinose kinase bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Leptospira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=CG_Elusi_02
B_1_S1_Biohub_coassembly_k141_957841_7
unknown

Not on your lists

8418..8600
DNA (183bp) protein (61aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_957841_8
RBG_16_Aminicenantes_66_30_curated, Aminicenantes, Bacteria

Not on your lists

comp(8665..9153)
DNA (489bp) protein (163aa)
hypothetical protein Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI000376CB7F
GTP-binding protein
Tax=RBG_16_Aminicenantes_66_30_curated
B_1_S1_Biohub_coassembly_k141_957841_9
Gimesia maris, Gimesia, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(9179..9442)
DNA (264bp) protein (88aa)
Uncharacterized protein Tax=Planctomyces maris DSM 8797 RepID=A6CDN5_9PLAN
Uncharacterized protein {ECO:0000313|EMBL:EDL57228.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;"
anti-sigma-28 factor FlgM
B_1_S1_Biohub_coassembly_k141_957841_10
R_Planctomycetes_50_16, Planctomycetes, Bacteria

Not on your lists

9743..11758
DNA (2016bp) protein (672aa)
Uncharacterized protein Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DAX3_SINAD
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Planctomycetes_50_16_curated
B_1_S1_Biohub_coassembly_k141_957841_11
RBG_16_Planctomycetes_43_13_curated, Planctomycetes, Bacteria

Not on your lists

11776..13530
DNA (1755bp) protein (585aa)
Putative uncharacterized protein bin=GWC2_ACD39_50_8 species=Thermobaculum terrenum genus=Thermobaculum taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_ACD39_50_8 organism_group=ACD39
hypothetical protein
Tax=RBG_16_Planctomycetes_43_13_curated
B_1_S1_Biohub_coassembly_k141_957841_12
Anaeromyxobacter sp. K, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13538..14251)
DNA (714bp) protein (238aa)
FHA domain containing protein Tax=Anaeromyxobacter sp. (strain K) RepID=B4UAU3_ANASK
FHA domain-containing protein
FHA domain containing protein {ECO:0000313|EMBL:ACG74612.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain K).;"
B_1_S1_Biohub_coassembly_k141_957841_13
Pirellula staleyi, Pirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

14533..15594
DNA (1062bp) protein (354aa)
Uncharacterized protein Tax=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) RepID=D2R6S2_PIRSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB17372.1}; Flags: Precursor;; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Pirellula.;" source="Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) (Pirella; staleyi).;"
B_1_S1_Biohub_coassembly_k141_957841_14
RBG_16_Planctomycetes_64_12_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

15638..16645
DNA (1008bp) protein (336aa)
hypothetical protein Tax=Gemmata obscuriglobus RepID=UPI00016C57A4
hypothetical protein
Tax=RBG_16_Planctomycetes_64_12_curated
B_1_S1_Biohub_coassembly_k141_957841_15
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(16919..17704)
DNA (786bp) protein (262aa)
MazG family protein bin=GWC2_Nitrospirae-rel_56_14 species=Thermosediminibacter oceani genus=Thermosediminibacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
pyrophosphatase
Tax=RBG_16_Nitrospirae_64_22_curated
B_1_S1_Biohub_coassembly_k141_957841_16
Pirellula staleyi, Pirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(17701..20196)
DNA (2496bp) protein (832aa)
Uncharacterized protein Tax=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) RepID=D2R2P5_PIRSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB16885.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Pirellula.;" source="Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) (Pirella; staleyi).;"
B_1_S1_Biohub_coassembly_k141_957841_17
RBG_16_Planctomycetes_59_8_curated, Planctomycetes, Bacteria

Not on your lists

20481..21692
DNA (1212bp) protein (404aa)
Serine/threonine protein kinase Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0D956_SINAD
serine/threonine protein kinase
Tax=RBG_16_Planctomycetes_59_8_curated
B_1_S1_Biohub_coassembly_k141_957841_18
RBG_16_Planctomycetes_59_8_curated, Planctomycetes, Bacteria

Not on your lists

21705..22379
DNA (675bp) protein (225aa)
Uncharacterized protein Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9B199_HERA2
hypothetical protein
Tax=RBG_16_Planctomycetes_59_8_curated
B_1_S1_Biohub_coassembly_k141_957841_19
unknown

Not on your lists

comp(22408..23466)
DNA (1059bp) protein (353aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_957841_20
unknown

Not on your lists

comp(23486..23839)
DNA (354bp) protein (118aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_957841_21
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24172..25212)
DNA (1041bp) protein (347aa)
Phosphoesterase, RecJ-like protein Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IPU6_ANADE
phosphoesterase, RecJ-like
Tax=RBG_16_Anaeromyxobacter_69_14_curated
B_1_S1_Biohub_coassembly_k141_957841_22
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

25414..26307
DNA (894bp) protein (298aa)
lipA; lipoyl synthase (EC:2.8.1.-)
Lipoyl synthase Tax=Sorangium cellulosum (strain So ce56) RepID=LIPA_SORC5
Tax=RBG_16_Archaea_50_20_curated
B_1_S1_Biohub_coassembly_k141_957841_23
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

26304..27416
DNA (1113bp) protein (371aa)
3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) bin=GWC2_Proteo_65_14_Ab886 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
3-methyl-2-oxobutanoate dehydrogenase subunit alpha
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
B_1_S1_Biohub_coassembly_k141_957841_24
R_Deltaproteobacteria_38_15, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27425..28402
DNA (978bp) protein (326aa)
transketolase central region; K00167 2-oxoisovalerate dehydrogenase E1 component, beta subunit [EC:1.2.4.4] bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
transketolase central region
Tax=RIFCSPHIGHO2_02_FULL_Deltaproteobacteria_38_15_curated
B_1_S1_Biohub_coassembly_k141_957841_25
uncultured Acetothermia bacterium, Acetothermia, Bacteria

Not on your lists

28585..29940
DNA (1356bp) protein (452aa)
Pyruvate dehydrogenase E2 component (Dihydrolipoamide acetyltransferase) Tax=uncultured candidate division OP1 bacterium RepID=H5SJG6_9BACT
Pyruvate dehydrogenase E2 component (Dihydrolipoamide acetyltransferase) {ECO:0000313|EMBL:BAL56302.1}; species="Bacteria; Acetothermia; environmental samples.;" source="uncultured Acetothermia bacterium.;"
pyruvate dehydrogenase E2
B_1_S1_Biohub_coassembly_k141_957841_26
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

29937..31088
DNA (1152bp) protein (384aa)
3-methyl-2-oxobutanoate dehydrogenase subunit alpha bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
3-methyl-2-oxobutanoate dehydrogenase subunit alpha
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
B_1_S1_Biohub_coassembly_k141_957841_27
RBG_16_Actinobacteria_64_13_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31303..31509)
DNA (207bp) protein (69aa)
hypothetical protein Tax=Calothrix sp. PCC 7103 RepID=UPI000381E997
hypothetical protein
Tax=RBG_16_Actinobacteria_64_13_curated
B_1_S1_Biohub_coassembly_k141_957841_28
GWF2_Lentisphaerae_52_8_curated, Lentisphaerae, Bacteria

Not on your lists

31623..32429
DNA (807bp) protein (269aa)
id=4612070 bin=GWF2_Lentisphaerae_52_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Lentisphaerae_52_8 organism_group=Lentisphaerae
hypothetical protein
Tax=GWF2_Lentisphaerae_52_8_curated
B_1_S1_Biohub_coassembly_k141_957841_29
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32452..33324
DNA (873bp) protein (291aa)
Uncharacterized protein Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UFU5_MYXSD
Uncharacterized protein {ECO:0000313|EMBL:EYR67123.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
hypothetical protein
B_1_S1_Biohub_coassembly_k141_957841_30
Anaeromyxobacter sp. PSR-1, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33545..34939
DNA (1395bp) protein (465aa)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. PSR-1.;"
Dihydrolipoyl dehydrogenase Tax=uncultured candidate division OP1 bacterium RepID=H5SUR8_9BACT
dihydrolipoamide dehydrogenase
Displaying items 1-30 of 40 in total

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