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B_1_S1_Biohub_coassembly_k141_3891714

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
B_1_S1_Biohub_coassembly_k141_3891714_1
unknown

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1..615
DNA (615bp) protein (205aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_3891714_2
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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713..1258
DNA (546bp) protein (182aa)
hypothetical protein Tax=Comamonas testosteroni RepID=UPI0003640A19
Zn-finger domain associated with topoisomerase type I
Zn-finger domain associated with topoisomerase type I {ECO:0000313|EMBL:AIJ47237.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni TK102.;"
B_1_S1_Biohub_coassembly_k141_3891714_3
unknown

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comp(1623..2417)
DNA (795bp) protein (265aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_3891714_4
unknown

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comp(2427..2693)
DNA (267bp) protein (89aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_3891714_5
Bos taurus, Bos, Mammalia, Chordata, Metazoa

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2694..3590
DNA (897bp) protein (299aa)
PREDICTED: glutamine-rich protein 2 isoform X1 Tax=Bos taurus RepID=UPI000383D854
Uncharacterized protein {ECO:0000313|Ensembl:ENSBTAP00000018337}; Flags: Fragment;; species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Cetartiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos.;" source="Bos taurus (Bovine).;"
B_1_S1_Biohub_coassembly_k141_3891714_6
RBG_13_Planctomycetes_50_24_curated, Physcisphaerae, Planctomycetes, Bacteria

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3587..5593
DNA (2007bp) protein (669aa)
hypothetical protein Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI000373E7FD
Multi-sensor signal transduction histidine kinase
Tax=RBG_13_Planctomycetes_50_24_curated
B_1_S1_Biohub_coassembly_k141_3891714_7
RIFOXYB12_FULL_Lentisphaerae_65_16_curated, Lentisphaerae, Bacteria

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5590..6945
DNA (1356bp) protein (452aa)
Sigma-54 dependent transcriptional regulator/response regulator Tax=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) RepID=Q3AB09_CARHZ
Fis family transcriptional regulator
Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
B_1_S1_Biohub_coassembly_k141_3891714_8
GWC2_Elusimicrobia_61_19_curated, Elusimicrobia, Bacteria

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7199..7525
DNA (327bp) protein (109aa)
Tax=GWC2_Elusimicrobia_61_19_curated
B_1_S1_Biohub_coassembly_k141_3891714_9
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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7528..8019
DNA (492bp) protein (164aa)
Tax=RBG_16_Euryarchaeota_68_13_curated
B_1_S1_Biohub_coassembly_k141_3891714_10
unknown

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8127..8267
DNA (141bp) protein (47aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_3891714_11
unknown

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comp(8230..8871)
DNA (642bp) protein (214aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_3891714_12
unknown

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comp(9055..9363)
DNA (309bp) protein (103aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_3891714_13

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9616..10836
DNA (1221bp) protein (407aa)
Rhodopirellula transposase Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DCW7_SINAD bin=16ft_combo_ws3_JS1 species=Singulisphaera acidiphila genus=Singulisphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Marine sediment metagenome DNA, contig: S01H1_L01587 {ECO:0000313|EMBL:GAF82425.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Rhodopirellula transposase
B_1_S1_Biohub_coassembly_k141_3891714_14
RBG_16_Planctomycetes_43_13_curated, Planctomycetes, Bacteria

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11332..12972
DNA (1641bp) protein (547aa)
ccoO; cb-type cytochrome c oxidase subunit II (EC:1.9.3.1)
putative nitrate reductase gamma subunit bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
Tax=RBG_16_Planctomycetes_43_13_curated
B_1_S1_Biohub_coassembly_k141_3891714_15
CSP1_5_NC10, NC10, Bacteria

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12986..13942
DNA (957bp) protein (319aa)
hypothetical protein bin=bin3_NC10 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin3_NC10 organism_group=NC10
hypothetical protein
Tax=CSP1_5_NC10
B_1_S1_Biohub_coassembly_k141_3891714_16
RLO_Entotheonella_69_37, Entotheonella, Bacteria

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13956..15941
DNA (1986bp) protein (662aa)
nxrA1; putative nitrate oxidoreductase subunit alpha (EC:1.7.99.4)
Nitrate oxidoreductase alpha subunit NarG bin=GWF2_Methylomirabilis_70_14 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_12_FULL_Entotheonella_69_37_curated
Displaying 16 items

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