ggKbase home page

B_1_S1_Biohub_coassembly_k141_4426424

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
B_1_S1_Biohub_coassembly_k141_4426424_1
R_Nitrospirae_66_17, Nitrospirae, Bacteria

Not on your lists

comp(135..1256)
DNA (1122bp) protein (374aa)
Putative thiazole biosynthetic enzyme Tax=Candidatus Nitrospira defluvii RepID=D8PC63_9BACT
putative thiazole biosynthesis enzyme
Tax=RIFCSPHIGHO2_01_FULL_Nitrospirae_66_17_curated
B_1_S1_Biohub_coassembly_k141_4426424_2
RBG_13_Deltaproteobacteria_65_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1256..2632)
DNA (1377bp) protein (459aa)
Phosphomethylpyrimidine synthase Tax=Sorangium cellulosum So0157-2 RepID=S4XZ35_SORCE
phosphomethylpyrimidine synthase
Tax=RBG_13_Deltaproteobacteria_65_10_curated
B_1_S1_Biohub_coassembly_k141_4426424_3
unknown

Not on your lists

3159..3938
DNA (780bp) protein (260aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_4426424_4
unknown

Not on your lists

3935..4720
DNA (786bp) protein (262aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_4426424_5
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

4734..5297
DNA (564bp) protein (188aa)
CBS protein Tax=uncultured bacterium RepID=K1YFJ3_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
B_1_S1_Biohub_coassembly_k141_4426424_6
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5459..6457)
DNA (999bp) protein (333aa)
Biotin synthase {ECO:0000255|HAMAP-Rule:MF_01694}; EC=2.8.1.6 {ECO:0000255|HAMAP-Rule:MF_01694};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA).;"
Biotin synthase Tax=Geobacter sulfurreducens RepID=BIOB_GEOSL
bioB; biotin synthase
B_1_S1_Biohub_coassembly_k141_4426424_7
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6520..7599)
DNA (1080bp) protein (360aa)
8-amino-7-oxononanoate synthase {ECO:0000255|HAMAP-Rule:MF_01693}; Short=AONS {ECO:0000255|HAMAP-Rule:MF_01693};; EC=2.3.1.47 {ECO:0000255|HAMAP-Rule:MF_01693};; 7-keto-8-amino-pelargonic acid synthase {ECO:0000255|HAMAP-Rule:MF_01693}; Short=7-KAP synthase {ECO:0000255|HAMAP-Rule:MF_01693};; Short=KAPA synthase;; 8-amino-7-ketopelargonate synthase {ECO:0000255|HAMAP-Rule:MF_01693}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain Fw109-5).;"
8-amino-7-oxononanoate synthase Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=BIOF_ANADF
8-amino-7-oxononanoate synthase
B_1_S1_Biohub_coassembly_k141_4426424_8
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

7774..8817
DNA (1044bp) protein (348aa)
WD40 domain protein beta Propeller Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HEA1_ANADF
WD40 domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
B_1_S1_Biohub_coassembly_k141_4426424_9

Not on your lists

8923..9393
DNA (471bp) protein (157aa)
hypothetical protein Tax=Zavarzinella formosa RepID=UPI0002F57B28
Uncharacterized protein {ECO:0000313|EMBL:KKK48715.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
transcription elongation factor GreA
B_1_S1_Biohub_coassembly_k141_4426424_10
unknown

Not on your lists

comp(9593..9976)
DNA (384bp) protein (128aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_4426424_11
RBG_16_Aminicenantes_66_30_curated, Aminicenantes, Bacteria

Not on your lists

10189..11181
DNA (993bp) protein (331aa)
multi-sensor signal transduction histidine kinase bin=RBG_16_Aminicenantes_66_30 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_16_Aminicenantes_66_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
integral membrane sensor signal transduction histidine kinase
Tax=RBG_16_Aminicenantes_66_30_curated
B_1_S1_Biohub_coassembly_k141_4426424_12
Isosphaera pallida, Isosphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

11202..12560
DNA (1359bp) protein (453aa)
Two component, sigma54 specific, transcriptional regulator, Fis family Tax=Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B) RepID=E8QXL5_ISOPI
Fis family two component sigma54 specific transcriptional regulator
Two component, sigma54 specific, transcriptional regulator, Fis family {ECO:0000313|EMBL:ADV63063.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Isosphaera.;" source="Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B).;"
B_1_S1_Biohub_coassembly_k141_4426424_13
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(12778..14562)
DNA (1785bp) protein (595aa)
Peroxiredoxin Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DN27_SINAD
peroxiredoxin
Peroxiredoxin {ECO:0000313|EMBL:AGA30076.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
B_1_S1_Biohub_coassembly_k141_4426424_14
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(14572..16356)
DNA (1785bp) protein (595aa)
alkyl hydroperoxide reductase Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B4D87E
peroxiredoxin
Peroxiredoxin {ECO:0000313|EMBL:AGA30076.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
B_1_S1_Biohub_coassembly_k141_4426424_15
RBG_16_Planctomycetes_43_13_curated, Planctomycetes, Bacteria

Not on your lists

16686..18176
DNA (1491bp) protein (497aa)
hypothetical protein Tax=Hydrogenedentes bacterium JGI 0000039-J10 RepID=UPI00037BCA02
HD-GYP domain-containing protein
Tax=RBG_16_Planctomycetes_43_13_curated
B_1_S1_Biohub_coassembly_k141_4426424_16
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

18225..19583
DNA (1359bp) protein (453aa)
Putative uncharacterized protein bin=GWC2_Nitrospirae_57_13 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
putative transporter
Tax=CG_Woesearch_01
B_1_S1_Biohub_coassembly_k141_4426424_17
unknown

Not on your lists

comp(19586..20695)
DNA (1110bp) protein (370aa)

This feature has no annotations

Displaying 17 items

View Taxonomy