ggKbase home page

B_1_S1_Biohub_coassembly_k141_4428610

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
B_1_S1_Biohub_coassembly_k141_4428610_1
GWA2_Deltaproteobacteria_45_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13..2328)
DNA (2316bp) protein (772aa)
protein kinase (EC:2.7.11.1)
Protein kinase Tax=Sorangium cellulosum (strain So ce56) RepID=A9F816_SORC5
Tax=GWA2_Deltaproteobacteria_45_12_curated
B_1_S1_Biohub_coassembly_k141_4428610_2
unknown

Not on your lists

comp(2430..3266)
DNA (837bp) protein (279aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_4428610_3
unknown

Not on your lists

comp(3263..3808)
DNA (546bp) protein (182aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_4428610_4
RIFOXYB12_FULL_Lentisphaerae_65_16_curated, Lentisphaerae, Bacteria

Not on your lists

comp(3949..5424)
DNA (1476bp) protein (492aa)
Hydrogenase, membrane subunit 1-like protein (EchA-like) bin=GWA2_Elusimicrobia_69_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
HyfB; hydrogenase 4 subunit F
Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
B_1_S1_Biohub_coassembly_k141_4428610_5
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria

Not on your lists

comp(5424..6068)
DNA (645bp) protein (215aa)
NAD-dependent dehydrogenase subunit bin=GWA2_Elusimicrobia_69_24 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
NAD-dependent dehydrogenase subunit
Tax=GWA2_Elusimicrobia_69_24_curated
B_1_S1_Biohub_coassembly_k141_4428610_6
RIFOXYB12_FULL_Lentisphaerae_65_16_curated, Lentisphaerae, Bacteria

Not on your lists

comp(6074..6985)
DNA (912bp) protein (304aa)
NAD-dependent dehydrogenase subunit bin=GWC2_ACD39_50_8 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_ACD39_50_8 organism_group=ACD39
ehrB; Ech-hydrogenase-related complex, NuoH-like integral membrane subunit
Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
B_1_S1_Biohub_coassembly_k141_4428610_7
RifOxyA12_full_Proteobacteria_58_15_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6985..9096)
DNA (2112bp) protein (704aa)
Hydrogenase-4 component B Tax=uncultured candidate division OP1 bacterium RepID=H5SSS3_9BACT
hyfB; protein HyfB
Tax=RifOxyA12_full_Proteobacteria_58_15_curated
B_1_S1_Biohub_coassembly_k141_4428610_8
Pseudomonas alcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9157..9858)
DNA (702bp) protein (234aa)
hypothetical protein Tax=Armatimonadetes bacterium JGI 0000077-K19 RepID=UPI0003B4843A
Uncharacterized protein {ECO:0000313|EMBL:EQM70724.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas alcaligenes OT 69.;"
hypothetical protein
B_1_S1_Biohub_coassembly_k141_4428610_9
Thermoplasmatales archaeon SCGC AB-540-F20, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

9992..11794
DNA (1803bp) protein (601aa)
Aldehyde:ferredoxin oxidoreductase Tax=Thermoplasmatales archaeon SCGC AB-540-F20 RepID=M7TDF4_9EURY
Aldehyde:ferredoxin oxidoreductase {ECO:0000313|EMBL:EMR74848.1}; species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales.;" source="Thermoplasmatales archaeon SCGC AB-540-F20.;"
aldehyde:ferredoxin oxidoreductase
B_1_S1_Biohub_coassembly_k141_4428610_10
unknown

Not on your lists

comp(11850..12194)
DNA (345bp) protein (115aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_4428610_11
Ammonifex degensii, Ammonifex, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12565..14679)
DNA (2115bp) protein (705aa)
Elongation factor G Tax=Ammonifex degensii (strain DSM 10501 / KC4) RepID=C9R8J3_AMMDK
translation elongation factor G
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorella group; Ammonifex.;" source="Ammonifex degensii (strain DSM 10501 / KC4).;"
B_1_S1_Biohub_coassembly_k141_4428610_12
GWA2_WOR_2_45_18_curated, WOR-2, Bacteria

Not on your lists

15055..16179
DNA (1125bp) protein (375aa)
SH3 domain protein bin=GWC2_OP3-like_45_7 species=[Clostridium] difficile genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_OP3-like_45_7 organism_group=OP3 (Omnitrophica)
hypothetical protein
Tax=GWA2_WOR_2_45_18_curated
B_1_S1_Biohub_coassembly_k141_4428610_13
RBG_16_Planctomycetes_59_8_curated, Planctomycetes, Bacteria

Not on your lists

16792..18345
DNA (1554bp) protein (518aa)
Ribonuclease Y bin=GWF2_Planctomycetes_50_10 species=Planctomyces brasiliensis genus=Planctomyces taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_Planctomycetes_50_10 organism_group=Planctomycetes
ribonuclease
Tax=RBG_16_Planctomycetes_59_8_curated
Displaying 13 items

View Taxonomy