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B_1_S1_Biohub_coassembly_k141_4497188

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
B_1_S1_Biohub_coassembly_k141_4497188_1
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

Not on your lists

comp(2..466)
DNA (465bp) protein (155aa)
FHA domain-containing protein bin=GWF2_Lentisphaerae_57_35 species=Myxococcus stipitatus genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
signal transduction histidine kinase
Tax=GWF2_Lentisphaerae_57_35_curated
B_1_S1_Biohub_coassembly_k141_4497188_2
RBG_16_Planctomycetes_59_8_curated, Planctomycetes, Bacteria

Not on your lists

comp(730..4569)
DNA (3840bp) protein (1280aa)
Tax=RBG_16_Planctomycetes_59_8_curated
B_1_S1_Biohub_coassembly_k141_4497188_3
BJP_IG2102_ACD39_51_10, ACD39, Bacteria

Not on your lists

comp(4731..6251)
DNA (1521bp) protein (507aa)
hypothetical protein Tax=Schlesneria paludicola RepID=UPI00029A76F3
hypothetical protein
Tax=BJP_IG2102_ACD39_51_10
B_1_S1_Biohub_coassembly_k141_4497188_4
RBG_16_Gammaproteobacteria_66_13_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6412..6657
DNA (246bp) protein (82aa)
Tax=RBG_16_Gammaproteobacteria_66_13_curated
B_1_S1_Biohub_coassembly_k141_4497188_5
RBG_16_Gammaproteobacteria_66_13_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6654..7055
DNA (402bp) protein (134aa)
id=3258370 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RBG_16_Gammaproteobacteria_66_13_curated
B_1_S1_Biohub_coassembly_k141_4497188_6
Natronobacterium gregoryi, Natronobacterium, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7295..11371
DNA (4077bp) protein (1359aa)
Pyrrolo-quinoline quinone Tax=Natronobacterium gregoryi (strain ATCC 43098 / CCM 3738 / NCIMB 2189 / SP2) RepID=L0AEG3_NATGS
WD40-like repeat protein
Pyrrolo-quinoline quinone {ECO:0000313|EMBL:ELY66752.1}; WD40-like repeat protein {ECO:0000313|EMBL:AFZ71450.1}; species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronobacterium.;" source="Natronobacterium gregoryi (strain ATCC 43098 / CCM 3738 / NCIMB 2189 /; SP2).;"
B_1_S1_Biohub_coassembly_k141_4497188_trna_1
unknown

Not on your lists

comp(11410..11483)
DNA (74bp)
transferRNA Met
B_1_S1_Biohub_coassembly_k141_4497188_7
RBG_16_Planctomycetes_59_8_curated, Planctomycetes, Bacteria

Not on your lists

comp(11700..12074)
DNA (375bp) protein (125aa)
Tax=RBG_16_Planctomycetes_59_8_curated
B_1_S1_Biohub_coassembly_k141_4497188_8
unknown

Not on your lists

12292..12864
DNA (573bp) protein (191aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_4497188_9
Isosphaera pallida, Isosphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(12869..13324)
DNA (456bp) protein (152aa)
FHA domain containing protein Tax=Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B) RepID=E8R1R6_ISOPI
FHA domain-containing protein
FHA domain containing protein {ECO:0000313|EMBL:ADV61338.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Isosphaera.;" source="Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B).;"
B_1_S1_Biohub_coassembly_k141_4497188_10
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(13330..14481)
DNA (1152bp) protein (384aa)
Kynureninase {ECO:0000313|EMBL:CDM66962.1}; EC=3.7.1.3 {ECO:0000313|EMBL:CDM66962.1};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
kynureninase (EC:3.7.1.3)
Kynureninase Tax=Solibacter usitatus (strain Ellin6076) RepID=Q023I5_SOLUE
B_1_S1_Biohub_coassembly_k141_4497188_11
Pontibacillus marinus, Pontibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(14715..15398)
DNA (684bp) protein (228aa)
Tryptophan 23-dioxygenase Tax=Brevibacillus borstelensis AK1 RepID=M8E557_9BACL
Tryptophan 2 3-dioxygenase (Vermilion)-like protein {ECO:0000313|EMBL:KGX84118.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Pontibacillus.;" source="Pontibacillus marinus BH030004 = DSM 16465.;"
tryptophan 2 3-dioxygenase (vermilion)-like protein
B_1_S1_Biohub_coassembly_k141_4497188_12
Halorhodospira halophila, Halorhodospira, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15579..17885
DNA (2307bp) protein (769aa)
Heavy metal translocating P-type ATPase Tax=Halorhodospira halophila (strain DSM 244 / SL1) RepID=A1WZ37_HALHL
heavy metal translocating P-type ATPase
Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:ABM62949.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Halorhodospira.;" source="Halorhodospira halophila (strain DSM 244 / SL1) (Ectothiorhodospira; halophila (strain DSM 244 / SL1)).;"
B_1_S1_Biohub_coassembly_k141_4497188_13
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18113..18667
DNA (555bp) protein (185aa)
Sulfate adenylyltransferase Tax=Sorangium cellulosum So0157-2 RepID=S4Y0S4_SORCE
sulfate adenylyltransferase
Sulfate adenylyltransferase {ECO:0000313|EMBL:AGP39092.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
B_1_S1_Biohub_coassembly_k141_4497188_14
RBG_16_Deltaproteobacteria_54_18_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18649..19497
DNA (849bp) protein (283aa)
phosphoesterase Tax=Thermodesulfatator atlanticus RepID=UPI0003B79FAD
PHP domain-containing protein
Tax=RBG_16_Deltaproteobacteria_54_18_curated
B_1_S1_Biohub_coassembly_k141_4497188_15
Chthonomonas calidirosea, Chthonomonas, Chthonomonadales, Chthonomonadetes, Armatimonadetes, Bacteria

Not on your lists

19494..20180
DNA (687bp) protein (229aa)
phosphoadenylylsulfate reductase (thioredoxin) (EC:1.8.4.8)
Phosphoadenosine phosphosulfate reductase {ECO:0000256|HAMAP-Rule:MF_00063}; EC=1.8.4.8 {ECO:0000256|HAMAP-Rule:MF_00063, ECO:0000313|EMBL:CCW34981.1};; 3'-phosphoadenylylsulfate reductase {ECO:0000256|HAMAP-Rule:MF_00063}; PAPS reductase, thioredoxin dependent {ECO:0000256|HAMAP-Rule:MF_00063}; PAPS sulfotransferase {ECO:0000256|HAMAP-Rule:MF_00063}; PAdoPS reductase {ECO:0000256|HAMAP-Rule:MF_00063}; species="Bacteria; Armatimonadetes; Chthonomonadetes; Chthonomonadales; Chthonomonadaceae; Chthonomonas.;" source="Chthonomonas calidirosea (strain DSM 23976 / ICMP 18418 / T49).;"
Phosphoadenosine phosphosulfate reductase Tax=Chthonomonas calidirosea T49 RepID=S0ETT3_9BACT
B_1_S1_Biohub_coassembly_k141_4497188_16
unknown

Not on your lists

comp(20313..20843)
DNA (531bp) protein (177aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_4497188_17
unknown

Not on your lists

comp(21021..22199)
DNA (1179bp) protein (393aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_4497188_18
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

22726..23919
DNA (1194bp) protein (398aa)
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
Putative ribosome biogenesis GTPase RsgA Tax=Lentisphaera araneosa HTCC2155 RepID=A6DJW3_9BACT
Ribosome small subunit-stimulated GTPase EngC
B_1_S1_Biohub_coassembly_k141_4497188_19

Not on your lists

comp(23961..24161)
DNA (201bp) protein (67aa)
YcfA family protein bin=GWA2_Elusimicrobia_66_18 species=Methanomethylovorans hollandica genus=Methanomethylovorans taxon_order=Methanosarcinales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
Marine sediment metagenome DNA, contig: S12H4_S15383 {ECO:0000313|EMBL:GAJ13100.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
putative periplasmic or secreted lipoprotein
B_1_S1_Biohub_coassembly_k141_4497188_20
RBG_16_Deltaproteobacteria_54_18_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24191..24424)
DNA (234bp) protein (78aa)
hypothetical protein Tax=Chlorogloeopsis RepID=UPI00030B353F
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_54_18_curated
B_1_S1_Biohub_coassembly_k141_4497188_21
Thermococcus sp. AM4, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(24615..26624)
DNA (2010bp) protein (670aa)
Beta-galactosidase Tax=Thermococcus sp. AM4 RepID=B7QZN2_9EURY
beta-galactosidase
Beta-galactosidase {ECO:0000313|EMBL:EEB74590.1}; species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus sp. AM4.;"
B_1_S1_Biohub_coassembly_k141_4497188_22
unknown

Not on your lists

26765..28021
DNA (1257bp) protein (419aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_4497188_23
Plesiocystis pacifica, Plesiocystis, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28131..29183
DNA (1053bp) protein (351aa)
hypothetical protein Tax=Oscillatoria sp. PCC 10802 RepID=UPI0003715EDC
Uncharacterized protein {ECO:0000313|EMBL:EDM74914.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Nannocystaceae; Plesiocystis.;" source="Plesiocystis pacifica SIR-1.;"
metallophosphoesterase
B_1_S1_Biohub_coassembly_k141_4497188_24
Mesorhizobium sp. LNHC220B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29209..29424)
DNA (216bp) protein (72aa)
UPI0003CE9690 related cluster Tax=unknown RepID=UPI0003CE9690
Uncharacterized protein {ECO:0000313|EMBL:ESY84037.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC220B00.;"
hypothetical protein
B_1_S1_Biohub_coassembly_k141_4497188_25
Rhodobacter sp. AKP1, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29700..30299)
DNA (600bp) protein (200aa)
Uncharacterized protein Tax=Rhodobacter sp. AKP1 RepID=L1KE37_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EKX58663.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sp. AKP1.;"
hypothetical protein
B_1_S1_Biohub_coassembly_k141_4497188_26
unknown

Not on your lists

comp(30303..31001)
DNA (699bp) protein (233aa)
hypothetical protein Tax=Lamprocystis purpurea RepID=UPI00036984E4
B_1_S1_Biohub_coassembly_k141_4497188_27
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(31093..31617)
DNA (525bp) protein (175aa)
Putative uncharacterized protein Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01NF1_SOLUE
Polyketide cyclase/dehydrase
Polyketide cyclase/dehydrase {ECO:0000313|EMBL:AHG93884.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
B_1_S1_Biohub_coassembly_k141_4497188_28
unknown

Not on your lists

32220..35060
DNA (2841bp) protein (947aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_4497188_29
RBG_16_Planctomycetes_59_8_curated, Planctomycetes, Bacteria

Not on your lists

35087..36760
DNA (1674bp) protein (558aa)
id=1770729 bin=GWE2_OD1_46_68 species=GWE2_OD1_46_68 genus=GWE2_OD1_46_68 taxon_order=GWE2_OD1_46_68 taxon_class=GWE2_OD1_46_68 phylum=OD1 tax=GWE2_OD1_46_68 organism_group=OD1 (Parcubacteria)
Tax=RBG_16_Planctomycetes_59_8_curated
Displaying 30 items

View Taxonomy